RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 TRIM66O15016 1216 aa18.7■□□□□ 0.58
ZNF541-201ENST00000263351 KRT9P35527 623 aa18.7■□□□□ 0.58
ZNF541-201ENST00000263351 SKIDA1Q1XH10 827 aa18.7■□□□□ 0.58
ZNF541-201ENST00000263351 TYW1BQ6NUM6 668 aa18.7■□□□□ 0.58
ZNF541-201ENST00000263351 INTS5Q6P9B9 1019 aaKnown RBP18.7■□□□□ 0.58
ZNF541-201ENST00000263351 CAPZA3Q96KX2 299 aa18.7■□□□□ 0.58
ZNF541-201ENST00000263351 CNTNAP5Q8WYK1 1306 aa18.7■□□□□ 0.58
ZNF541-201ENST00000263351 BCL9O00512 1426 aa18.7■□□□□ 0.58
ZNF541-201ENST00000263351 BCORQ6W2J9 1755 aa18.7■□□□□ 0.58
ZNF541-201ENST00000263351 MYO1BO43795 1136 aa18.7■□□□□ 0.58
ZNF541-201ENST00000263351 COPB1P53618 953 aaKnown RBP18.7■□□□□ 0.58
ZNF541-201ENST00000263351 CTR9Q6PD62 1173 aa18.7■□□□□ 0.58
ZNF541-201ENST00000263351 IRF2BP1Q8IU81 584 aa18.7■□□□□ 0.58
ZNF541-201ENST00000263351 FAN1Q9Y2M0 1017 aa18.7■□□□□ 0.58
ZNF541-201ENST00000263351 IGHMBP2P38935 993 aaKnown RBP18.69■□□□□ 0.58
ZNF541-201ENST00000263351 CATIPQ7Z7H3 387 aa18.69■□□□□ 0.58
ZNF541-201ENST00000263351 ELOA2Q8IYF1 753 aaPredicted RBP18.69■□□□□ 0.58
ZNF541-201ENST00000263351 TFCP2L1Q9NZI6 479 aa18.69■□□□□ 0.58
ZNF541-201ENST00000263351 KCNJ18B7U540 433 aa18.69■□□□□ 0.58
ZNF541-201ENST00000263351 GTF2E1P29083 439 aaPredicted RBP18.69■□□□□ 0.58
ZNF541-201ENST00000263351 NLRP5P59047 1200 aa18.69■□□□□ 0.58
ZNF541-201ENST00000263351 UBXN1Q04323 297 aa18.69■□□□□ 0.58
ZNF541-201ENST00000263351 KCNJ12Q14500 433 aa18.69■□□□□ 0.58
ZNF541-201ENST00000263351 KANK3Q6NY19 840 aa18.69■□□□□ 0.58
ZNF541-201ENST00000263351 SRCAPQ6ZRS2 3230 aa18.69■□□□□ 0.58
ZNF541-201ENST00000263351 STAG2Q8N3U4 1231 aa18.69■□□□□ 0.58
ZNF541-201ENST00000263351 BBXQ8WY36 941 aaPredicted RBP18.69■□□□□ 0.58
ZNF541-201ENST00000263351 DUSP10Q9Y6W6 482 aa18.69■□□□□ 0.58
ZNF541-201ENST00000263351 TTC26A0AVF1 554 aa18.68■□□□□ 0.58
ZNF541-201ENST00000263351 CTAGE9A4FU28 777 aa18.68■□□□□ 0.58
ZNF541-201ENST00000263351 LRRIQ3A6PVS8 624 aaPredicted RBP18.68■□□□□ 0.58
ZNF541-201ENST00000263351 MAP2K7O14733 419 aa18.68■□□□□ 0.58
ZNF541-201ENST00000263351 CRKLP46109 303 aaKnown RBP18.68■□□□□ 0.58
ZNF541-201ENST00000263351 TMTC3Q6ZXV5 915 aa18.68■□□□□ 0.58
ZNF541-201ENST00000263351 RIN2Q8WYP3 895 aaPredicted RBP18.68■□□□□ 0.58
ZNF541-201ENST00000263351 HPS3Q969F9 1004 aa18.68■□□□□ 0.58
ZNF541-201ENST00000263351 NHSL1Q5SYE7 1610 aa18.68■□□□□ 0.58
ZNF541-201ENST00000263351 PRPF3O43395 683 aaKnown RBP18.68■□□□□ 0.58
ZNF541-201ENST00000263351 ATP2C1P98194 919 aaPredicted RBP18.68■□□□□ 0.58
ZNF541-201ENST00000263351 ITPK1Q13572 414 aa18.68■□□□□ 0.58
ZNF541-201ENST00000263351 GSDMAQ96QA5 445 aa18.68■□□□□ 0.58
ZNF541-201ENST00000263351 TMEM60Q9H2L4 133 aa18.68■□□□□ 0.58
ZNF541-201ENST00000263351 RNF41Q9H4P4 317 aaPredicted RBP18.68■□□□□ 0.58
ZNF541-201ENST00000263351 CALCOCO1Q9P1Z2 691 aa18.68■□□□□ 0.58
ZNF541-201ENST00000263351 ANKRD36CQ5JPF3 1778 aa18.67■□□□□ 0.58
ZNF541-201ENST00000263351 ZNF335Q9H4Z2 1342 aaPredicted RBP18.67■□□□□ 0.58
ZNF541-201ENST00000263351 CCDC151A5D8V7 595 aa18.67■□□□□ 0.58
ZNF541-201ENST00000263351 RCCD1A6NED2 376 aa18.67■□□□□ 0.58
ZNF541-201ENST00000263351 TPM1P09493 284 aa18.67■□□□□ 0.58
ZNF541-201ENST00000263351 GNAT2P19087 354 aa18.67■□□□□ 0.58
ZNF541-201ENST00000263351 EIF5P55010 431 aaKnown RBP18.67■□□□□ 0.58
ZNF541-201ENST00000263351 TCP11X2Q5H9J9 407 aa18.67■□□□□ 0.58
ZNF541-201ENST00000263351 JAKMIP3Q5VZ66 844 aa18.67■□□□□ 0.58
ZNF541-201ENST00000263351 ZNF185O15231 689 aa18.67■□□□□ 0.58
ZNF541-201ENST00000263351 PRDX5P30044 214 aa18.67■□□□□ 0.58
ZNF541-201ENST00000263351 ATP6V1AP38606 617 aa18.67■□□□□ 0.58
ZNF541-201ENST00000263351 IL6STP40189 918 aaPredicted RBP18.67■□□□□ 0.58
ZNF541-201ENST00000263351 ZSCAN26Q16670 478 aa18.67■□□□□ 0.58
ZNF541-201ENST00000263351 FILIP1LQ4L180 1135 aa18.67■□□□□ 0.58
ZNF541-201ENST00000263351 NTSR2O95665 410 aa18.66■□□□□ 0.58
ZNF541-201ENST00000263351 ATP1A1P05023 1023 aaKnown RBP18.66■□□□□ 0.58
ZNF541-201ENST00000263351 PAK1Q13153 545 aa18.66■□□□□ 0.58
ZNF541-201ENST00000263351 TMTC2Q8N394 836 aa18.66■□□□□ 0.58
ZNF541-201ENST00000263351 AGPAT5Q9NUQ2 364 aa18.66■□□□□ 0.58
ZNF541-201ENST00000263351 DCCP43146 1447 aa18.66■□□□□ 0.58
ZNF541-201ENST00000263351 LRP5O75197 1615 aa18.66■□□□□ 0.58
ZNF541-201ENST00000263351 KCTD19Q17RG1 926 aaPredicted RBP18.66■□□□□ 0.58
ZNF541-201ENST00000263351 CELF1Q92879 486 aaKnown RBP18.66■□□□□ 0.58
ZNF541-201ENST00000263351 NAPGQ99747 312 aaPredicted RBP18.66■□□□□ 0.58
ZNF541-201ENST00000263351 XIRP1Q702N8 1843 aaKnown RBP18.65■□□□□ 0.58
ZNF541-201ENST00000263351 CAMTA2O94983 1202 aa18.65■□□□□ 0.58
ZNF541-201ENST00000263351 RPN1P04843 607 aaKnown RBP18.65■□□□□ 0.58
ZNF541-201ENST00000263351 SLC35G1Q2M3R5 365 aa18.65■□□□□ 0.58
ZNF541-201ENST00000263351 ERFEQ4G0M1 354 aa18.65■□□□□ 0.58
ZNF541-201ENST00000263351 CCDC152Q4G0S7 254 aa18.65■□□□□ 0.58
ZNF541-201ENST00000263351 NAALADL2Q58DX5 795 aa18.65■□□□□ 0.58
ZNF541-201ENST00000263351 TAF3Q5VWG9 929 aa18.65■□□□□ 0.58
ZNF541-201ENST00000263351 DYNLL2Q96FJ2 89 aa18.65■□□□□ 0.58
ZNF541-201ENST00000263351 MMS19Q96T76 1030 aa18.65■□□□□ 0.58
ZNF541-201ENST00000263351 L1RE1Q9UN81 338 aa18.65■□□□□ 0.58
ZNF541-201ENST00000263351 RTL9Q8NET4 1388 aa18.65■□□□□ 0.58
ZNF541-201ENST00000263351 XBP1P17861 261 aa18.65■□□□□ 0.58
ZNF541-201ENST00000263351 CYP27A1Q02318 531 aa18.65■□□□□ 0.58
ZNF541-201ENST00000263351 FKBP15Q5T1M5 1219 aa18.65■□□□□ 0.58
ZNF541-201ENST00000263351 CNGA4Q8IV77 575 aa18.65■□□□□ 0.58
ZNF541-201ENST00000263351 SMCR8Q8TEV9 937 aaPredicted RBP18.65■□□□□ 0.58
ZNF541-201ENST00000263351 CCDC102AQ96A19 550 aa18.65■□□□□ 0.58
ZNF541-201ENST00000263351 DUOX1Q9NRD9 1551 aa18.65■□□□□ 0.58
ZNF541-201ENST00000263351 ERVV-1B6SEH8 477 aa18.64■□□□□ 0.57
ZNF541-201ENST00000263351 USP17L8P0C7I0 530 aa18.64■□□□□ 0.57
ZNF541-201ENST00000263351 HERVK_113P62684 666 aa18.64■□□□□ 0.57
ZNF541-201ENST00000263351 WDR59Q6PJI9 974 aa18.64■□□□□ 0.57
ZNF541-201ENST00000263351 LACRTQ9GZZ8 138 aa18.64■□□□□ 0.57
ZNF541-201ENST00000263351 PARP1P09874 1014 aaKnown RBP18.64■□□□□ 0.57
ZNF541-201ENST00000263351 AMPD2Q01433 879 aa18.64■□□□□ 0.57
ZNF541-201ENST00000263351 CASP8Q14790 479 aa18.64■□□□□ 0.57
ZNF541-201ENST00000263351 TXNRD3Q86VQ6 643 aa18.64■□□□□ 0.57
ZNF541-201ENST00000263351 IQCA1Q86XH1 822 aa18.64■□□□□ 0.57
ZNF541-201ENST00000263351 IQUBQ8NA54 791 aa18.64■□□□□ 0.57
ZNF541-201ENST00000263351 RASSF8Q8NHQ8 419 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms