RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 FKBP15Q5T1M5 1219 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 ZNF530Q6P9A1 599 aaPredicted RBP8.08□□□□□ -1.12
CSDE1-201ENST00000261443 MICU3Q86XE3 530 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 ZNF579Q8NAF0 562 aaKnown RBP8.08□□□□□ -1.12
CSDE1-201ENST00000261443 MYCBPAPQ8TBZ2 947 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 RUBCNQ92622 972 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 CSRNP2Q9H175 543 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 ACTR5Q9H9F9 607 aaPredicted RBP8.08□□□□□ -1.12
CSDE1-201ENST00000261443 ANGEL1Q9UNK9 670 aaKnown RBP8.08□□□□□ -1.12
CSDE1-201ENST00000261443 WDR17Q8IZU2 1322 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 E7EVH7 732 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 MAP2K1Q02750 393 aaPredicted RBP8.08□□□□□ -1.12
CSDE1-201ENST00000261443 TTF1Q15361 905 aaPredicted RBP8.08□□□□□ -1.12
CSDE1-201ENST00000261443 C11orf91Q3C1V1 193 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 TICAM2Q86XR7 235 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 GGA2Q9UJY4 613 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 LUC7L2Q9Y383 392 aaKnown RBP8.08□□□□□ -1.12
CSDE1-201ENST00000261443 CPDO75976 1380 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 TTC26A0AVF1 554 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 MACROD2A1Z1Q3 448 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 LRRC10BA6NIK2 292 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 UBE2Q2LH0YL09 131 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 IPO7O95373 1038 aaKnown RBP8.08□□□□□ -1.12
CSDE1-201ENST00000261443 FAM107AO95990 144 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 RPSAP08865 295 aaKnown RBP8.08□□□□□ -1.12
CSDE1-201ENST00000261443 MYL6BP14649 208 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 NR1D1P20393 614 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 APBA1Q02410 837 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 SPAG1Q07617 926 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 ZKSCAN8Q15776 578 aaPredicted RBP8.08□□□□□ -1.12
CSDE1-201ENST00000261443 AKAP4Q5JQC9 854 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 CFAP58Q5T655 872 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 KIRREL3Q8IZU9 778 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 FUKQ8N0W3 1084 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 GSDMAQ96QA5 445 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 SLC26A6Q9BXS9 759 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 PCDHB6Q9Y5E3 794 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 SRPRBQ9Y5M8 271 aaKnown RBP8.08□□□□□ -1.12
CSDE1-201ENST00000261443 PES1O00541 588 aaKnown RBP8.07□□□□□ -1.12
CSDE1-201ENST00000261443 FOXP2O15409 715 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 RTN2O75298 545 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 SLC8A1P32418 973 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 FKBP4Q02790 459 aaKnown RBP eCLIP8.07□□□□□ -1.12
CSDE1-201ENST00000261443 PPARAQ07869 468 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 RILPL1Q5EBL4 403 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 APOA5Q6Q788 366 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 NFXL1Q6ZNB6 911 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 FAM228AQ86W67 206 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 DIS3L2Q8IYB7 885 aaKnown RBP8.07□□□□□ -1.12
CSDE1-201ENST00000261443 MAGEC3Q8TD91 643 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 CAVIN3Q969G5 261 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 PAGE5Q96GU1 130 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 LACRTQ9GZZ8 138 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 ATP6V0A4Q9HBG4 840 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 TPX2Q9ULW0 747 aaKnown RBP8.07□□□□□ -1.12
CSDE1-201ENST00000261443 CEP131Q9UPN4 1083 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 UBN2Q6ZU65 1347 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 WDR19Q8NEZ3 1342 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 NWD2Q9ULI1 1742 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 KCNJ18B7U540 433 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 ZBTB43O43298 467 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 RANBP6O60518 1105 aaKnown RBP8.07□□□□□ -1.12
CSDE1-201ENST00000261443 MDH1P40925 334 aaKnown RBP8.07□□□□□ -1.12
CSDE1-201ENST00000261443 SSRP1Q08945 709 aaKnown RBP8.07□□□□□ -1.12
CSDE1-201ENST00000261443 KCNJ12Q14500 433 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 TCP11X2Q5H9J9 407 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 CREG2Q8IUH2 290 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 FNBP4Q8N3X1 1017 aaPredicted RBP8.07□□□□□ -1.12
CSDE1-201ENST00000261443 SPATA4Q8NEY3 305 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 CCDC43Q96MW1 224 aaKnown RBP8.07□□□□□ -1.12
CSDE1-201ENST00000261443 HAUS2Q9NVX0 235 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 STIM2Q9P246 746 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 DUSP10Q9Y6W6 482 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 A0A087X0B3 334 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 RCCD1A6NED2 376 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 GOLGA8AA7E2F4 631 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 PPP1R12BO60237 982 aaPredicted RBP8.07□□□□□ -1.12
CSDE1-201ENST00000261443 SLIT3O75094 1523 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 SKAP2O75563 359 aaPredicted RBP8.07□□□□□ -1.12
CSDE1-201ENST00000261443 CYLC1P35663 651 aaPredicted RBP8.07□□□□□ -1.12
CSDE1-201ENST00000261443 PIP4K2AP48426 406 aaPredicted RBP8.07□□□□□ -1.12
CSDE1-201ENST00000261443 CCNHP51946 323 aaPredicted RBP8.07□□□□□ -1.12
CSDE1-201ENST00000261443 MST1RQ04912 1400 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 TBC1D8BQ0IIM8 1120 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 DPYDQ12882 1025 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 RRAGBQ5VZM2 374 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 TLDC1Q6P9B6 456 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 C6orf89Q6UWU4 347 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 ZNF662Q6ZS27 426 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 METTL22Q9BUU2 404 aaPredicted RBP8.07□□□□□ -1.12
CSDE1-201ENST00000261443 PPANQ9NQ55 473 aaKnown RBP8.07□□□□□ -1.12
CSDE1-201ENST00000261443 SNX12Q9UMY4 172 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 KCNJ14Q9UNX9 436 aa8.07□□□□□ -1.12
CSDE1-201ENST00000261443 C5P01031 1676 aa8.06□□□□□ -1.12
CSDE1-201ENST00000261443 RNMTO43148 476 aaKnown RBP8.06□□□□□ -1.12
CSDE1-201ENST00000261443 MMP1P03956 469 aa8.06□□□□□ -1.12
CSDE1-201ENST00000261443 GCKP35557 465 aa8.06□□□□□ -1.12
CSDE1-201ENST00000261443 VAV2P52735 878 aa8.06□□□□□ -1.12
CSDE1-201ENST00000261443 PDIA6Q15084 440 aa8.06□□□□□ -1.12
CSDE1-201ENST00000261443 NBPF20Q3BBV1 942 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms