RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 SPZ1Q9BXG8 430 aa17.27■□□□□ 0.36
UBR3-201ENST00000272793 ECHDC1Q9NTX5 307 aa17.27■□□□□ 0.36
UBR3-201ENST00000272793 WARS2Q9UGM6 360 aaKnown RBP17.27■□□□□ 0.36
UBR3-201ENST00000272793 IQSEC3Q9UPP2 1182 aaPredicted RBP17.27■□□□□ 0.36
UBR3-201ENST00000272793 M0QZ92 97 aa17.27■□□□□ 0.36
UBR3-201ENST00000272793 IGHDP01880 384 aa17.27■□□□□ 0.36
UBR3-201ENST00000272793 TBC1D8BQ0IIM8 1120 aa17.27■□□□□ 0.36
UBR3-201ENST00000272793 ALKBH8Q96BT7 664 aaKnown RBP17.27■□□□□ 0.36
UBR3-201ENST00000272793 EIF3CLB5ME19 914 aaKnown RBP17.27■□□□□ 0.35
UBR3-201ENST00000272793 OCRLQ01968 901 aa17.27■□□□□ 0.35
UBR3-201ENST00000272793 TAF11Q15544 211 aa17.27■□□□□ 0.35
UBR3-201ENST00000272793 RBM26Q5T8P6 1007 aaKnown RBP17.27■□□□□ 0.35
UBR3-201ENST00000272793 NOSTRINQ8IVI9 506 aa17.27■□□□□ 0.35
UBR3-201ENST00000272793 TMC2Q8TDI7 906 aa17.27■□□□□ 0.35
UBR3-201ENST00000272793 HEXIM1O94992 359 aaKnown RBP17.27■□□□□ 0.35
UBR3-201ENST00000272793 GNAQP50148 359 aa17.27■□□□□ 0.35
UBR3-201ENST00000272793 NME8Q8N427 588 aa17.27■□□□□ 0.35
UBR3-201ENST00000272793 ZRANB1Q9UGI0 708 aa17.27■□□□□ 0.35
UBR3-201ENST00000272793 A0A1B0GVL5 298 aa17.27■□□□□ 0.35
UBR3-201ENST00000272793 TTC22Q5TAA0 569 aa17.27■□□□□ 0.35
UBR3-201ENST00000272793 TRIM27P14373 513 aa17.26■□□□□ 0.35
UBR3-201ENST00000272793 TCF3P15923 654 aa17.26■□□□□ 0.35
UBR3-201ENST00000272793 IFIH1Q9BYX4 1025 aaKnown RBP17.26■□□□□ 0.35
UBR3-201ENST00000272793 RIC8AQ9NPQ8 531 aa17.26■□□□□ 0.35
UBR3-201ENST00000272793 PUM3Q15397 648 aaKnown RBP17.26■□□□□ 0.35
UBR3-201ENST00000272793 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.26■□□□□ 0.35
UBR3-201ENST00000272793 ATP11BQ9Y2G3 1177 aa17.26■□□□□ 0.35
UBR3-201ENST00000272793 GCNT3O95395 438 aa17.26■□□□□ 0.35
UBR3-201ENST00000272793 ADCY8P40145 1251 aa17.26■□□□□ 0.35
UBR3-201ENST00000272793 ARHGEF3Q9NR81 526 aa17.26■□□□□ 0.35
UBR3-201ENST00000272793 VWA3AA6NCI4 1184 aa17.26■□□□□ 0.35
UBR3-201ENST00000272793 TRIM75PA6NK02 468 aa17.26■□□□□ 0.35
UBR3-201ENST00000272793 IGSF22Q8N9C0 903 aa17.26■□□□□ 0.35
UBR3-201ENST00000272793 TSC22D3Q99576 134 aa17.26■□□□□ 0.35
UBR3-201ENST00000272793 CCDC90BQ9GZT6 254 aa17.26■□□□□ 0.35
UBR3-201ENST00000272793 APLFQ8IW19 511 aaPredicted RBP17.26■□□□□ 0.35
UBR3-201ENST00000272793 ENOX1Q8TC92 643 aaKnown RBP17.26■□□□□ 0.35
UBR3-201ENST00000272793 SLC4A4Q9Y6R1 1079 aa17.26■□□□□ 0.35
UBR3-201ENST00000272793 LDHAL6AQ6ZMR3 332 aa17.25■□□□□ 0.35
UBR3-201ENST00000272793 NAF1Q96HR8 494 aaKnown RBP17.25■□□□□ 0.35
UBR3-201ENST00000272793 LONRF2Q1L5Z9 754 aa17.25■□□□□ 0.35
UBR3-201ENST00000272793 TRAF7Q6Q0C0 670 aa17.25■□□□□ 0.35
UBR3-201ENST00000272793 ZBTB3Q9H5J0 574 aa17.25■□□□□ 0.35
UBR3-201ENST00000272793 RHOBTB1O94844 696 aa17.25■□□□□ 0.35
UBR3-201ENST00000272793 RFC4P35249 363 aa17.25■□□□□ 0.35
UBR3-201ENST00000272793 SLC9C1Q4G0N8 1177 aa17.25■□□□□ 0.35
UBR3-201ENST00000272793 TRIM42Q8IWZ5 723 aa17.25■□□□□ 0.35
UBR3-201ENST00000272793 CHCHD3Q9NX63 227 aaKnown RBP17.25■□□□□ 0.35
UBR3-201ENST00000272793 HMG20BQ9P0W2 317 aa17.25■□□□□ 0.35
UBR3-201ENST00000272793 DDAH1O94760 285 aa17.25■□□□□ 0.35
UBR3-201ENST00000272793 TTLL11Q8NHH1 800 aa17.25■□□□□ 0.35
UBR3-201ENST00000272793 NCF2P19878 526 aaPredicted RBP17.25■□□□□ 0.35
UBR3-201ENST00000272793 SDSP20132 328 aa17.25■□□□□ 0.35
UBR3-201ENST00000272793 TTC30AQ86WT1 665 aa17.25■□□□□ 0.35
UBR3-201ENST00000272793 ZGPATQ8N5A5 531 aaKnown RBP17.25■□□□□ 0.35
UBR3-201ENST00000272793 HOMER3Q9NSC5 361 aa17.25■□□□□ 0.35
UBR3-201ENST00000272793 IFNA8P32881 189 aa17.25■□□□□ 0.35
UBR3-201ENST00000272793 MECOMQ03112 1051 aa17.25■□□□□ 0.35
UBR3-201ENST00000272793 CCPG1Q9ULG6 757 aa17.25■□□□□ 0.35
UBR3-201ENST00000272793 CNNM2Q9H8M5 875 aa17.24■□□□□ 0.35
UBR3-201ENST00000272793 UBXN8O00124 270 aa17.24■□□□□ 0.35
UBR3-201ENST00000272793 E2F6O75461 281 aa17.24■□□□□ 0.35
UBR3-201ENST00000272793 CNNM4Q6P4Q7 775 aa17.24■□□□□ 0.35
UBR3-201ENST00000272793 RPS6KC1Q96S38 1066 aa17.24■□□□□ 0.35
UBR3-201ENST00000272793 RRAGDQ9NQL2 400 aaPredicted RBP17.24■□□□□ 0.35
UBR3-201ENST00000272793 KIF19Q2TAC6 998 aa17.24■□□□□ 0.35
UBR3-201ENST00000272793 OSBPL10Q9BXB5 764 aa17.24■□□□□ 0.35
UBR3-201ENST00000272793 POC1B-GALNT4F8VUJ3 575 aa17.24■□□□□ 0.35
UBR3-201ENST00000272793 RANBP1P43487 201 aa17.24■□□□□ 0.35
UBR3-201ENST00000272793 BRDTQ58F21 947 aaPredicted RBP17.24■□□□□ 0.35
UBR3-201ENST00000272793 CD19P15391 556 aa17.24■□□□□ 0.35
UBR3-201ENST00000272793 TSC1Q92574 1164 aa17.24■□□□□ 0.35
UBR3-201ENST00000272793 CYTH2Q99418 400 aa17.24■□□□□ 0.35
UBR3-201ENST00000272793 PTPN22Q9Y2R2 807 aa17.24■□□□□ 0.35
UBR3-201ENST00000272793 HYOU1Q9Y4L1 999 aa17.24■□□□□ 0.35
UBR3-201ENST00000272793 DDX39AO00148 427 aaKnown RBP17.24■□□□□ 0.35
UBR3-201ENST00000272793 P4HA1P13674 534 aa17.24■□□□□ 0.35
UBR3-201ENST00000272793 CYP7A1P22680 504 aa17.24■□□□□ 0.35
UBR3-201ENST00000272793 VCPP55072 806 aaKnown RBP17.24■□□□□ 0.35
UBR3-201ENST00000272793 ADAT2Q7Z6V5 191 aaKnown RBP17.24■□□□□ 0.35
UBR3-201ENST00000272793 TCP11Q8WWU5 503 aa17.24■□□□□ 0.35
UBR3-201ENST00000272793 HACD3Q9P035 362 aa17.24■□□□□ 0.35
UBR3-201ENST00000272793 TBC1D7Q9P0N9 293 aa17.24■□□□□ 0.35
UBR3-201ENST00000272793 RBM8AQ9Y5S9 174 aaKnown RBP17.24■□□□□ 0.35
UBR3-201ENST00000272793 FYCO1Q9BQS8 1478 aa17.24■□□□□ 0.35
UBR3-201ENST00000272793 DEPDC1Q5TB30 811 aa17.24■□□□□ 0.35
UBR3-201ENST00000272793 INHBAP08476 426 aa17.23■□□□□ 0.35
UBR3-201ENST00000272793 SECISBP2LQ93073 1101 aaKnown RBP17.23■□□□□ 0.35
UBR3-201ENST00000272793 TYW1Q9NV66 732 aaKnown RBP17.23■□□□□ 0.35
UBR3-201ENST00000272793 BAZ1AQ9NRL2 1556 aaPredicted RBP17.23■□□□□ 0.35
UBR3-201ENST00000272793 PDCLQ13371 301 aa17.23■□□□□ 0.35
UBR3-201ENST00000272793 RPS6KA1Q15418 735 aa17.23■□□□□ 0.35
UBR3-201ENST00000272793 PATL1Q86TB9 770 aaKnown RBP17.23■□□□□ 0.35
UBR3-201ENST00000272793 ADCK1Q86TW2 530 aa17.23■□□□□ 0.35
UBR3-201ENST00000272793 ST13P4Q8IZP2 240 aaPredicted RBP17.23■□□□□ 0.35
UBR3-201ENST00000272793 DNAJC6O75061 913 aa17.23■□□□□ 0.35
UBR3-201ENST00000272793 GNGT1P63211 74 aa17.23■□□□□ 0.35
UBR3-201ENST00000272793 PPP1R42Q7Z4L9 355 aa17.23■□□□□ 0.35
UBR3-201ENST00000272793 NDEL1Q9GZM8 345 aa17.23■□□□□ 0.35
UBR3-201ENST00000272793 LZTS1Q9Y250 596 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms