RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 ZNF543Q08ER8 600 aa25.42■■□□□ 1.66
PDLIM3-203ENST00000284771 SLC35G1Q2M3R5 365 aa25.42■■□□□ 1.66
PDLIM3-203ENST00000284771 KCTD1Q719H9 257 aa25.42■■□□□ 1.66
PDLIM3-203ENST00000284771 GMCL1Q96IK5 515 aa25.42■■□□□ 1.66
PDLIM3-203ENST00000284771 CPVLQ9H3G5 476 aa25.42■■□□□ 1.66
PDLIM3-203ENST00000284771 C19orf81C9J6K1 198 aa25.42■■□□□ 1.66
PDLIM3-203ENST00000284771 PPFIA3O75145 1194 aa25.42■■□□□ 1.66
PDLIM3-203ENST00000284771 PLEKHA8P1O95397 391 aa25.42■■□□□ 1.66
PDLIM3-203ENST00000284771 BECN1Q14457 450 aa25.42■■□□□ 1.66
PDLIM3-203ENST00000284771 SH3D19Q5HYK7 790 aa25.42■■□□□ 1.66
PDLIM3-203ENST00000284771 CTCFLQ8NI51 663 aaPredicted RBP25.42■■□□□ 1.66
PDLIM3-203ENST00000284771 WNK4Q96J92 1243 aa25.42■■□□□ 1.66
PDLIM3-203ENST00000284771 PARP1P09874 1014 aaKnown RBP25.41■■□□□ 1.66
PDLIM3-203ENST00000284771 FUT2Q10981 343 aa25.41■■□□□ 1.66
PDLIM3-203ENST00000284771 TTBK2Q6IQ55 1244 aa25.41■■□□□ 1.66
PDLIM3-203ENST00000284771 CXCL11O14625 94 aa25.4■■□□□ 1.66
PDLIM3-203ENST00000284771 USP14P54578 494 aa25.4■■□□□ 1.66
PDLIM3-203ENST00000284771 CCDC82Q8N4S0 544 aa25.4■■□□□ 1.66
PDLIM3-203ENST00000284771 SRBD1Q8N5C6 995 aaKnown RBP25.4■■□□□ 1.66
PDLIM3-203ENST00000284771 DCAF4Q8WV16 495 aa25.4■■□□□ 1.66
PDLIM3-203ENST00000284771 C12orf42Q96LP6 360 aa25.4■■□□□ 1.66
PDLIM3-203ENST00000284771 GPCPD1Q9NPB8 672 aa25.4■■□□□ 1.66
PDLIM3-203ENST00000284771 A0A0G2JLL6 359 aaPredicted RBP25.39■■□□□ 1.66
PDLIM3-203ENST00000284771 VCAM1P19320 739 aa25.39■■□□□ 1.66
PDLIM3-203ENST00000284771 MKRN3Q13064 507 aaKnown RBP25.39■■□□□ 1.66
PDLIM3-203ENST00000284771 PPP2R5BQ15173 497 aa25.39■■□□□ 1.66
PDLIM3-203ENST00000284771 FAM83BQ5T0W9 1011 aa25.39■■□□□ 1.66
PDLIM3-203ENST00000284771 SPRYD7Q5W111 196 aa25.39■■□□□ 1.66
PDLIM3-203ENST00000284771 TMTC3Q6ZXV5 915 aa25.39■■□□□ 1.66
PDLIM3-203ENST00000284771 PRRT2Q7Z6L0 340 aaPredicted RBP25.39■■□□□ 1.66
PDLIM3-203ENST00000284771 LPAR1Q92633 364 aa25.39■■□□□ 1.66
PDLIM3-203ENST00000284771 KLRF2D3W0D1 207 aa25.39■■□□□ 1.65
PDLIM3-203ENST00000284771 CYTH3O43739 400 aa25.39■■□□□ 1.65
PDLIM3-203ENST00000284771 BMP3P12645 472 aa25.39■■□□□ 1.65
PDLIM3-203ENST00000284771 ZNF157P51786 506 aaPredicted RBP25.39■■□□□ 1.65
PDLIM3-203ENST00000284771 MOGSQ13724 837 aa25.39■■□□□ 1.65
PDLIM3-203ENST00000284771 RGMBQ6NW40 437 aa25.39■■□□□ 1.65
PDLIM3-203ENST00000284771 SPRYD3Q8NCJ5 442 aa25.39■■□□□ 1.65
PDLIM3-203ENST00000284771 MS4A4AQ96JQ5 239 aa25.39■■□□□ 1.65
PDLIM3-203ENST00000284771 UBA5Q9GZZ9 404 aa25.39■■□□□ 1.65
PDLIM3-203ENST00000284771 FOXD4L1Q9NU39 408 aa25.39■■□□□ 1.65
PDLIM3-203ENST00000284771 RBM28Q9NW13 759 aaKnown RBP25.39■■□□□ 1.65
PDLIM3-203ENST00000284771 ABT1Q9ULW3 272 aaKnown RBP25.39■■□□□ 1.65
PDLIM3-203ENST00000284771 KIF5BP33176 963 aa25.38■■□□□ 1.65
PDLIM3-203ENST00000284771 CCDC96Q2M329 555 aa25.38■■□□□ 1.65
PDLIM3-203ENST00000284771 ASPRV1Q53RT3 343 aa25.38■■□□□ 1.65
PDLIM3-203ENST00000284771 RASAL3Q86YV0 1011 aa25.38■■□□□ 1.65
PDLIM3-203ENST00000284771 NSUN7Q8NE18 718 aaKnown RBP25.38■■□□□ 1.65
PDLIM3-203ENST00000284771 CCDC196A0A1B0GTZ2 297 aa25.37■■□□□ 1.65
PDLIM3-203ENST00000284771 JAK2O60674 1132 aa25.37■■□□□ 1.65
PDLIM3-203ENST00000284771 SLC16A2P36021 539 aa25.37■■□□□ 1.65
PDLIM3-203ENST00000284771 GPATCH4Q5T3I0 446 aaKnown RBP25.37■■□□□ 1.65
PDLIM3-203ENST00000284771 TMEM232C9JQI7 657 aa25.36■■□□□ 1.65
PDLIM3-203ENST00000284771 APLP1P51693 650 aa25.36■■□□□ 1.65
PDLIM3-203ENST00000284771 PHKBQ93100 1093 aa25.36■■□□□ 1.65
PDLIM3-203ENST00000284771 CPLX1O14810 134 aa25.36■■□□□ 1.65
PDLIM3-203ENST00000284771 WDR46O15213 610 aaKnown RBP25.36■■□□□ 1.65
PDLIM3-203ENST00000284771 DHX16O60231 1041 aaKnown RBP25.36■■□□□ 1.65
PDLIM3-203ENST00000284771 ZBTB48P10074 688 aaPredicted RBP25.36■■□□□ 1.65
PDLIM3-203ENST00000284771 IFNAR1P17181 557 aa25.36■■□□□ 1.65
PDLIM3-203ENST00000284771 TREML2Q5T2D2 321 aa25.36■■□□□ 1.65
PDLIM3-203ENST00000284771 FBXO28Q9NVF7 368 aa25.36■■□□□ 1.65
PDLIM3-203ENST00000284771 FAM155AB1AL88 458 aaPredicted RBP25.35■■□□□ 1.65
PDLIM3-203ENST00000284771 FDPSP14324 419 aaKnown RBP25.35■■□□□ 1.65
PDLIM3-203ENST00000284771 SMARCC2Q8TAQ2 1214 aa25.35■■□□□ 1.65
PDLIM3-203ENST00000284771 INTS4Q96HW7 963 aaKnown RBP25.35■■□□□ 1.65
PDLIM3-203ENST00000284771 HHIPL1Q96JK4 782 aa25.35■■□□□ 1.65
PDLIM3-203ENST00000284771 IPO9Q96P70 1041 aaKnown RBP25.35■■□□□ 1.65
PDLIM3-203ENST00000284771 RPAP3Q9H6T3 665 aaPredicted RBP25.35■■□□□ 1.65
PDLIM3-203ENST00000284771 TMOD4Q9NZQ9 345 aa25.35■■□□□ 1.65
PDLIM3-203ENST00000284771 LOC285556D6RIA3 1793 aa25.34■■□□□ 1.65
PDLIM3-203ENST00000284771 SNAPC2Q13487 334 aa25.34■■□□□ 1.65
PDLIM3-203ENST00000284771 BTNL9Q6UXG8 535 aa25.34■■□□□ 1.65
PDLIM3-203ENST00000284771 LLPHQ9BRT6 129 aaKnown RBP25.34■■□□□ 1.65
PDLIM3-203ENST00000284771 RIOX1Q9H6W3 641 aa25.34■■□□□ 1.65
PDLIM3-203ENST00000284771 CREBZFQ9NS37 354 aa25.34■■□□□ 1.65
PDLIM3-203ENST00000284771 ISY1Q9ULR0 285 aaKnown RBP25.34■■□□□ 1.65
PDLIM3-203ENST00000284771 CNTNAP5Q8WYK1 1306 aa25.34■■□□□ 1.65
PDLIM3-203ENST00000284771 GNAQP50148 359 aa25.33■■□□□ 1.65
PDLIM3-203ENST00000284771 PROCA1Q8NCQ7 364 aaPredicted RBP25.33■■□□□ 1.65
PDLIM3-203ENST00000284771 hCG_1642624A0A1W2PR95 340 aa25.32■■□□□ 1.64
PDLIM3-203ENST00000284771 PTPDC1A2A3K4 754 aa25.32■■□□□ 1.64
PDLIM3-203ENST00000284771 SLC10A3P09131 477 aa25.32■■□□□ 1.64
PDLIM3-203ENST00000284771 GPAT2Q6NUI2 795 aa25.32■■□□□ 1.64
PDLIM3-203ENST00000284771 GADL1Q6ZQY3 521 aa25.32■■□□□ 1.64
PDLIM3-203ENST00000284771 ADGRF4Q8IZF3 695 aa25.32■■□□□ 1.64
PDLIM3-203ENST00000284771 DDX11Q96FC9 970 aa25.32■■□□□ 1.64
PDLIM3-203ENST00000284771 LZTS2Q9BRK4 669 aa25.32■■□□□ 1.64
PDLIM3-203ENST00000284771 SPZ1Q9BXG8 430 aa25.32■■□□□ 1.64
PDLIM3-203ENST00000284771 VAT1LQ9HCJ6 419 aa25.32■■□□□ 1.64
PDLIM3-203ENST00000284771 RLFQ13129 1914 aa25.32■■□□□ 1.64
PDLIM3-203ENST00000284771 SMARCA1P28370 1054 aa25.32■■□□□ 1.64
PDLIM3-203ENST00000284771 STAT2P52630 851 aa25.32■■□□□ 1.64
PDLIM3-203ENST00000284771 GTF2A2P52657 109 aa25.32■■□□□ 1.64
PDLIM3-203ENST00000284771 CATSPERGQ6ZRH7 1159 aa25.32■■□□□ 1.64
PDLIM3-203ENST00000284771 JMJD4Q9H9V9 463 aa25.32■■□□□ 1.64
PDLIM3-203ENST00000284771 V9GY48 417 aaPredicted RBP25.32■■□□□ 1.64
PDLIM3-203ENST00000284771 PARP14Q460N5 1801 aa25.31■■□□□ 1.64
PDLIM3-203ENST00000284771 PLA2G6O60733 806 aa25.31■■□□□ 1.64
PDLIM3-203ENST00000284771 BRI3BPQ8WY22 251 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms