RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 BACH1O14867 736 aa12.4□□□□□ -0.43
GCN1-201ENST00000300648 ARHGEF18Q6ZSZ5 1173 aa12.4□□□□□ -0.43
GCN1-201ENST00000300648 WAPLQ7Z5K2 1190 aa12.4□□□□□ -0.43
GCN1-201ENST00000300648 IFT122Q9HBG6 1241 aa12.4□□□□□ -0.43
GCN1-201ENST00000300648 NEO1Q92859 1461 aa12.39□□□□□ -0.43
GCN1-201ENST00000300648 MAP3K7CLP57077 242 aa12.39□□□□□ -0.43
GCN1-201ENST00000300648 CASC4Q6P4E1 433 aa12.39□□□□□ -0.43
GCN1-201ENST00000300648 LRRC2Q9BYS8 371 aa12.39□□□□□ -0.43
GCN1-201ENST00000300648 XAB2Q9HCS7 855 aaKnown RBP12.39□□□□□ -0.43
GCN1-201ENST00000300648 ATP5HO75947 161 aa12.39□□□□□ -0.43
GCN1-201ENST00000300648 CALCRLQ16602 461 aa12.39□□□□□ -0.43
GCN1-201ENST00000300648 ALS2CLQ60I27 953 aa12.39□□□□□ -0.43
GCN1-201ENST00000300648 VPS37BQ9H9H4 285 aa12.39□□□□□ -0.43
GCN1-201ENST00000300648 CCDC151A5D8V7 595 aa12.39□□□□□ -0.43
GCN1-201ENST00000300648 VPS16Q9H269 839 aa12.39□□□□□ -0.43
GCN1-201ENST00000300648 ANGPTL3Q9Y5C1 460 aa12.39□□□□□ -0.43
GCN1-201ENST00000300648 PSPC1Q8WXF1 523 aaKnown RBP12.39□□□□□ -0.43
GCN1-201ENST00000300648 LCMT1Q9UIC8 334 aa12.39□□□□□ -0.43
GCN1-201ENST00000300648 HADHQ16836 314 aaKnown RBP12.39□□□□□ -0.43
GCN1-201ENST00000300648 LRRC23Q53EV4 343 aaPredicted RBP12.39□□□□□ -0.43
GCN1-201ENST00000300648 TSHZ3Q63HK5 1081 aa12.39□□□□□ -0.43
GCN1-201ENST00000300648 SERPINI1Q99574 410 aa12.39□□□□□ -0.43
GCN1-201ENST00000300648 RABEP2Q9H5N1 569 aa12.39□□□□□ -0.43
GCN1-201ENST00000300648 RAB20Q9NX57 234 aa12.39□□□□□ -0.43
GCN1-201ENST00000300648 LAD1O00515 517 aa12.39□□□□□ -0.43
GCN1-201ENST00000300648 LONRF2Q1L5Z9 754 aa12.39□□□□□ -0.43
GCN1-201ENST00000300648 TRIM68Q6AZZ1 485 aa12.39□□□□□ -0.43
GCN1-201ENST00000300648 TBC1D22AQ8WUA7 517 aa12.39□□□□□ -0.43
GCN1-201ENST00000300648 RTEL1Q9NZ71 1219 aa12.38□□□□□ -0.43
GCN1-201ENST00000300648 KIAA1468Q9P260 1216 aa12.38□□□□□ -0.43
GCN1-201ENST00000300648 STK38LQ9Y2H1 464 aa12.38□□□□□ -0.43
GCN1-201ENST00000300648 GPTP24298 496 aa12.38□□□□□ -0.43
GCN1-201ENST00000300648 SPC25Q9HBM1 224 aa12.38□□□□□ -0.43
GCN1-201ENST00000300648 SPECC1L-ADORA2AF8WAN1 911 aa12.38□□□□□ -0.43
GCN1-201ENST00000300648 POLR2BP30876 1174 aaKnown RBP12.38□□□□□ -0.43
GCN1-201ENST00000300648 PUM3Q15397 648 aaKnown RBP12.38□□□□□ -0.43
GCN1-201ENST00000300648 TMTC3Q6ZXV5 915 aa12.38□□□□□ -0.43
GCN1-201ENST00000300648 RNF34Q969K3 372 aa12.38□□□□□ -0.43
GCN1-201ENST00000300648 TRIM15Q9C019 465 aa12.38□□□□□ -0.43
GCN1-201ENST00000300648 SETD1BQ9UPS6 1966 aaKnown RBP12.38□□□□□ -0.43
GCN1-201ENST00000300648 KIF1CO43896 1103 aaKnown RBP12.38□□□□□ -0.43
GCN1-201ENST00000300648 RINT1Q6NUQ1 792 aa12.38□□□□□ -0.43
GCN1-201ENST00000300648 NBPF10Q6P3W6 841 aaKnown RBP12.38□□□□□ -0.43
GCN1-201ENST00000300648 SERPINB6P35237 376 aa12.38□□□□□ -0.43
GCN1-201ENST00000300648 ADCY7P51828 1080 aa12.38□□□□□ -0.43
GCN1-201ENST00000300648 BPIFB4P59827 614 aa12.38□□□□□ -0.43
GCN1-201ENST00000300648 XAGE3Q8WTP9 111 aa12.38□□□□□ -0.43
GCN1-201ENST00000300648 JDP2Q8WYK2 163 aa12.38□□□□□ -0.43
GCN1-201ENST00000300648 APPBP2Q92624 585 aa12.38□□□□□ -0.43
GCN1-201ENST00000300648 MID2Q9UJV3 735 aa12.38□□□□□ -0.43
GCN1-201ENST00000300648 PDZD8Q8NEN9 1154 aa12.38□□□□□ -0.43
GCN1-201ENST00000300648 CFAP61Q8NHU2 1237 aa12.38□□□□□ -0.43
GCN1-201ENST00000300648 PCDHB13Q9Y5F0 798 aa12.38□□□□□ -0.43
GCN1-201ENST00000300648 SBNO2Q9Y2G9 1366 aa12.37□□□□□ -0.43
GCN1-201ENST00000300648 NONOQ15233 471 aaKnown RBP eCLIP12.37□□□□□ -0.43
GCN1-201ENST00000300648 FNBP4Q8N3X1 1017 aaPredicted RBP12.37□□□□□ -0.43
GCN1-201ENST00000300648 ZC3H12CQ9C0D7 883 aaKnown RBP12.37□□□□□ -0.43
GCN1-201ENST00000300648 MRPL40Q9NQ50 206 aaKnown RBP12.37□□□□□ -0.43
GCN1-201ENST00000300648 AOC3Q16853 763 aa12.37□□□□□ -0.43
GCN1-201ENST00000300648 DPH6Q7L8W6 267 aa12.37□□□□□ -0.43
GCN1-201ENST00000300648 FAM96AQ9H5X1 160 aa12.37□□□□□ -0.43
GCN1-201ENST00000300648 MRPL44Q9H9J2 332 aaKnown RBP12.37□□□□□ -0.43
GCN1-201ENST00000300648 TPX2Q9ULW0 747 aaKnown RBP12.37□□□□□ -0.43
GCN1-201ENST00000300648 RAD51AP2Q09MP3 1159 aa12.37□□□□□ -0.43
GCN1-201ENST00000300648 LETM2Q2VYF4 491 aa12.37□□□□□ -0.43
GCN1-201ENST00000300648 SLFN12Q8IYM2 578 aa12.37□□□□□ -0.43
GCN1-201ENST00000300648 REXO1Q8N1G1 1221 aaKnown RBP12.37□□□□□ -0.43
GCN1-201ENST00000300648 MAPKBP1O60336 1514 aa12.37□□□□□ -0.43
GCN1-201ENST00000300648 SRGAP2BP0DMP2 458 aa12.37□□□□□ -0.43
GCN1-201ENST00000300648 GABPAQ06546 454 aa12.37□□□□□ -0.43
GCN1-201ENST00000300648 PPP2R5DQ14738 602 aa12.37□□□□□ -0.43
GCN1-201ENST00000300648 ERBB4Q15303 1308 aa12.37□□□□□ -0.43
GCN1-201ENST00000300648 KCNJ18B7U540 433 aa12.37□□□□□ -0.43
GCN1-201ENST00000300648 SLC27A2O14975 620 aa12.37□□□□□ -0.43
GCN1-201ENST00000300648 KCNJ12Q14500 433 aa12.37□□□□□ -0.43
GCN1-201ENST00000300648 PALM3A6NDB9 673 aaPredicted RBP12.37□□□□□ -0.43
GCN1-201ENST00000300648 C2CD5Q86YS7 1000 aa12.37□□□□□ -0.43
GCN1-201ENST00000300648 LRRC59Q96AG4 307 aaKnown RBP12.37□□□□□ -0.43
GCN1-201ENST00000300648 DSCC1Q9BVC3 393 aa12.37□□□□□ -0.43
GCN1-201ENST00000300648 LMBR1LQ6UX01 489 aa12.36□□□□□ -0.43
GCN1-201ENST00000300648 LRRC8AQ8IWT6 810 aa12.36□□□□□ -0.43
GCN1-201ENST00000300648 PDCD7Q8N8D1 485 aaKnown RBP12.36□□□□□ -0.43
GCN1-201ENST00000300648 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.36□□□□□ -0.43
GCN1-201ENST00000300648 CLTAP09496 248 aa12.36□□□□□ -0.43
GCN1-201ENST00000300648 ATF2P15336 505 aa12.36□□□□□ -0.43
GCN1-201ENST00000300648 SUPT20HQ8NEM7 779 aa12.36□□□□□ -0.43
GCN1-201ENST00000300648 GDAP1L1Q96MZ0 367 aa12.36□□□□□ -0.43
GCN1-201ENST00000300648 KIAA0232Q92628 1395 aa12.36□□□□□ -0.43
GCN1-201ENST00000300648 ATP5J2-PTCD1G3V325 749 aa12.36□□□□□ -0.43
GCN1-201ENST00000300648 SGSM2O43147 1006 aa12.36□□□□□ -0.43
GCN1-201ENST00000300648 ANKRD35Q8N283 1001 aa12.36□□□□□ -0.43
GCN1-201ENST00000300648 FAM212AQ96EL1 285 aa12.36□□□□□ -0.43
GCN1-201ENST00000300648 PACSIN2Q9UNF0 486 aaPredicted RBP12.36□□□□□ -0.43
GCN1-201ENST00000300648 POLD1P28340 1107 aa12.36□□□□□ -0.43
GCN1-201ENST00000300648 MTX1Q13505 466 aa12.36□□□□□ -0.43
GCN1-201ENST00000300648 ST13P4Q8IZP2 240 aaPredicted RBP12.36□□□□□ -0.43
GCN1-201ENST00000300648 RTCBQ9Y3I0 505 aaKnown RBP12.36□□□□□ -0.43
GCN1-201ENST00000300648 RGS12O14924 1447 aa12.36□□□□□ -0.43
GCN1-201ENST00000300648 STAM2O75886 525 aa12.36□□□□□ -0.43
GCN1-201ENST00000300648 EEF1GP26641 437 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms