RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 AIFM3Q96NN9 605 aa17.09■□□□□ 0.33
FNDC1-201ENST00000297267 ZSCAN10Q96SZ4 725 aaPredicted RBP17.09■□□□□ 0.33
FNDC1-201ENST00000297267 MED10Q9BTT4 135 aa17.09■□□□□ 0.33
FNDC1-201ENST00000297267 CIB2O75838 187 aa17.09■□□□□ 0.33
FNDC1-201ENST00000297267 SMTNP53814 917 aa17.09■□□□□ 0.33
FNDC1-201ENST00000297267 PCIF1Q9H4Z3 704 aa17.09■□□□□ 0.33
FNDC1-201ENST00000297267 BZW2Q9Y6E2 419 aaKnown RBP17.09■□□□□ 0.33
FNDC1-201ENST00000297267 ZMYM3Q14202 1370 aa17.09■□□□□ 0.33
FNDC1-201ENST00000297267 IFNB1P01574 187 aa17.09■□□□□ 0.33
FNDC1-201ENST00000297267 ATP2A2P16615 1042 aaKnown RBP17.09■□□□□ 0.33
FNDC1-201ENST00000297267 SLC7A5Q01650 507 aa17.09■□□□□ 0.33
FNDC1-201ENST00000297267 IFT20Q8IY31 132 aa17.09■□□□□ 0.33
FNDC1-201ENST00000297267 IFT74Q96LB3 600 aa17.09■□□□□ 0.33
FNDC1-201ENST00000297267 MMS19Q96T76 1030 aa17.09■□□□□ 0.33
FNDC1-201ENST00000297267 PRPF6O94906 941 aaKnown RBP17.09■□□□□ 0.33
FNDC1-201ENST00000297267 MRPL12P52815 198 aaKnown RBP17.09■□□□□ 0.33
FNDC1-201ENST00000297267 GNGT1P63211 74 aa17.09■□□□□ 0.33
FNDC1-201ENST00000297267 LRRC8AQ8IWT6 810 aa17.09■□□□□ 0.33
FNDC1-201ENST00000297267 CCT6BQ92526 530 aa17.09■□□□□ 0.33
FNDC1-201ENST00000297267 ARHGEF10LQ9HCE6 1279 aa17.09■□□□□ 0.33
FNDC1-201ENST00000297267 SEC31BQ9NQW1 1179 aa17.09■□□□□ 0.33
FNDC1-201ENST00000297267 PIK3C2GO75747 1445 aa17.08■□□□□ 0.33
FNDC1-201ENST00000297267 CHL1O00533 1208 aa17.08■□□□□ 0.33
FNDC1-201ENST00000297267 PHKA1P46020 1223 aa17.08■□□□□ 0.33
FNDC1-201ENST00000297267 SLC9C1Q4G0N8 1177 aa17.08■□□□□ 0.33
FNDC1-201ENST00000297267 LPIN2Q92539 896 aa17.08■□□□□ 0.33
FNDC1-201ENST00000297267 FGAP02671 866 aa17.08■□□□□ 0.33
FNDC1-201ENST00000297267 SLC4A1P02730 911 aa17.08■□□□□ 0.33
FNDC1-201ENST00000297267 TTC6Q86TZ1 520 aa17.08■□□□□ 0.33
FNDC1-201ENST00000297267 UBL4BQ8N7F7 174 aa17.08■□□□□ 0.33
FNDC1-201ENST00000297267 CCDC127Q96BQ5 260 aa17.08■□□□□ 0.33
FNDC1-201ENST00000297267 BAIAP2L1Q9UHR4 511 aa17.08■□□□□ 0.33
FNDC1-201ENST00000297267 CLIC2O15247 247 aa17.08■□□□□ 0.32
FNDC1-201ENST00000297267 ALAS1P13196 640 aa17.08■□□□□ 0.32
FNDC1-201ENST00000297267 ARID5BQ14865 1188 aa17.08■□□□□ 0.32
FNDC1-201ENST00000297267 PPP2R2CQ9Y2T4 447 aa17.08■□□□□ 0.32
FNDC1-201ENST00000297267 CETN3O15182 167 aa17.08■□□□□ 0.32
FNDC1-201ENST00000297267 ITKQ08881 620 aa17.08■□□□□ 0.32
FNDC1-201ENST00000297267 POLA2Q14181 598 aa17.08■□□□□ 0.32
FNDC1-201ENST00000297267 TTBK2Q6IQ55 1244 aa17.08■□□□□ 0.32
FNDC1-201ENST00000297267 USP44Q9H0E7 712 aa17.08■□□□□ 0.32
FNDC1-201ENST00000297267 ZWINTO95229 277 aa17.08■□□□□ 0.32
FNDC1-201ENST00000297267 SNX16P57768 344 aa17.08■□□□□ 0.32
FNDC1-201ENST00000297267 HHATQ5VTY9 493 aa17.08■□□□□ 0.32
FNDC1-201ENST00000297267 C4orf50Q6ZRC1 276 aa17.08■□□□□ 0.32
FNDC1-201ENST00000297267 NOP9Q86U38 636 aaKnown RBP17.08■□□□□ 0.32
FNDC1-201ENST00000297267 SH3TC1Q8TE82 1336 aa17.08■□□□□ 0.32
FNDC1-201ENST00000297267 PLCG2P16885 1265 aa17.07■□□□□ 0.32
FNDC1-201ENST00000297267 SSTR3P32745 418 aaPredicted RBP17.07■□□□□ 0.32
FNDC1-201ENST00000297267 IRX3P78415 501 aaPredicted RBP17.07■□□□□ 0.32
FNDC1-201ENST00000297267 DIXDC1Q155Q3 683 aa17.07■□□□□ 0.32
FNDC1-201ENST00000297267 RPUSD2Q8IZ73 545 aaKnown RBP17.07■□□□□ 0.32
FNDC1-201ENST00000297267 ZNF653Q96CK0 615 aa17.07■□□□□ 0.32
FNDC1-201ENST00000297267 THOC1Q96FV9 657 aaKnown RBP17.07■□□□□ 0.32
FNDC1-201ENST00000297267 CCDC87Q9NVE4 849 aa17.07■□□□□ 0.32
FNDC1-201ENST00000297267 KDM6BO15054 1643 aa17.07■□□□□ 0.32
FNDC1-201ENST00000297267 ADCY9O60503 1353 aa17.07■□□□□ 0.32
FNDC1-201ENST00000297267 LACTBP83111 547 aaPredicted RBP17.07■□□□□ 0.32
FNDC1-201ENST00000297267 ARHGEF16Q5VV41 709 aa17.07■□□□□ 0.32
FNDC1-201ENST00000297267 DNAJC17Q9NVM6 304 aaKnown RBP17.07■□□□□ 0.32
FNDC1-201ENST00000297267 KIF21AQ7Z4S6 1674 aa17.07■□□□□ 0.32
FNDC1-201ENST00000297267 CASP1P29466 404 aa17.07■□□□□ 0.32
FNDC1-201ENST00000297267 TRIP13Q15645 432 aaPredicted RBP17.07■□□□□ 0.32
FNDC1-201ENST00000297267 SPOUT1Q5T280 376 aaKnown RBP17.07■□□□□ 0.32
FNDC1-201ENST00000297267 EP400NLQ6ZTU2 488 aa17.07■□□□□ 0.32
FNDC1-201ENST00000297267 RPSAP08865 295 aaKnown RBP17.07■□□□□ 0.32
FNDC1-201ENST00000297267 RBL2Q08999 1139 aa17.07■□□□□ 0.32
FNDC1-201ENST00000297267 RPS6KA1Q15418 735 aa17.07■□□□□ 0.32
FNDC1-201ENST00000297267 EIF4G3O43432 1585 aaKnown RBP17.07■□□□□ 0.32
FNDC1-201ENST00000297267 MAST1Q9Y2H9 1570 aa17.07■□□□□ 0.32
FNDC1-201ENST00000297267 ANKRD65E5RJM6 399 aa17.07■□□□□ 0.32
FNDC1-201ENST00000297267 K7ENM7 598 aa17.07■□□□□ 0.32
FNDC1-201ENST00000297267 CTAGE3PQ8IX95 158 aa17.07■□□□□ 0.32
FNDC1-201ENST00000297267 CCDC89Q8N998 374 aa17.07■□□□□ 0.32
FNDC1-201ENST00000297267 METTL14Q9HCE5 456 aaKnown RBP17.07■□□□□ 0.32
FNDC1-201ENST00000297267 PDE11AQ9HCR9 933 aa17.07■□□□□ 0.32
FNDC1-201ENST00000297267 NOD1Q9Y239 953 aa17.07■□□□□ 0.32
FNDC1-201ENST00000297267 LIG3P49916 1009 aa17.06■□□□□ 0.32
FNDC1-201ENST00000297267 ZNF445P59923 1031 aa17.06■□□□□ 0.32
FNDC1-201ENST00000297267 GADL1Q6ZQY3 521 aa17.06■□□□□ 0.32
FNDC1-201ENST00000297267 MTMR6Q9Y217 621 aa17.06■□□□□ 0.32
FNDC1-201ENST00000297267 SOWAHDA6NJG2 315 aa17.06■□□□□ 0.32
FNDC1-201ENST00000297267 BAG2O95816 211 aa17.06■□□□□ 0.32
FNDC1-201ENST00000297267 ZNF215Q9UL58 517 aaPredicted RBP17.06■□□□□ 0.32
FNDC1-201ENST00000297267 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.06■□□□□ 0.32
FNDC1-201ENST00000297267 FIS1Q9Y3D6 152 aa17.06■□□□□ 0.32
FNDC1-201ENST00000297267 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.06■□□□□ 0.32
FNDC1-201ENST00000297267 F5H423 210 aaPredicted RBP17.06■□□□□ 0.32
FNDC1-201ENST00000297267 NEDD9Q14511 834 aa17.06■□□□□ 0.32
FNDC1-201ENST00000297267 NBPF14Q5TI25 921 aa17.06■□□□□ 0.32
FNDC1-201ENST00000297267 DDX25Q9UHL0 483 aaKnown RBP17.06■□□□□ 0.32
FNDC1-201ENST00000297267 MFSD14BQ5SR56 506 aa17.06■□□□□ 0.32
FNDC1-201ENST00000297267 CCDC13Q8IYE1 715 aa17.06■□□□□ 0.32
FNDC1-201ENST00000297267 TTC14Q96N46 770 aa17.06■□□□□ 0.32
FNDC1-201ENST00000297267 NACA2Q9H009 215 aa17.06■□□□□ 0.32
FNDC1-201ENST00000297267 CAPN7Q9Y6W3 813 aa17.06■□□□□ 0.32
FNDC1-201ENST00000297267 ZFYVE9O95405 1425 aa17.06■□□□□ 0.32
FNDC1-201ENST00000297267 CTNNA1P35221 906 aaKnown RBP17.06■□□□□ 0.32
FNDC1-201ENST00000297267 PPP1R13BQ96KQ4 1090 aa17.06■□□□□ 0.32
FNDC1-201ENST00000297267 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms