RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 C19orf81C9J6K1 198 aa9.77□□□□□ -0.85
PTPDC1-201ENST00000288976 NTRK3Q16288 839 aa9.77□□□□□ -0.85
PTPDC1-201ENST00000288976 MIGA2Q7L4E1 593 aa9.77□□□□□ -0.85
PTPDC1-201ENST00000288976 SIAH1Q8IUQ4 282 aa9.77□□□□□ -0.85
PTPDC1-201ENST00000288976 CCDC83Q8IWF9 413 aa9.77□□□□□ -0.85
PTPDC1-201ENST00000288976 ANKRD13AQ8IZ07 590 aa9.77□□□□□ -0.85
PTPDC1-201ENST00000288976 FAM217BQ9NTX9 383 aaPredicted RBP9.77□□□□□ -0.85
PTPDC1-201ENST00000288976 PDHBP11177 359 aa9.76□□□□□ -0.85
PTPDC1-201ENST00000288976 JAG1P78504 1218 aa9.76□□□□□ -0.85
PTPDC1-201ENST00000288976 TPD52L1Q16890 204 aaPredicted RBP9.76□□□□□ -0.85
PTPDC1-201ENST00000288976 SH3D19Q5HYK7 790 aa9.76□□□□□ -0.85
PTPDC1-201ENST00000288976 RBM46Q8TBY0 533 aaKnown RBP9.76□□□□□ -0.85
PTPDC1-201ENST00000288976 CLIP2Q9UDT6 1046 aa9.76□□□□□ -0.85
PTPDC1-201ENST00000288976 STX8Q9UNK0 236 aa9.76□□□□□ -0.85
PTPDC1-201ENST00000288976 PASKQ96RG2 1323 aa9.76□□□□□ -0.85
PTPDC1-201ENST00000288976 PRPF3O43395 683 aaKnown RBP9.76□□□□□ -0.85
PTPDC1-201ENST00000288976 PDCP20941 246 aa9.76□□□□□ -0.85
PTPDC1-201ENST00000288976 LDLRAD1Q5T700 205 aa9.76□□□□□ -0.85
PTPDC1-201ENST00000288976 NBPF11Q86T75 865 aa9.76□□□□□ -0.85
PTPDC1-201ENST00000288976 SMC3Q9UQE7 1217 aa9.76□□□□□ -0.85
PTPDC1-201ENST00000288976 CTDNEP1O95476 244 aa9.76□□□□□ -0.85
PTPDC1-201ENST00000288976 PTPRAP18433 802 aa9.76□□□□□ -0.85
PTPDC1-201ENST00000288976 PPATQ06203 517 aa9.76□□□□□ -0.85
PTPDC1-201ENST00000288976 USP17L2Q6R6M4 530 aa9.76□□□□□ -0.85
PTPDC1-201ENST00000288976 BTNL9Q6UXG8 535 aa9.76□□□□□ -0.85
PTPDC1-201ENST00000288976 MICU3Q86XE3 530 aa9.76□□□□□ -0.85
PTPDC1-201ENST00000288976 GLIS2Q9BZE0 524 aaPredicted RBP9.76□□□□□ -0.85
PTPDC1-201ENST00000288976 SNCAIPQ9Y6H5 919 aa9.76□□□□□ -0.85
PTPDC1-201ENST00000288976 CDC27P30260 824 aa9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 FUT2Q10981 343 aa9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 PPIL2Q13356 520 aa9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 RAB3GAP1Q15042 981 aa9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 PIBF1Q8WXW3 757 aa9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 VCPKMTQ9H867 229 aa9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 NMRK2Q9NPI5 230 aa9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 SH3GLB2Q9NR46 395 aa9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 CSADQ9Y600 493 aa9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 CNTNAP5Q8WYK1 1306 aa9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 PTPDC1A2A3K4 754 aa9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 ZNF543Q08ER8 600 aa9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 TRIM29Q14134 588 aa9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 SMC1BQ8NDV3 1235 aa9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 AFG3L2Q9Y4W6 797 aa9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 WDR46O15213 610 aaKnown RBP9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 DEXIO95424 95 aa9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 SSRP1Q08945 709 aaKnown RBP9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 TRIM22Q8IYM9 498 aa9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 ZNF280CQ8ND82 737 aa9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 MAF1Q9H063 256 aa9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 RTN4Q9NQC3 1192 aaKnown RBP9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 PNMA2Q9UL42 364 aa9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 SPDYE5A6NIY4 337 aa9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 FSTL1Q12841 308 aa9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 PPP1R18Q6NYC8 613 aa9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 KCNH4Q9UQ05 1017 aa9.75□□□□□ -0.85
PTPDC1-201ENST00000288976 GJB2P29033 226 aa9.74□□□□□ -0.85
PTPDC1-201ENST00000288976 VGLL4Q14135 290 aa9.74□□□□□ -0.85
PTPDC1-201ENST00000288976 FAM160B2Q86V87 743 aa9.74□□□□□ -0.85
PTPDC1-201ENST00000288976 NECAB1Q8N987 351 aa9.74□□□□□ -0.85
PTPDC1-201ENST00000288976 RIOX1Q9H6W3 641 aa9.74□□□□□ -0.85
PTPDC1-201ENST00000288976 GPBP1L1Q9HC44 474 aaPredicted RBP9.74□□□□□ -0.85
PTPDC1-201ENST00000288976 FEM1BQ9UK73 627 aa9.74□□□□□ -0.85
PTPDC1-201ENST00000288976 THSD7BQ9C0I4 1608 aa9.74□□□□□ -0.85
PTPDC1-201ENST00000288976 CXCL11O14625 94 aa9.74□□□□□ -0.85
PTPDC1-201ENST00000288976 ITGBL1O95965 494 aaPredicted RBP9.74□□□□□ -0.85
PTPDC1-201ENST00000288976 NUCB2P80303 420 aa9.74□□□□□ -0.85
PTPDC1-201ENST00000288976 STK3Q13188 491 aa9.74□□□□□ -0.85
PTPDC1-201ENST00000288976 SLFN13Q68D06 897 aa9.74□□□□□ -0.85
PTPDC1-201ENST00000288976 ERO1BQ86YB8 467 aa9.74□□□□□ -0.85
PTPDC1-201ENST00000288976 LRRC47Q8N1G4 583 aaKnown RBP9.74□□□□□ -0.85
PTPDC1-201ENST00000288976 PROCA1Q8NCQ7 364 aaPredicted RBP9.74□□□□□ -0.85
PTPDC1-201ENST00000288976 NUP133Q8WUM0 1156 aa9.74□□□□□ -0.85
PTPDC1-201ENST00000288976 MTMR8Q96EF0 704 aa9.74□□□□□ -0.85
PTPDC1-201ENST00000288976 USP17L10C9JJH3 530 aa9.74□□□□□ -0.85
PTPDC1-201ENST00000288976 FDX1P10109 184 aa9.74□□□□□ -0.85
PTPDC1-201ENST00000288976 BACE1P56817 501 aa9.74□□□□□ -0.85
PTPDC1-201ENST00000288976 MYPNQ86TC9 1320 aa9.74□□□□□ -0.85
PTPDC1-201ENST00000288976 POTEIP0CG38 1075 aa9.73□□□□□ -0.85
PTPDC1-201ENST00000288976 POTEJP0CG39 1038 aa9.73□□□□□ -0.85
PTPDC1-201ENST00000288976 INPP5BP32019 993 aa9.73□□□□□ -0.85
PTPDC1-201ENST00000288976 CCT2P78371 535 aaKnown RBP9.73□□□□□ -0.85
PTPDC1-201ENST00000288976 SLC45A1Q9Y2W3 748 aa9.73□□□□□ -0.85
PTPDC1-201ENST00000288976 KIF3CO14782 793 aa9.73□□□□□ -0.85
PTPDC1-201ENST00000288976 TRAF1Q13077 416 aa9.73□□□□□ -0.85
PTPDC1-201ENST00000288976 C2orf69Q8N8R5 385 aa9.73□□□□□ -0.85
PTPDC1-201ENST00000288976 HHIPL1Q96JK4 782 aa9.73□□□□□ -0.85
PTPDC1-201ENST00000288976 GBA2Q9HCG7 927 aaPredicted RBP9.73□□□□□ -0.85
PTPDC1-201ENST00000288976 CHMP5Q9NZZ3 219 aa9.73□□□□□ -0.85
PTPDC1-201ENST00000288976 RLFQ13129 1914 aa9.73□□□□□ -0.85
PTPDC1-201ENST00000288976 F5H6K3 240 aa9.73□□□□□ -0.85
PTPDC1-201ENST00000288976 NDUFB10O96000 172 aa9.73□□□□□ -0.85
PTPDC1-201ENST00000288976 BMP3P12645 472 aa9.73□□□□□ -0.85
PTPDC1-201ENST00000288976 KLRC3Q07444 240 aa9.73□□□□□ -0.85
PTPDC1-201ENST00000288976 MYL10Q9BUA6 226 aa9.73□□□□□ -0.85
PTPDC1-201ENST00000288976 A0A0G2JLL6 359 aaPredicted RBP9.72□□□□□ -0.85
PTPDC1-201ENST00000288976 A0A1W2PRG0 241 aa9.72□□□□□ -0.85
PTPDC1-201ENST00000288976 SHROOM1Q2M3G4 852 aaPredicted RBP9.72□□□□□ -0.85
PTPDC1-201ENST00000288976 MAP1SQ66K74 1059 aaPredicted RBP9.72□□□□□ -0.85
PTPDC1-201ENST00000288976 PRRT2Q7Z6L0 340 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms