RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 NT5DC1Q5TFE4 455 aa12.84□□□□□ -0.35
SCLT1-201ENST00000281142 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.84□□□□□ -0.35
SCLT1-201ENST00000281142 TTLL11Q8NHH1 800 aa12.84□□□□□ -0.35
SCLT1-201ENST00000281142 IGDCC4Q8TDY8 1250 aa12.84□□□□□ -0.35
SCLT1-201ENST00000281142 ZKSCAN3Q9BRR0 538 aa12.84□□□□□ -0.35
SCLT1-201ENST00000281142 CSRNP2Q9H175 543 aa12.84□□□□□ -0.35
SCLT1-201ENST00000281142 FAM204AQ9H8W3 233 aa12.84□□□□□ -0.35
SCLT1-201ENST00000281142 LY9Q9HBG7 655 aa12.84□□□□□ -0.35
SCLT1-201ENST00000281142 CTAGE9A4FU28 777 aa12.84□□□□□ -0.35
SCLT1-201ENST00000281142 EIF3CLB5ME19 914 aaKnown RBP12.84□□□□□ -0.35
SCLT1-201ENST00000281142 PTPREP23469 700 aa12.84□□□□□ -0.35
SCLT1-201ENST00000281142 MCAMP43121 646 aa12.84□□□□□ -0.35
SCLT1-201ENST00000281142 TTC31Q49AM3 519 aaPredicted RBP12.84□□□□□ -0.35
SCLT1-201ENST00000281142 GOLGA6L1Q8N7Z2 621 aa12.84□□□□□ -0.35
SCLT1-201ENST00000281142 EIF3CQ99613 913 aaKnown RBP12.84□□□□□ -0.35
SCLT1-201ENST00000281142 MTFR1LQ9H019 292 aa12.84□□□□□ -0.35
SCLT1-201ENST00000281142 SOCS7O14512 581 aa12.83□□□□□ -0.36
SCLT1-201ENST00000281142 CDKL5O76039 1030 aa12.83□□□□□ -0.36
SCLT1-201ENST00000281142 CSF1RP07333 972 aa12.83□□□□□ -0.36
SCLT1-201ENST00000281142 CTDSPL2Q05D32 466 aa12.83□□□□□ -0.36
SCLT1-201ENST00000281142 TMEM67Q5HYA8 995 aa12.83□□□□□ -0.36
SCLT1-201ENST00000281142 RASGRP2Q7LDG7 609 aa12.83□□□□□ -0.36
SCLT1-201ENST00000281142 EPSTI1Q96J88 318 aa12.83□□□□□ -0.36
SCLT1-201ENST00000281142 HINFPQ9BQA5 517 aa12.83□□□□□ -0.36
SCLT1-201ENST00000281142 HDAC6Q9UBN7 1215 aa12.83□□□□□ -0.36
SCLT1-201ENST00000281142 ADD3Q9UEY8 706 aaKnown RBP12.83□□□□□ -0.36
SCLT1-201ENST00000281142 SPEF2Q9C093 1822 aa12.83□□□□□ -0.36
SCLT1-201ENST00000281142 PBX1P40424 430 aa12.83□□□□□ -0.36
SCLT1-201ENST00000281142 ARHGAP25P42331 645 aa12.83□□□□□ -0.36
SCLT1-201ENST00000281142 GREM2Q9H772 168 aa12.83□□□□□ -0.36
SCLT1-201ENST00000281142 CTAGE15A4D2H0 777 aa12.82□□□□□ -0.36
SCLT1-201ENST00000281142 ENC1O14682 589 aa12.82□□□□□ -0.36
SCLT1-201ENST00000281142 ERLIN1O75477 346 aa12.82□□□□□ -0.36
SCLT1-201ENST00000281142 ZMYND10O75800 440 aa12.82□□□□□ -0.36
SCLT1-201ENST00000281142 ZFYP08048 801 aaPredicted RBP12.82□□□□□ -0.36
SCLT1-201ENST00000281142 CTAGE8P0CG41 777 aa12.82□□□□□ -0.36
SCLT1-201ENST00000281142 SART3Q15020 963 aaKnown RBP12.82□□□□□ -0.36
SCLT1-201ENST00000281142 CPLX2Q6PUV4 134 aaKnown RBP12.82□□□□□ -0.36
SCLT1-201ENST00000281142 CTAGE6Q86UF2 777 aa12.82□□□□□ -0.36
SCLT1-201ENST00000281142 CTAGE4Q8IX94 777 aa12.82□□□□□ -0.36
SCLT1-201ENST00000281142 GSPT2Q8IYD1 628 aaKnown RBP12.82□□□□□ -0.36
SCLT1-201ENST00000281142 SLF1Q9BQI6 1058 aa12.82□□□□□ -0.36
SCLT1-201ENST00000281142 HOOK1Q9UJC3 728 aaKnown RBP12.82□□□□□ -0.36
SCLT1-201ENST00000281142 SYNRGQ9UMZ2 1314 aa12.82□□□□□ -0.36
SCLT1-201ENST00000281142 COL11A2P13942 1736 aaPredicted RBP12.82□□□□□ -0.36
SCLT1-201ENST00000281142 EIF3JO75822 258 aaKnown RBP12.82□□□□□ -0.36
SCLT1-201ENST00000281142 IDH1O75874 414 aaKnown RBP12.82□□□□□ -0.36
SCLT1-201ENST00000281142 MAGEA9P43362 315 aa12.82□□□□□ -0.36
SCLT1-201ENST00000281142 SSRP1Q08945 709 aaKnown RBP12.82□□□□□ -0.36
SCLT1-201ENST00000281142 PIH1D3Q9NQM4 214 aaKnown RBP12.82□□□□□ -0.36
SCLT1-201ENST00000281142 WNT7AO00755 349 aa12.82□□□□□ -0.36
SCLT1-201ENST00000281142 MMP1P03956 469 aa12.82□□□□□ -0.36
SCLT1-201ENST00000281142 AKAP17AQ02040 695 aaKnown RBP12.82□□□□□ -0.36
SCLT1-201ENST00000281142 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.82□□□□□ -0.362e-6■■□□□ 12.4
SCLT1-201ENST00000281142 NAPGQ99747 312 aaPredicted RBP12.82□□□□□ -0.36
SCLT1-201ENST00000281142 RIC1Q4ADV7 1423 aa12.81□□□□□ -0.36
SCLT1-201ENST00000281142 SRGAP2O75044 1071 aa12.81□□□□□ -0.36
SCLT1-201ENST00000281142 IVLP07476 585 aa12.81□□□□□ -0.36
SCLT1-201ENST00000281142 CUL4BQ13620 913 aa12.81□□□□□ -0.36
SCLT1-201ENST00000281142 CCDC57Q2TAC2 916 aa12.81□□□□□ -0.36
SCLT1-201ENST00000281142 GPATCH11Q8N954 259 aa12.81□□□□□ -0.36
SCLT1-201ENST00000281142 ZSWIM5Q9P217 1185 aa12.81□□□□□ -0.36
SCLT1-201ENST00000281142 DACH1Q9UI36 760 aa12.81□□□□□ -0.36
SCLT1-201ENST00000281142 RNF40O75150 1001 aa12.81□□□□□ -0.36
SCLT1-201ENST00000281142 CIAO1O76071 339 aa12.81□□□□□ -0.36
SCLT1-201ENST00000281142 MYCNP04198 464 aaPredicted RBP12.81□□□□□ -0.36
SCLT1-201ENST00000281142 HSP90B2PQ58FF3 399 aa12.81□□□□□ -0.36
SCLT1-201ENST00000281142 SPATA1Q5VX52 437 aa12.81□□□□□ -0.36
SCLT1-201ENST00000281142 SHISA4Q96DD7 197 aa12.81□□□□□ -0.36
SCLT1-201ENST00000281142 NLRP3Q96P20 1036 aa12.81□□□□□ -0.36
SCLT1-201ENST00000281142 CHP1Q99653 195 aa12.81□□□□□ -0.36
SCLT1-201ENST00000281142 SGIP1Q9BQI5 828 aa12.81□□□□□ -0.36
SCLT1-201ENST00000281142 VPS16Q9H269 839 aa12.81□□□□□ -0.36
SCLT1-201ENST00000281142 RABEP2Q9H5N1 569 aa12.81□□□□□ -0.36
SCLT1-201ENST00000281142 CABP5Q9NP86 173 aa12.81□□□□□ -0.36
SCLT1-201ENST00000281142 WWC3Q9ULE0 1092 aa12.81□□□□□ -0.36
SCLT1-201ENST00000281142 WDR19Q8NEZ3 1342 aa12.81□□□□□ -0.36
SCLT1-201ENST00000281142 hCG_1642624A0A1W2PR95 340 aa12.8□□□□□ -0.36
SCLT1-201ENST00000281142 IFIT3O14879 490 aaKnown RBP12.8□□□□□ -0.36
SCLT1-201ENST00000281142 SYF2O95926 243 aaKnown RBP12.8□□□□□ -0.36
SCLT1-201ENST00000281142 ADD2P35612 726 aa12.8□□□□□ -0.36
SCLT1-201ENST00000281142 NOM1Q5C9Z4 860 aaKnown RBP12.8□□□□□ -0.36
SCLT1-201ENST00000281142 EARS2Q5JPH6 523 aaKnown RBP12.8□□□□□ -0.36
SCLT1-201ENST00000281142 RRP12Q5JTH9 1297 aaKnown RBP12.8□□□□□ -0.36
SCLT1-201ENST00000281142 FAM71BQ8TC56 605 aa12.8□□□□□ -0.36
SCLT1-201ENST00000281142 CTNND2Q9UQB3 1225 aa12.8□□□□□ -0.36
SCLT1-201ENST00000281142 SLC12A7Q9Y666 1083 aa12.8□□□□□ -0.36
SCLT1-201ENST00000281142 KIF13BQ9NQT8 1826 aa12.8□□□□□ -0.36
SCLT1-201ENST00000281142 MYH7P12883 1935 aa12.8□□□□□ -0.36
SCLT1-201ENST00000281142 FMNL1O95466 1100 aaPredicted RBP12.8□□□□□ -0.36
SCLT1-201ENST00000281142 ITGA6P23229 1130 aa12.8□□□□□ -0.36
SCLT1-201ENST00000281142 AMPD2Q01433 879 aa12.8□□□□□ -0.36
SCLT1-201ENST00000281142 SF3B3Q15393 1217 aaKnown RBP12.8□□□□□ -0.36
SCLT1-201ENST00000281142 CDKAL1Q5VV42 579 aa12.8□□□□□ -0.36
SCLT1-201ENST00000281142 SPATA20Q8TB22 786 aa12.8□□□□□ -0.36
SCLT1-201ENST00000281142 ZNF532Q9HCE3 1301 aa12.8□□□□□ -0.36
SCLT1-201ENST00000281142 POTEB2H3BUK9 544 aa12.8□□□□□ -0.36
SCLT1-201ENST00000281142 RPS6KA5O75582 802 aa12.8□□□□□ -0.36
SCLT1-201ENST00000281142 ERCC5P28715 1186 aaPredicted RBP12.8□□□□□ -0.36
SCLT1-201ENST00000281142 PTGER2P43116 358 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms