RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 CCDC146Q8IYE0 955 aa12.48□□□□□ -0.41
LRTM1-201ENST00000273286 RGL4Q8IZJ4 473 aa12.48□□□□□ -0.41
LRTM1-201ENST00000273286 CAPNS2Q96L46 248 aa12.48□□□□□ -0.41
LRTM1-201ENST00000273286 ISCA1Q9BUE6 129 aa12.48□□□□□ -0.41
LRTM1-201ENST00000273286 C11orf16Q9NQ32 467 aa12.48□□□□□ -0.41
LRTM1-201ENST00000273286 A0A0A0MRY4 1105 aa12.47□□□□□ -0.41
LRTM1-201ENST00000273286 CA12O43570 354 aa12.47□□□□□ -0.41
LRTM1-201ENST00000273286 ATG7O95352 703 aa12.47□□□□□ -0.41
LRTM1-201ENST00000273286 LBX1P52954 281 aa12.47□□□□□ -0.41
LRTM1-201ENST00000273286 MLLT1Q03111 559 aaPredicted RBP12.47□□□□□ -0.41
LRTM1-201ENST00000273286 DDX10Q13206 875 aaKnown RBP12.47□□□□□ -0.41
LRTM1-201ENST00000273286 CDC37L1Q7L3B6 337 aa12.47□□□□□ -0.41
LRTM1-201ENST00000273286 DPF2Q92785 391 aa12.47□□□□□ -0.41
LRTM1-201ENST00000273286 GPR101Q96P66 508 aaPredicted RBP12.47□□□□□ -0.41
LRTM1-201ENST00000273286 EYA3Q99504 573 aa12.47□□□□□ -0.41
LRTM1-201ENST00000273286 RPS12P25398 132 aaKnown RBP12.46□□□□□ -0.41
LRTM1-201ENST00000273286 DUSP27Q5VZP5 1158 aa12.46□□□□□ -0.41
LRTM1-201ENST00000273286 CST9Q5W186 159 aa12.46□□□□□ -0.41
LRTM1-201ENST00000273286 SAPCD2Q86UD0 394 aa12.46□□□□□ -0.41
LRTM1-201ENST00000273286 CMTR1Q8N1G2 835 aaKnown RBP12.46□□□□□ -0.41
LRTM1-201ENST00000273286 MKNK1Q9BUB5 465 aa12.46□□□□□ -0.41
LRTM1-201ENST00000273286 RAD17O75943 681 aa12.45□□□□□ -0.42
LRTM1-201ENST00000273286 HSPA8P11142 646 aaKnown RBP12.45□□□□□ -0.42
LRTM1-201ENST00000273286 RAC1P63000 192 aa12.45□□□□□ -0.42
LRTM1-201ENST00000273286 GNAI1P63096 354 aa12.45□□□□□ -0.42
LRTM1-201ENST00000273286 KRT24Q2M2I5 525 aa12.45□□□□□ -0.42
LRTM1-201ENST00000273286 TMEM164Q5U3C3 297 aa12.45□□□□□ -0.42
LRTM1-201ENST00000273286 CCDC97Q96F63 343 aaPredicted RBP12.45□□□□□ -0.42
LRTM1-201ENST00000273286 FAM89AQ96GI7 184 aa12.45□□□□□ -0.42
LRTM1-201ENST00000273286 SAP130Q9H0E3 1048 aa12.45□□□□□ -0.42
LRTM1-201ENST00000273286 IFT57Q9NWB7 429 aa12.45□□□□□ -0.42
LRTM1-201ENST00000273286 CNOT7Q9UIV1 285 aaKnown RBP12.45□□□□□ -0.42
LRTM1-201ENST00000273286 DDX60Q8IY21 1712 aaKnown RBP12.45□□□□□ -0.42
LRTM1-201ENST00000273286 ZBTB42B2RXF5 422 aa12.45□□□□□ -0.42
LRTM1-201ENST00000273286 TRAF5O00463 557 aa12.45□□□□□ -0.42
LRTM1-201ENST00000273286 CELF2O95319 508 aaKnown RBP12.45□□□□□ -0.42
LRTM1-201ENST00000273286 GPLD1P80108 840 aa12.45□□□□□ -0.42
LRTM1-201ENST00000273286 C16orf46Q6P387 395 aa12.45□□□□□ -0.42
LRTM1-201ENST00000273286 ZBTB38Q8NAP3 1195 aaPredicted RBP12.45□□□□□ -0.42
LRTM1-201ENST00000273286 TRPM4Q8TD43 1214 aa12.45□□□□□ -0.42
LRTM1-201ENST00000273286 LPIN3Q9BQK8 851 aa12.45□□□□□ -0.42
LRTM1-201ENST00000273286 CXXC1Q9P0U4 656 aaPredicted RBP12.45□□□□□ -0.42
LRTM1-201ENST00000273286 DUOX1Q9NRD9 1551 aa12.44□□□□□ -0.42
LRTM1-201ENST00000273286 IRS4O14654 1257 aaPredicted RBP12.44□□□□□ -0.42
LRTM1-201ENST00000273286 XYLBO75191 536 aa12.44□□□□□ -0.42
LRTM1-201ENST00000273286 DDX58O95786 925 aaKnown RBP12.44□□□□□ -0.42
LRTM1-201ENST00000273286 ZNF853P0CG23 659 aa12.44□□□□□ -0.42
LRTM1-201ENST00000273286 RPS8P62241 208 aaKnown RBP12.44□□□□□ -0.42
LRTM1-201ENST00000273286 PERM1Q5SV97 790 aa12.44□□□□□ -0.42
LRTM1-201ENST00000273286 CYP4F22Q6NT55 531 aa12.44□□□□□ -0.42
LRTM1-201ENST00000273286 SLC51AQ86UW1 340 aa12.44□□□□□ -0.42
LRTM1-201ENST00000273286 CCDC191Q8NCU4 936 aa12.44□□□□□ -0.42
LRTM1-201ENST00000273286 YDJCA8MPS7 323 aa12.43□□□□□ -0.42
LRTM1-201ENST00000273286 ELNP15502 786 aa12.43□□□□□ -0.42
LRTM1-201ENST00000273286 NOGQ13253 232 aa12.43□□□□□ -0.42
LRTM1-201ENST00000273286 ELMSAN1Q6PJG2 1045 aa12.43□□□□□ -0.42
LRTM1-201ENST00000273286 ETFBKMTQ8IXQ9 262 aa12.43□□□□□ -0.42
LRTM1-201ENST00000273286 DMRTC2Q8IXT2 367 aaPredicted RBP12.43□□□□□ -0.42
LRTM1-201ENST00000273286 CELF1Q92879 486 aaKnown RBP12.43□□□□□ -0.42
LRTM1-201ENST00000273286 GLIS2Q9BZE0 524 aaPredicted RBP12.43□□□□□ -0.42
LRTM1-201ENST00000273286 SEMA6BQ9H3T3 888 aa12.43□□□□□ -0.42
LRTM1-201ENST00000273286 PRKRIP1Q9H875 184 aaPredicted RBP12.43□□□□□ -0.42
LRTM1-201ENST00000273286 PODXL2Q9NZ53 605 aa12.43□□□□□ -0.42
LRTM1-201ENST00000273286 FRRS1LQ9P0K9 344 aa12.43□□□□□ -0.42
LRTM1-201ENST00000273286 EGFRP00533 1210 aa12.42□□□□□ -0.42
LRTM1-201ENST00000273286 ARID4AP29374 1257 aaPredicted RBP12.42□□□□□ -0.42
LRTM1-201ENST00000273286 GRM1Q13255 1194 aa12.42□□□□□ -0.42
LRTM1-201ENST00000273286 CCDC152Q4G0S7 254 aa12.42□□□□□ -0.42
LRTM1-201ENST00000273286 COL26A1Q96A83 441 aa12.42□□□□□ -0.42
LRTM1-201ENST00000273286 PBXIP1Q96AQ6 731 aa12.42□□□□□ -0.42
LRTM1-201ENST00000273286 ZC3H12CQ9C0D7 883 aaKnown RBP12.42□□□□□ -0.42
LRTM1-201ENST00000273286 TPSG1Q9NRR2 321 aa12.42□□□□□ -0.42
LRTM1-201ENST00000273286 PSMD14O00487 310 aa12.41□□□□□ -0.42
LRTM1-201ENST00000273286 PCCAP05165 728 aaPredicted RBP12.41□□□□□ -0.42
LRTM1-201ENST00000273286 BRD2P25440 801 aaKnown RBP12.41□□□□□ -0.42
LRTM1-201ENST00000273286 FMR1Q06787 632 aaKnown RBP eCLIP12.41□□□□□ -0.42
LRTM1-201ENST00000273286 CCDC30Q5VVM6 783 aa12.41□□□□□ -0.42
LRTM1-201ENST00000273286 CAPN12Q6ZSI9 719 aa12.41□□□□□ -0.42
LRTM1-201ENST00000273286 HFE2Q6ZVN8 426 aa12.41□□□□□ -0.42
LRTM1-201ENST00000273286 DCPSQ96C86 337 aaKnown RBP12.41□□□□□ -0.42
LRTM1-201ENST00000273286 DBNDD1Q9H9R9 158 aa12.41□□□□□ -0.42
LRTM1-201ENST00000273286 POLLQ9UGP5 575 aa12.41□□□□□ -0.42
LRTM1-201ENST00000273286 KCNMB2Q9Y691 235 aa12.41□□□□□ -0.42
LRTM1-201ENST00000273286 TAF1P21675 1872 aa12.41□□□□□ -0.42
LRTM1-201ENST00000273286 C9orf172C9J069 976 aa12.4□□□□□ -0.42
LRTM1-201ENST00000273286 APAF1O14727 1248 aa12.4□□□□□ -0.42
LRTM1-201ENST00000273286 ECE2O60344 883 aa12.4□□□□□ -0.42
LRTM1-201ENST00000273286 PDE8AO60658 829 aa12.4□□□□□ -0.42
LRTM1-201ENST00000273286 SELPP16109 830 aa12.4□□□□□ -0.42
LRTM1-201ENST00000273286 NRLP54845 237 aa12.4□□□□□ -0.42
LRTM1-201ENST00000273286 GPSM2P81274 684 aa12.4□□□□□ -0.42
LRTM1-201ENST00000273286 PLAURQ03405 335 aa12.4□□□□□ -0.42
LRTM1-201ENST00000273286 TBC1D16Q8TBP0 767 aa12.4□□□□□ -0.42
LRTM1-201ENST00000273286 ABHD8Q96I13 439 aa12.4□□□□□ -0.42
LRTM1-201ENST00000273286 ZNF408Q9H9D4 720 aa12.4□□□□□ -0.42
LRTM1-201ENST00000273286 CWC25Q9NXE8 425 aaPredicted RBP12.4□□□□□ -0.42
LRTM1-201ENST00000273286 TLR7Q9NYK1 1049 aaKnown RBP12.4□□□□□ -0.42
LRTM1-201ENST00000273286 ZNF609O15014 1411 aa12.4□□□□□ -0.42
LRTM1-201ENST00000273286 EIF2AK2P19525 551 aaKnown RBP12.39□□□□□ -0.43
LRTM1-201ENST00000273286 NAA30Q147X3 362 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms