RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 SAMSN1Q9NSI8 373 aaKnown RBP17.65■□□□□ 0.42
UBAP1-201ENST00000297661 CCDC152Q4G0S7 254 aa17.64■□□□□ 0.42
UBAP1-201ENST00000297661 KLHL10Q6JEL2 608 aa17.64■□□□□ 0.42
UBAP1-201ENST00000297661 WASF1Q92558 559 aa17.64■□□□□ 0.42
UBAP1-201ENST00000297661 EPSTI1Q96J88 318 aa17.64■□□□□ 0.42
UBAP1-201ENST00000297661 MED15Q96RN5 788 aa17.64■□□□□ 0.42
UBAP1-201ENST00000297661 ANKZF1Q9H8Y5 726 aa17.64■□□□□ 0.42
UBAP1-201ENST00000297661 MKRN1Q9UHC7 482 aaKnown RBP17.64■□□□□ 0.42
UBAP1-201ENST00000297661 EIF3JO75822 258 aaKnown RBP17.64■□□□□ 0.41
UBAP1-201ENST00000297661 PLEKHA8P1O95397 391 aa17.64■□□□□ 0.41
UBAP1-201ENST00000297661 DEXIO95424 95 aa17.64■□□□□ 0.41
UBAP1-201ENST00000297661 STAMQ92783 540 aa17.64■□□□□ 0.41
UBAP1-201ENST00000297661 SUGCTQ9HAC7 445 aa17.64■□□□□ 0.41
UBAP1-201ENST00000297661 ANKRD36CQ5JPF3 1778 aa17.64■□□□□ 0.41
UBAP1-201ENST00000297661 A0A087X0B3 334 aa17.63■□□□□ 0.41
UBAP1-201ENST00000297661 STX17P56962 302 aa17.63■□□□□ 0.41
UBAP1-201ENST00000297661 KARSQ15046 597 aaKnown RBP17.63■□□□□ 0.41
UBAP1-201ENST00000297661 CCDC24Q8N4L8 307 aa17.63■□□□□ 0.41
UBAP1-201ENST00000297661 DEF6Q9H4E7 631 aa17.63■□□□□ 0.41
UBAP1-201ENST00000297661 CHD4Q14839 1912 aa17.63■□□□□ 0.41
UBAP1-201ENST00000297661 CAMTA2O94983 1202 aa17.63■□□□□ 0.41
UBAP1-201ENST00000297661 WWC2Q6AWC2 1192 aa17.63■□□□□ 0.41
UBAP1-201ENST00000297661 SRGAP1Q7Z6B7 1085 aa17.63■□□□□ 0.41
UBAP1-201ENST00000297661 SMYD4Q8IYR2 804 aaPredicted RBP17.63■□□□□ 0.41
UBAP1-201ENST00000297661 PUF60Q9UHX1 559 aaKnown RBP17.63■□□□□ 0.41
UBAP1-201ENST00000297661 JAG2Q9Y219 1238 aa17.63■□□□□ 0.41
UBAP1-201ENST00000297661 ATF5Q9Y2D1 282 aaPredicted RBP17.63■□□□□ 0.41
UBAP1-201ENST00000297661 V9GY48 417 aaPredicted RBP17.63■□□□□ 0.41
UBAP1-201ENST00000297661 RREB1Q92766 1687 aa17.63■□□□□ 0.41
UBAP1-201ENST00000297661 MAGEB6P1A0A0J9YX57 407 aa17.63■□□□□ 0.41
UBAP1-201ENST00000297661 RILPL1Q5EBL4 403 aa17.63■□□□□ 0.41
UBAP1-201ENST00000297661 LRRC31Q6UY01 552 aa17.63■□□□□ 0.41
UBAP1-201ENST00000297661 PNKPQ96T60 521 aa17.63■□□□□ 0.41
UBAP1-201ENST00000297661 DESI2Q9BSY9 194 aa17.63■□□□□ 0.41
UBAP1-201ENST00000297661 FOXP1Q9H334 677 aaPredicted RBP17.63■□□□□ 0.41
UBAP1-201ENST00000297661 L1RE1Q9UN81 338 aa17.63■□□□□ 0.41
UBAP1-201ENST00000297661 NMT2O60551 498 aa17.62■□□□□ 0.41
UBAP1-201ENST00000297661 ENAHQ8N8S7 591 aaPredicted RBP17.62■□□□□ 0.41
UBAP1-201ENST00000297661 IRX2Q9BZI1 471 aaPredicted RBP17.62■□□□□ 0.41
UBAP1-201ENST00000297661 ABCB6Q9NP58 842 aa17.62■□□□□ 0.41
UBAP1-201ENST00000297661 STX10O60499 249 aa17.62■□□□□ 0.41
UBAP1-201ENST00000297661 PHACTR2O75167 634 aa17.62■□□□□ 0.41
UBAP1-201ENST00000297661 NTSR2O95665 410 aa17.62■□□□□ 0.41
UBAP1-201ENST00000297661 GNAT2P19087 354 aa17.62■□□□□ 0.41
UBAP1-201ENST00000297661 USP5P45974 858 aa17.62■□□□□ 0.41
UBAP1-201ENST00000297661 RC3H1Q5TC82 1133 aaKnown RBP17.62■□□□□ 0.41
UBAP1-201ENST00000297661 ACTN4O43707 911 aaKnown RBP17.61■□□□□ 0.41
UBAP1-201ENST00000297661 ERLIN1O75477 346 aa17.61■□□□□ 0.41
UBAP1-201ENST00000297661 GPATCH11Q8N954 259 aa17.61■□□□□ 0.41
UBAP1-201ENST00000297661 CCDC102AQ96A19 550 aa17.61■□□□□ 0.41
UBAP1-201ENST00000297661 RAB21Q9UL25 225 aa17.61■□□□□ 0.41
UBAP1-201ENST00000297661 UBR3Q6ZT12 1888 aa17.61■□□□□ 0.41
UBAP1-201ENST00000297661 ZPR1O75312 459 aa17.61■□□□□ 0.41
UBAP1-201ENST00000297661 KLRK1P26718 216 aa17.61■□□□□ 0.41
UBAP1-201ENST00000297661 MMP14P50281 582 aa17.61■□□□□ 0.41
UBAP1-201ENST00000297661 AKAP17AQ02040 695 aaKnown RBP17.61■□□□□ 0.41
UBAP1-201ENST00000297661 ZNF174Q15697 407 aa17.61■□□□□ 0.41
UBAP1-201ENST00000297661 MSL3Q8N5Y2 521 aaKnown RBP17.61■□□□□ 0.41
UBAP1-201ENST00000297661 PLEKHA4Q9H4M7 779 aa17.61■□□□□ 0.41
UBAP1-201ENST00000297661 SEC23AQ15436 765 aa17.6■□□□□ 0.41
UBAP1-201ENST00000297661 E2F4Q16254 413 aa17.6■□□□□ 0.41
UBAP1-201ENST00000297661 PKN1Q16512 942 aa17.6■□□□□ 0.41
UBAP1-201ENST00000297661 HSP90B2PQ58FF3 399 aa17.6■□□□□ 0.41
UBAP1-201ENST00000297661 SRPRBQ9Y5M8 271 aaKnown RBP17.6■□□□□ 0.41
UBAP1-201ENST00000297661 CCDC196A0A1B0GTZ2 297 aa17.6■□□□□ 0.41
UBAP1-201ENST00000297661 POTEB2H3BUK9 544 aa17.6■□□□□ 0.41
UBAP1-201ENST00000297661 TBX2Q13207 712 aaPredicted RBP17.6■□□□□ 0.41
UBAP1-201ENST00000297661 TC2NQ8N9U0 490 aa17.6■□□□□ 0.41
UBAP1-201ENST00000297661 CPLX3Q8WVH0 158 aa17.6■□□□□ 0.41
UBAP1-201ENST00000297661 ESR2Q92731 530 aa17.6■□□□□ 0.41
UBAP1-201ENST00000297661 RNF41Q9H4P4 317 aaPredicted RBP17.6■□□□□ 0.41
UBAP1-201ENST00000297661 MORC3Q14149 939 aa17.59■□□□□ 0.41
UBAP1-201ENST00000297661 MTF1Q14872 753 aa17.59■□□□□ 0.41
UBAP1-201ENST00000297661 ERFEQ4G0M1 354 aa17.59■□□□□ 0.41
UBAP1-201ENST00000297661 MSANTD4Q8NCY6 345 aa17.59■□□□□ 0.41
UBAP1-201ENST00000297661 ZNF384Q8TF68 577 aa17.59■□□□□ 0.41
UBAP1-201ENST00000297661 MRPL44Q9H9J2 332 aaKnown RBP17.59■□□□□ 0.41
UBAP1-201ENST00000297661 HOOK1Q9UJC3 728 aaKnown RBP17.59■□□□□ 0.41
UBAP1-201ENST00000297661 LRP5O75197 1615 aa17.59■□□□□ 0.41
UBAP1-201ENST00000297661 TAF1P21675 1872 aa17.59■□□□□ 0.41
UBAP1-201ENST00000297661 COL1A1P02452 1464 aaPredicted RBP17.59■□□□□ 0.41
UBAP1-201ENST00000297661 ADAMTS3O15072 1205 aa17.59■□□□□ 0.41
UBAP1-201ENST00000297661 TEX33O43247 280 aa17.59■□□□□ 0.41
UBAP1-201ENST00000297661 VEGFAP15692 232 aaPredicted RBP17.59■□□□□ 0.41
UBAP1-201ENST00000297661 CASP8Q14790 479 aa17.59■□□□□ 0.41
UBAP1-201ENST00000297661 FAM47AQ5JRC9 791 aa17.59■□□□□ 0.41
UBAP1-201ENST00000297661 IFIT1BQ5T764 474 aaKnown RBP17.59■□□□□ 0.41
UBAP1-201ENST00000297661 FAM71BQ8TC56 605 aa17.59■□□□□ 0.41
UBAP1-201ENST00000297661 ZSCAN10Q96SZ4 725 aaPredicted RBP17.59■□□□□ 0.41
UBAP1-201ENST00000297661 CD44P16070 742 aaKnown RBP17.58■□□□□ 0.41
UBAP1-201ENST00000297661 SARSP49591 514 aaKnown RBP17.58■□□□□ 0.41
UBAP1-201ENST00000297661 SYMPKQ92797 1274 aaKnown RBP17.58■□□□□ 0.41
UBAP1-201ENST00000297661 RGPD3A6NKT7 1758 aaPredicted RBP17.58■□□□□ 0.4
UBAP1-201ENST00000297661 RGPD4Q7Z3J3 1758 aa17.58■□□□□ 0.4
UBAP1-201ENST00000297661 TRIM75PA6NK02 468 aa17.58■□□□□ 0.4
UBAP1-201ENST00000297661 ZNF18P17022 549 aa17.58■□□□□ 0.4
UBAP1-201ENST00000297661 CEP112Q8N8E3 955 aa17.58■□□□□ 0.4
UBAP1-201ENST00000297661 RIOK1Q9BRS2 568 aaKnown RBP17.58■□□□□ 0.4
UBAP1-201ENST00000297661 CDC23Q9UJX2 597 aa17.58■□□□□ 0.4
UBAP1-201ENST00000297661 MYH2Q9UKX2 1941 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms