RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 CDC23Q9UJX2 597 aa25.05■■□□□ 1.6
CDR2-201ENST00000268383 DUOX1Q9NRD9 1551 aa25.05■■□□□ 1.6
CDR2-201ENST00000268383 BCL9LQ86UU0 1499 aa25.05■■□□□ 1.6
CDR2-201ENST00000268383 MYH14Q7Z406 1995 aaKnown RBP25.05■■□□□ 1.6
CDR2-201ENST00000268383 CCDC24Q8N4L8 307 aa25.05■■□□□ 1.6
CDR2-201ENST00000268383 CTAGE1Q96RT6 745 aa25.05■■□□□ 1.6
CDR2-201ENST00000268383 CACNA1SQ13698 1873 aa25.04■■□□□ 1.6
CDR2-201ENST00000268383 COPB1P53618 953 aaKnown RBP25.04■■□□□ 1.6
CDR2-201ENST00000268383 IQUBQ8NA54 791 aa25.04■■□□□ 1.6
CDR2-201ENST00000268383 FAM84BQ96KN1 310 aaPredicted RBP25.04■■□□□ 1.6
CDR2-201ENST00000268383 ABHD10Q9NUJ1 306 aa25.04■■□□□ 1.6
CDR2-201ENST00000268383 FAM205AQ6ZU69 1335 aa25.04■■□□□ 1.6
CDR2-201ENST00000268383 PES1O00541 588 aaKnown RBP25.04■■□□□ 1.6
CDR2-201ENST00000268383 TFCP2L1Q9NZI6 479 aa25.04■■□□□ 1.6
CDR2-201ENST00000268383 ZNF804BA4D1E1 1349 aa25.03■■□□□ 1.6
CDR2-201ENST00000268383 CNGA4Q8IV77 575 aa25.03■■□□□ 1.6
CDR2-201ENST00000268383 CTCFLQ8NI51 663 aaPredicted RBP25.03■■□□□ 1.6
CDR2-201ENST00000268383 NAA15Q9BXJ9 866 aaKnown RBP25.03■■□□□ 1.6
CDR2-201ENST00000268383 KCNJ18B7U540 433 aa25.03■■□□□ 1.6
CDR2-201ENST00000268383 PRCPP42785 496 aa25.03■■□□□ 1.6
CDR2-201ENST00000268383 KCNJ12Q14500 433 aa25.03■■□□□ 1.6
CDR2-201ENST00000268383 CELF1Q92879 486 aaKnown RBP25.03■■□□□ 1.6
CDR2-201ENST00000268383 RBM28Q9NW13 759 aaKnown RBP25.03■■□□□ 1.6
CDR2-201ENST00000268383 DISP2A7MBM2 1401 aa25.03■■□□□ 1.6
CDR2-201ENST00000268383 LOC102724428A0A0B4J2F2 783 aa25.02■■□□□ 1.6
CDR2-201ENST00000268383 SCG2P13521 617 aa25.02■■□□□ 1.6
CDR2-201ENST00000268383 KRT9P35527 623 aa25.02■■□□□ 1.6
CDR2-201ENST00000268383 PMS1P54277 932 aaKnown RBP25.02■■□□□ 1.6
CDR2-201ENST00000268383 SIK1P57059 783 aa25.02■■□□□ 1.6
CDR2-201ENST00000268383 PAK1Q13153 545 aa25.02■■□□□ 1.6
CDR2-201ENST00000268383 RNF216Q9NWF9 866 aaPredicted RBP25.02■■□□□ 1.6
CDR2-201ENST00000268383 CTAGE9A4FU28 777 aa25.02■■□□□ 1.6
CDR2-201ENST00000268383 ARHGAP25P42331 645 aa25.02■■□□□ 1.6
CDR2-201ENST00000268383 NCAPH2Q6IBW4 605 aa25.02■■□□□ 1.6
CDR2-201ENST00000268383 ANKRD18AQ8IVF6 992 aa25.02■■□□□ 1.6
CDR2-201ENST00000268383 GNL3LQ9NVN8 582 aaKnown RBP25.02■■□□□ 1.6
CDR2-201ENST00000268383 MECOMQ03112 1051 aa25.01■■□□□ 1.59
CDR2-201ENST00000268383 UBXN1Q04323 297 aa25.01■■□□□ 1.59
CDR2-201ENST00000268383 PPP2R5BQ15173 497 aa25.01■■□□□ 1.59
CDR2-201ENST00000268383 TCP11X2Q5H9J9 407 aa25.01■■□□□ 1.59
CDR2-201ENST00000268383 N4BP1O75113 896 aaKnown RBP25.01■■□□□ 1.59
CDR2-201ENST00000268383 PRDX5P30044 214 aa25.01■■□□□ 1.59
CDR2-201ENST00000268383 PARP10Q53GL7 1025 aa25.01■■□□□ 1.59
CDR2-201ENST00000268383 SLC51AQ86UW1 340 aa25.01■■□□□ 1.59
CDR2-201ENST00000268383 PDE11AQ9HCR9 933 aa25.01■■□□□ 1.59
CDR2-201ENST00000268383 RPN1P04843 607 aaKnown RBP25■■□□□ 1.59
CDR2-201ENST00000268383 NOA1Q8NC60 698 aaKnown RBP25■■□□□ 1.59
CDR2-201ENST00000268383 BRIP1Q9BX63 1249 aa25■■□□□ 1.59
CDR2-201ENST00000268383 ABCB6Q9NP58 842 aa25■■□□□ 1.59
CDR2-201ENST00000268383 LIMA1Q9UHB6 759 aaKnown RBP25■■□□□ 1.59
CDR2-201ENST00000268383 MINPP1Q9UNW1 487 aa25■■□□□ 1.59
CDR2-201ENST00000268383 ENC1O14682 589 aa25■■□□□ 1.59
CDR2-201ENST00000268383 ATP8B1O43520 1251 aa25■■□□□ 1.59
CDR2-201ENST00000268383 CAVIN4Q5BKX8 364 aa25■■□□□ 1.59
CDR2-201ENST00000268383 TAF3Q5VWG9 929 aa25■■□□□ 1.59
CDR2-201ENST00000268383 STAG2Q8N3U4 1231 aa25■■□□□ 1.59
CDR2-201ENST00000268383 DCP1AQ9NPI6 582 aaPredicted RBP25■■□□□ 1.59
CDR2-201ENST00000268383 GUCA1BQ9UMX6 200 aa25■■□□□ 1.59
CDR2-201ENST00000268383 CCDC151A5D8V7 595 aa24.99■■□□□ 1.59
CDR2-201ENST00000268383 RWDD2AQ9UIY3 292 aa24.99■■□□□ 1.59
CDR2-201ENST00000268383 GTPBP6O43824 516 aaPredicted RBP24.99■■□□□ 1.59
CDR2-201ENST00000268383 BEND6Q5SZJ8 279 aaPredicted RBP24.99■■□□□ 1.59
CDR2-201ENST00000268383 TYW1BQ6NUM6 668 aa24.99■■□□□ 1.59
CDR2-201ENST00000268383 IRF2BP1Q8IU81 584 aa24.99■■□□□ 1.59
CDR2-201ENST00000268383 NSUN4Q96CB9 384 aaKnown RBP24.99■■□□□ 1.59
CDR2-201ENST00000268383 HDAC6Q9UBN7 1215 aa24.99■■□□□ 1.59
CDR2-201ENST00000268383 BMP15O95972 392 aa24.99■■□□□ 1.59
CDR2-201ENST00000268383 VSNL1P62760 191 aa24.99■■□□□ 1.59
CDR2-201ENST00000268383 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.99■■□□□ 1.59
CDR2-201ENST00000268383 REXO2Q9Y3B8 237 aaKnown RBP24.99■■□□□ 1.59
CDR2-201ENST00000268383 TSPY2A6NKD2 308 aa24.98■■□□□ 1.59
CDR2-201ENST00000268383 DDAH1O94760 285 aa24.98■■□□□ 1.59
CDR2-201ENST00000268383 PHLPP1O60346 1717 aa24.98■■□□□ 1.59
CDR2-201ENST00000268383 SEMA3EO15041 775 aa24.98■■□□□ 1.59
CDR2-201ENST00000268383 USP17L8P0C7I0 530 aa24.98■■□□□ 1.59
CDR2-201ENST00000268383 CALM1P0DP23 149 aa24.98■■□□□ 1.59
CDR2-201ENST00000268383 CALM2P0DP24 149 aa24.98■■□□□ 1.59
CDR2-201ENST00000268383 CALM3P0DP25 149 aa24.98■■□□□ 1.59
CDR2-201ENST00000268383 JAKMIP3Q5VZ66 844 aa24.98■■□□□ 1.59
CDR2-201ENST00000268383 TMTC1Q8IUR5 882 aa24.98■■□□□ 1.59
CDR2-201ENST00000268383 RASSF8Q8NHQ8 419 aa24.98■■□□□ 1.59
CDR2-201ENST00000268383 DOT1LQ8TEK3 1739 aa24.97■■□□□ 1.59
CDR2-201ENST00000268383 TTC26A0AVF1 554 aa24.97■■□□□ 1.59
CDR2-201ENST00000268383 STAT6P42226 847 aa24.97■■□□□ 1.59
CDR2-201ENST00000268383 PFKFB3Q16875 520 aaPredicted RBP24.97■■□□□ 1.59
CDR2-201ENST00000268383 CT47A1Q5JQC4 288 aaPredicted RBP24.97■■□□□ 1.59
CDR2-201ENST00000268383 ZNF658Q5TYW1 1059 aaPredicted RBP24.97■■□□□ 1.59
CDR2-201ENST00000268383 CEP112Q8N8E3 955 aa24.97■■□□□ 1.59
CDR2-201ENST00000268383 NAPGQ99747 312 aaPredicted RBP24.97■■□□□ 1.59
CDR2-201ENST00000268383 TMEM60Q9H2L4 133 aa24.97■■□□□ 1.59
CDR2-201ENST00000268383 TTF2Q9UNY4 1162 aaKnown RBP24.97■■□□□ 1.59
CDR2-201ENST00000268383 LRRC10BA6NIK2 292 aa24.97■■□□□ 1.59
CDR2-201ENST00000268383 RCSD1Q6JBY9 416 aa24.97■■□□□ 1.59
CDR2-201ENST00000268383 ITIH6Q6UXX5 1313 aa24.97■■□□□ 1.59
CDR2-201ENST00000268383 MAP2K7O14733 419 aa24.96■■□□□ 1.59
CDR2-201ENST00000268383 FGRP09769 529 aa24.96■■□□□ 1.59
CDR2-201ENST00000268383 CYP26C1Q6V0L0 522 aa24.96■■□□□ 1.59
CDR2-201ENST00000268383 C4orf32Q8N8J7 132 aa24.96■■□□□ 1.59
CDR2-201ENST00000268383 LRRC15Q8TF66 581 aa24.96■■□□□ 1.59
CDR2-201ENST00000268383 DYNLL2Q96FJ2 89 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms