RNA–Protein interactions for RNA: ENST00000299840.10

VWA3A-201, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,513 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-201ENST00000299840 TTC31Q49AM3 519 aaPredicted RBP12.5□□□□□ -0.41
VWA3A-201ENST00000299840 SBK1Q52WX2 424 aa12.5□□□□□ -0.41
VWA3A-201ENST00000299840 JAKMIP3Q5VZ66 844 aa12.5□□□□□ -0.41
VWA3A-201ENST00000299840 SDR16C5Q8N3Y7 309 aa12.5□□□□□ -0.41
VWA3A-201ENST00000299840 ZNF446Q9NWS9 450 aa12.5□□□□□ -0.41
VWA3A-201ENST00000299840 MCM9Q9NXL9 1143 aa12.5□□□□□ -0.41
VWA3A-201ENST00000299840 SERPINB13Q9UIV8 391 aa12.5□□□□□ -0.41
VWA3A-201ENST00000299840 KCNH4Q9UQ05 1017 aa12.5□□□□□ -0.41
VWA3A-201ENST00000299840 POLR3DP05423 398 aaPredicted RBP12.5□□□□□ -0.41
VWA3A-201ENST00000299840 SLURP2P0DP57 97 aa12.5□□□□□ -0.41
VWA3A-201ENST00000299840 SYT10Q6XYQ8 523 aa12.5□□□□□ -0.41
VWA3A-201ENST00000299840 MS4A4AQ96JQ5 239 aa12.5□□□□□ -0.41
VWA3A-201ENST00000299840 HIP1O00291 1037 aa12.49□□□□□ -0.41
VWA3A-201ENST00000299840 SDSP20132 328 aa12.49□□□□□ -0.41
VWA3A-201ENST00000299840 PLCD1P51178 756 aa12.49□□□□□ -0.41
VWA3A-201ENST00000299840 GTF2A2P52657 109 aa12.49□□□□□ -0.41
VWA3A-201ENST00000299840 RRP1BQ14684 758 aaKnown RBP12.49□□□□□ -0.41
VWA3A-201ENST00000299840 C12orf60Q5U649 245 aa12.49□□□□□ -0.41
VWA3A-201ENST00000299840 CRACR2BQ8N4Y2 399 aaPredicted RBP12.49□□□□□ -0.41
VWA3A-201ENST00000299840 RILPL2Q969X0 211 aa12.49□□□□□ -0.41
VWA3A-201ENST00000299840 CFHR5Q9BXR6 569 aa12.49□□□□□ -0.41
VWA3A-201ENST00000299840 FAM196BA6NMK8 535 aa12.49□□□□□ -0.41
VWA3A-201ENST00000299840 CXCL11O14625 94 aa12.49□□□□□ -0.41
VWA3A-201ENST00000299840 CTIFO43310 598 aaKnown RBP12.49□□□□□ -0.41
VWA3A-201ENST00000299840 PTPRAP18433 802 aa12.49□□□□□ -0.41
VWA3A-201ENST00000299840 E2F4Q16254 413 aa12.49□□□□□ -0.41
VWA3A-201ENST00000299840 SEC62Q99442 399 aaKnown RBP12.49□□□□□ -0.41
VWA3A-201ENST00000299840 PICK1Q9NRD5 415 aa12.49□□□□□ -0.41
VWA3A-201ENST00000299840 ARPP21Q9UBL0 812 aaPredicted RBP12.49□□□□□ -0.41
VWA3A-201ENST00000299840 SWAP70Q9UH65 585 aa12.49□□□□□ -0.41
VWA3A-201ENST00000299840 GREB1LQ9C091 1923 aaPredicted RBP12.48□□□□□ -0.41
VWA3A-201ENST00000299840 LOC285556D6RIA3 1793 aa12.48□□□□□ -0.41
VWA3A-201ENST00000299840 GSPT1P15170 499 aaKnown RBP12.48□□□□□ -0.41
VWA3A-201ENST00000299840 ABCD1P33897 745 aa12.48□□□□□ -0.41
VWA3A-201ENST00000299840 MCMDC2Q4G0Z9 681 aa12.48□□□□□ -0.41
VWA3A-201ENST00000299840 SUGP1Q8IWZ8 645 aaKnown RBP12.48□□□□□ -0.41
VWA3A-201ENST00000299840 AMOTL1Q8IY63 956 aa12.48□□□□□ -0.41
VWA3A-201ENST00000299840 OTUD5Q96G74 571 aa12.48□□□□□ -0.41
VWA3A-201ENST00000299840 BEGAINQ9BUH8 593 aa12.48□□□□□ -0.41
VWA3A-201ENST00000299840 DIAPH3Q9NSV4 1193 aa12.48□□□□□ -0.41
VWA3A-201ENST00000299840 ZCCHC17Q9NP64 241 aaKnown RBP12.48□□□□□ -0.41
VWA3A-201ENST00000299840 RNF186Q9NXI6 227 aa12.48□□□□□ -0.41
VWA3A-201ENST00000299840 AFG3L2Q9Y4W6 797 aa12.48□□□□□ -0.41
VWA3A-201ENST00000299840 ROBO3Q96MS0 1386 aa12.47□□□□□ -0.41
VWA3A-201ENST00000299840 USP17L12C9JPN9 530 aa12.47□□□□□ -0.41
VWA3A-201ENST00000299840 USP17L21D6R901 530 aa12.47□□□□□ -0.41
VWA3A-201ENST00000299840 FOXN1O15353 648 aa12.47□□□□□ -0.41
VWA3A-201ENST00000299840 ALDH1A1P00352 501 aa12.47□□□□□ -0.41
VWA3A-201ENST00000299840 CETPP11597 493 aa12.47□□□□□ -0.41
VWA3A-201ENST00000299840 NEFHP12036 1026 aa12.47□□□□□ -0.41
VWA3A-201ENST00000299840 SHMT1P34896 483 aa12.47□□□□□ -0.41
VWA3A-201ENST00000299840 CTCFP49711 727 aaPredicted RBP12.47□□□□□ -0.41
VWA3A-201ENST00000299840 MKRN3Q13064 507 aaKnown RBP12.47□□□□□ -0.41
VWA3A-201ENST00000299840 NMIQ13287 307 aaPredicted RBP12.47□□□□□ -0.41
VWA3A-201ENST00000299840 SNAPC2Q13487 334 aa12.47□□□□□ -0.41
VWA3A-201ENST00000299840 ALX1Q15699 326 aa12.47□□□□□ -0.41
VWA3A-201ENST00000299840 NOM1Q5C9Z4 860 aaKnown RBP12.47□□□□□ -0.41
VWA3A-201ENST00000299840 MCTP2Q6DN12 878 aa12.47□□□□□ -0.41
VWA3A-201ENST00000299840 ACRBPQ8NEB7 543 aa12.47□□□□□ -0.41
VWA3A-201ENST00000299840 KIF18AQ8NI77 898 aa12.47□□□□□ -0.41
VWA3A-201ENST00000299840 EPB41L4AQ9HCS5 686 aaPredicted RBP12.47□□□□□ -0.41
VWA3A-201ENST00000299840 NUB1Q9Y5A7 615 aa12.47□□□□□ -0.41
VWA3A-201ENST00000299840 A0A0D9SFI3 127 aa12.47□□□□□ -0.41
VWA3A-201ENST00000299840 ASNSP08243 561 aa12.47□□□□□ -0.41
VWA3A-201ENST00000299840 CYP2D6P10635 497 aa12.47□□□□□ -0.41
VWA3A-201ENST00000299840 TTC19Q6DKK2 380 aaPredicted RBP12.47□□□□□ -0.41
VWA3A-201ENST00000299840 IFNL1Q8IU54 200 aa12.47□□□□□ -0.41
VWA3A-201ENST00000299840 IFNL3Q8IZI9 196 aa12.47□□□□□ -0.41
VWA3A-201ENST00000299840 WDR18Q9BV38 432 aa12.47□□□□□ -0.41
VWA3A-201ENST00000299840 ETAA1Q9NY74 926 aa12.47□□□□□ -0.41
VWA3A-201ENST00000299840 LAMA4Q16363 1823 aa12.47□□□□□ -0.41
VWA3A-201ENST00000299840 HSPA8P11142 646 aaKnown RBP12.46□□□□□ -0.41
VWA3A-201ENST00000299840 IRX1P78414 480 aaPredicted RBP12.46□□□□□ -0.41
VWA3A-201ENST00000299840 SYCP1Q15431 976 aa12.46□□□□□ -0.41
VWA3A-201ENST00000299840 C16orf86Q6ZW13 317 aa12.46□□□□□ -0.41
VWA3A-201ENST00000299840 BRI3BPQ8WY22 251 aa12.46□□□□□ -0.41
VWA3A-201ENST00000299840 FAM227BQ96M60 508 aa12.46□□□□□ -0.41
VWA3A-201ENST00000299840 NACAP1Q9BZK3 213 aa12.46□□□□□ -0.41
VWA3A-201ENST00000299840 ZMYM6O95789 1325 aa12.46□□□□□ -0.42
VWA3A-201ENST00000299840 USP17L5A8MUK1 530 aa12.46□□□□□ -0.42
VWA3A-201ENST00000299840 FOXP2O15409 715 aa12.46□□□□□ -0.42
VWA3A-201ENST00000299840 OTUD7BQ6GQQ9 843 aa12.46□□□□□ -0.42
VWA3A-201ENST00000299840 ZBTB21Q9ULJ3 1066 aa12.46□□□□□ -0.42
VWA3A-201ENST00000299840 ZHX2Q9Y6X8 837 aa12.46□□□□□ -0.42
VWA3A-201ENST00000299840 CCL15-CCL14A0A0B4J2E2 113 aa12.45□□□□□ -0.42
VWA3A-201ENST00000299840 A0A0G2JLL6 359 aaPredicted RBP12.45□□□□□ -0.42
VWA3A-201ENST00000299840 CD151P48509 253 aa12.45□□□□□ -0.42
VWA3A-201ENST00000299840 JAG1P78504 1218 aa12.45□□□□□ -0.42
VWA3A-201ENST00000299840 MOGSQ13724 837 aa12.45□□□□□ -0.42
VWA3A-201ENST00000299840 CCL15Q16663 113 aa12.45□□□□□ -0.42
VWA3A-201ENST00000299840 CERKLQ49MI3 558 aaPredicted RBP12.45□□□□□ -0.42
VWA3A-201ENST00000299840 PRRT2Q7Z6L0 340 aaPredicted RBP12.45□□□□□ -0.42
VWA3A-201ENST00000299840 CEP89Q96ST8 783 aa12.45□□□□□ -0.42
VWA3A-201ENST00000299840 PTPN18Q99952 460 aa12.45□□□□□ -0.42
VWA3A-201ENST00000299840 MAF1Q9H063 256 aa12.45□□□□□ -0.42
VWA3A-201ENST00000299840 AS3MTQ9HBK9 375 aa12.45□□□□□ -0.42
VWA3A-201ENST00000299840 CCDC171Q6TFL3 1326 aa12.45□□□□□ -0.42
VWA3A-201ENST00000299840 IGF2BP3O00425 579 aaKnown RBP eCLIP12.45□□□□□ -0.42
VWA3A-201ENST00000299840 EVX2Q03828 476 aa12.45□□□□□ -0.42
VWA3A-201ENST00000299840 SLC4A8Q2Y0W8 1093 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms