RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 RBM8AQ9Y5S9 174 aaKnown RBP5.77□□□□□ -1.49
SCN1A-201ENST00000303395 ZMYM6O95789 1325 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 ARHGAP10A1A4S6 786 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 TROVE2P10155 538 aaKnown RBP eCLIP5.77□□□□□ -1.49
SCN1A-201ENST00000303395 PRAM1Q96QH2 718 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 UBA5Q9GZZ9 404 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 GGNBP2Q9H3C7 697 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 CREB3L3Q68CJ9 461 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 MFSD6Q6ZSS7 791 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 FOXP1Q9H334 677 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-201ENST00000303395 POTEFA5A3E0 1075 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 AREL1O15033 823 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 LPXNO60711 386 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 POTEIP0CG38 1075 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 LONP1P36776 959 aaKnown RBP5.77□□□□□ -1.49
SCN1A-201ENST00000303395 POTEEQ6S8J3 1075 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 HS2ST1Q7LGA3 356 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 SYCP3Q8IZU3 236 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 HPS3Q969F9 1004 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 OPTNQ96CV9 577 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 CENPKQ9BS16 269 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 ANGEL1Q9UNK9 670 aaKnown RBP5.77□□□□□ -1.49
SCN1A-201ENST00000303395 USP16Q9Y5T5 823 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 ADCY2Q08462 1091 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 CCDC122Q5T0U0 273 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 ARHGEF18Q6ZSZ5 1173 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 OSCARQ8IYS5 282 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 CRACR2BQ8N4Y2 399 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-201ENST00000303395 IGSF22Q8N9C0 903 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 ANGPTL2Q9UKU9 493 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 KCNH3Q9ULD8 1083 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 SATB2Q9UPW6 733 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 DCTN3O75935 186 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 GUCY2CP25092 1073 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 RWDD2BP57060 319 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 SYDE1Q6ZW31 735 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-201ENST00000303395 UBE3BQ7Z3V4 1068 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 C6orf50Q9HD87 102 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 ZSCAN32Q9NX65 697 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 PFASO15067 1338 aa5.77□□□□□ -1.49
SCN1A-201ENST00000303395 GRM8O00222 908 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 GTPBP6O43824 516 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-201ENST00000303395 PDE6AP16499 860 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 PTGS1P23219 599 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 ICA1Q05084 483 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 CCDC197Q8NCU1 140 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 TEKT1Q969V4 418 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 CARD10Q9BWT7 1032 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 TSPYL2Q9H2G4 693 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-201ENST00000303395 MIS18AQ9NYP9 233 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 NRXN1Q9ULB1 1477 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 CIAO1O76071 339 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 GCFC2P16383 781 aaKnown RBP5.76□□□□□ -1.49
SCN1A-201ENST00000303395 CDK17Q00537 523 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 WDR93Q6P2C0 686 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 CCDC13Q8IYE1 715 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 AOPEPQ8N6M6 819 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 TSR2Q969E8 191 aaKnown RBP5.76□□□□□ -1.49
SCN1A-201ENST00000303395 BICD1Q96G01 975 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 TTC25Q96NG3 672 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 TMOD4Q9NZQ9 345 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 TBCAO75347 108 aaKnown RBP5.76□□□□□ -1.49
SCN1A-201ENST00000303395 SNRPA1P09661 255 aaKnown RBP5.76□□□□□ -1.49
SCN1A-201ENST00000303395 PRLRP16471 622 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 AK2P54819 239 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 GABPAQ06546 454 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 C16orf72Q14CZ0 275 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 RTN1Q16799 776 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 NUDT16Q96DE0 195 aaKnown RBP5.76□□□□□ -1.49
SCN1A-201ENST00000303395 TRIM55Q9BYV6 548 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 SLITRK6Q9H5Y7 841 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 ABCF3Q9NUQ8 709 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 STK17AQ9UEE5 414 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 MYO9BQ13459 2157 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 GOLGA8MH3BSY2 632 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 FAM13AO94988 1023 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 PAK1Q13153 545 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 PRPF4BQ13523 1007 aaKnown RBP5.76□□□□□ -1.49
SCN1A-201ENST00000303395 MCM10Q7L590 875 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 VSTM4Q8IW00 320 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 MAGEC3Q8TD91 643 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 CBX8Q9HC52 389 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 TBC1D7Q9P0N9 293 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 ADGRB3O60242 1522 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 ZNF608Q9ULD9 1512 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-201ENST00000303395 OVOS2A0A0J9YW53 1432 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 OVOS2Q6IE36 1432 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 ATP8B3O60423 1300 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 NLRP6P59044 892 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 IFIT5Q13325 482 aaKnown RBP5.76□□□□□ -1.49
SCN1A-201ENST00000303395 KHDRBS2Q5VWX1 349 aaKnown RBP5.76□□□□□ -1.49
SCN1A-201ENST00000303395 EXOC7Q9UPT5 735 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 PLEKHG3A1L390 1219 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 MYO1CO00159 1063 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 RGL2O15211 777 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 KRT13P13646 458 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 HSPA13P48723 471 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 BPIFB4P59827 614 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 SLC39A14Q15043 492 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 PPP1R42Q7Z4L9 355 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms