RNA–Protein interactions for RNA: ENST00000256367.2

TTC9-201, Transcript of tetratricopeptide repeat domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC9, Length 5,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9-201ENST00000256367 SLFN12Q8IYM2 578 aa24.42■■□□□ 1.5
TTC9-201ENST00000256367 NSUN7Q8NE18 718 aaKnown RBP24.42■■□□□ 1.5
TTC9-201ENST00000256367 CCDC26Q8TAB7 109 aa24.42■■□□□ 1.5
TTC9-201ENST00000256367 SRP68Q9UHB9 627 aaKnown RBP24.42■■□□□ 1.5
TTC9-201ENST00000256367 PTGDRQ13258 359 aa24.42■■□□□ 1.5
TTC9-201ENST00000256367 TESPA1A2RU30 521 aaPredicted RBP24.41■■□□□ 1.5
TTC9-201ENST00000256367 DNM2P50570 870 aa24.41■■□□□ 1.5
TTC9-201ENST00000256367 GNPTABQ3T906 1256 aa24.41■■□□□ 1.5
TTC9-201ENST00000256367 CCDC25Q86WR0 208 aa24.41■■□□□ 1.5
TTC9-201ENST00000256367 PI4K2BQ8TCG2 481 aa24.41■■□□□ 1.5
TTC9-201ENST00000256367 SWAP70Q9UH65 585 aa24.41■■□□□ 1.5
TTC9-201ENST00000256367 KLHL30Q0D2K2 578 aa24.41■■□□□ 1.5
TTC9-201ENST00000256367 LIN9Q5TKA1 542 aa24.41■■□□□ 1.5
TTC9-201ENST00000256367 SMCR8Q8TEV9 937 aaPredicted RBP24.41■■□□□ 1.5
TTC9-201ENST00000256367 DDX25Q9UHL0 483 aaKnown RBP24.41■■□□□ 1.5
TTC9-201ENST00000256367 RTEL1Q9NZ71 1219 aa24.41■■□□□ 1.5
TTC9-201ENST00000256367 SPHKAPQ2M3C7 1700 aa24.41■■□□□ 1.5
TTC9-201ENST00000256367 NDUFA8P51970 172 aa24.4■■□□□ 1.5
TTC9-201ENST00000256367 OTUD6AQ7L8S5 288 aa24.4■■□□□ 1.5
TTC9-201ENST00000256367 MYOCDQ8IZQ8 938 aa24.4■■□□□ 1.5
TTC9-201ENST00000256367 C17orf53Q8N3J3 647 aaPredicted RBP24.4■■□□□ 1.5
TTC9-201ENST00000256367 TRIML1Q8N9V2 468 aa24.4■■□□□ 1.5
TTC9-201ENST00000256367 PCDHA1Q9Y5I3 950 aa24.4■■□□□ 1.5
TTC9-201ENST00000256367 GNA14O95837 355 aa24.4■■□□□ 1.5
TTC9-201ENST00000256367 ARHGEF16Q5VV41 709 aa24.4■■□□□ 1.5
TTC9-201ENST00000256367 TTC16Q8NEE8 873 aa24.4■■□□□ 1.5
TTC9-201ENST00000256367 NSRP1Q9H0G5 558 aaKnown RBP24.4■■□□□ 1.5
TTC9-201ENST00000256367 FAM207AQ9NSI2 230 aaPredicted RBP24.4■■□□□ 1.5
TTC9-201ENST00000256367 KCNG1Q9UIX4 513 aa24.4■■□□□ 1.5
TTC9-201ENST00000256367 CD2BP2O95400 341 aaKnown RBP24.4■■□□□ 1.5
TTC9-201ENST00000256367 FMNL1O95466 1100 aaPredicted RBP24.4■■□□□ 1.5
TTC9-201ENST00000256367 GPT2Q8TD30 523 aa24.4■■□□□ 1.5
TTC9-201ENST00000256367 SREK1Q8WXA9 508 aaKnown RBP24.4■■□□□ 1.5
TTC9-201ENST00000256367 ATRIPQ8WXE1 791 aa24.4■■□□□ 1.5
TTC9-201ENST00000256367 MAK16Q9BXY0 300 aaKnown RBP24.4■■□□□ 1.5
TTC9-201ENST00000256367 CARMIL3Q8ND23 1372 aa24.4■■□□□ 1.5
TTC9-201ENST00000256367 IGKV5-2P06315 115 aa24.39■■□□□ 1.5
TTC9-201ENST00000256367 CHAMP1Q96JM3 812 aa24.39■■□□□ 1.5
TTC9-201ENST00000256367 SLC8A3P57103 927 aa24.39■■□□□ 1.5
TTC9-201ENST00000256367 SFMBT2Q5VUG0 894 aa24.39■■□□□ 1.5
TTC9-201ENST00000256367 GPIHBP1Q8IV16 184 aa24.39■■□□□ 1.5
TTC9-201ENST00000256367 PABPN1LA6NDY0 278 aaKnown RBP24.39■■□□□ 1.49
TTC9-201ENST00000256367 BCRP11274 1271 aa24.39■■□□□ 1.49
TTC9-201ENST00000256367 RXRBP28702 533 aa24.39■■□□□ 1.49
TTC9-201ENST00000256367 HLFQ16534 295 aa24.39■■□□□ 1.49
TTC9-201ENST00000256367 EAPPQ56P03 285 aaPredicted RBP24.39■■□□□ 1.49
TTC9-201ENST00000256367 CLEC4GQ6UXB4 293 aa24.39■■□□□ 1.49
TTC9-201ENST00000256367 FOXP1Q9H334 677 aaPredicted RBP24.39■■□□□ 1.49
TTC9-201ENST00000256367 GTPBP6O43824 516 aaPredicted RBP24.39■■□□□ 1.49
TTC9-201ENST00000256367 GPATCH4Q5T3I0 446 aaKnown RBP24.39■■□□□ 1.49
TTC9-201ENST00000256367 SLF1Q9BQI6 1058 aa24.39■■□□□ 1.49
TTC9-201ENST00000256367 TLDC2A0PJX2 215 aa24.38■■□□□ 1.49
TTC9-201ENST00000256367 LONP1P36776 959 aaKnown RBP24.38■■□□□ 1.49
TTC9-201ENST00000256367 RASGRF1Q13972 1273 aa24.38■■□□□ 1.49
TTC9-201ENST00000256367 TRERF1Q96PN7 1200 aa24.38■■□□□ 1.49
TTC9-201ENST00000256367 PCDHB13Q9Y5F0 798 aa24.38■■□□□ 1.49
TTC9-201ENST00000256367 A0A1W2PQ27 194 aa24.38■■□□□ 1.49
TTC9-201ENST00000256367 A0A1W2PQ64 194 aa24.38■■□□□ 1.49
TTC9-201ENST00000256367 A0A1W2PQD8 194 aa24.38■■□□□ 1.49
TTC9-201ENST00000256367 ZNF827Q17R98 1081 aa24.38■■□□□ 1.49
TTC9-201ENST00000256367 LONRF3Q496Y0 759 aa24.38■■□□□ 1.49
TTC9-201ENST00000256367 SEPT12Q8IYM1 358 aa24.38■■□□□ 1.49
TTC9-201ENST00000256367 IQCDQ96DY2 449 aa24.38■■□□□ 1.49
TTC9-201ENST00000256367 TRIM6Q9C030 488 aaPredicted RBP24.38■■□□□ 1.49
TTC9-201ENST00000256367 NUCKS1Q9H1E3 243 aaKnown RBP24.38■■□□□ 1.49
TTC9-201ENST00000256367 KCNJ18B7U540 433 aa24.38■■□□□ 1.49
TTC9-201ENST00000256367 FLOT1O75955 427 aa24.38■■□□□ 1.49
TTC9-201ENST00000256367 KCNJ12Q14500 433 aa24.38■■□□□ 1.49
TTC9-201ENST00000256367 MCF2L2Q86YR7 1114 aa24.38■■□□□ 1.49
TTC9-201ENST00000256367 SYMPKQ92797 1274 aaKnown RBP24.38■■□□□ 1.49
TTC9-201ENST00000256367 PSMD1Q99460 953 aa24.38■■□□□ 1.49
TTC9-201ENST00000256367 DBNDD1Q9H9R9 158 aa24.38■■□□□ 1.49
TTC9-201ENST00000256367 BSDC1Q9NW68 430 aaPredicted RBP24.38■■□□□ 1.49
TTC9-201ENST00000256367 CUL4AQ13619 759 aa24.38■■□□□ 1.49
TTC9-201ENST00000256367 ASPRV1Q53RT3 343 aa24.38■■□□□ 1.49
TTC9-201ENST00000256367 CFAP58Q5T655 872 aa24.38■■□□□ 1.49
TTC9-201ENST00000256367 GLG1Q92896 1179 aa24.38■■□□□ 1.49
TTC9-201ENST00000256367 IWS1Q96ST2 819 aa24.38■■□□□ 1.49
TTC9-201ENST00000256367 PAGR1Q9BTK6 254 aa24.38■■□□□ 1.49
TTC9-201ENST00000256367 PIH1D3Q9NQM4 214 aaKnown RBP24.38■■□□□ 1.49
TTC9-201ENST00000256367 MORC3Q14149 939 aa24.38■■□□□ 1.49
TTC9-201ENST00000256367 SLC39A14Q15043 492 aa24.38■■□□□ 1.49
TTC9-201ENST00000256367 SMIM23A6NLE4 172 aa24.37■■□□□ 1.49
TTC9-201ENST00000256367 RBM6P78332 1123 aaKnown RBP24.37■■□□□ 1.49
TTC9-201ENST00000256367 CTTNBP2NLQ9P2B4 639 aa24.37■■□□□ 1.49
TTC9-201ENST00000256367 RRAGAQ7L523 313 aa24.37■■□□□ 1.49
TTC9-201ENST00000256367 CSRNP1Q96S65 589 aa24.37■■□□□ 1.49
TTC9-201ENST00000256367 SELENOSQ9BQE4 189 aa24.37■■□□□ 1.49
TTC9-201ENST00000256367 GRAPQ13588 217 aa24.37■■□□□ 1.49
TTC9-201ENST00000256367 EPHA10Q5JZY3 1008 aa24.37■■□□□ 1.49
TTC9-201ENST00000256367 GRAPLQ8TC17 118 aaPredicted RBP24.37■■□□□ 1.49
TTC9-201ENST00000256367 NLRC4Q9NPP4 1024 aa24.37■■□□□ 1.49
TTC9-201ENST00000256367 RNASE9P60153 205 aaKnown RBP24.37■■□□□ 1.49
TTC9-201ENST00000256367 C8orf74Q6P047 294 aa24.37■■□□□ 1.49
TTC9-201ENST00000256367 RDH13Q8NBN7 331 aa24.37■■□□□ 1.49
TTC9-201ENST00000256367 AMNQ9BXJ7 453 aa24.37■■□□□ 1.49
TTC9-201ENST00000256367 PNMA2Q9UL42 364 aa24.37■■□□□ 1.49
TTC9-201ENST00000256367 FOSP01100 380 aaPredicted RBP24.36■■□□□ 1.49
TTC9-201ENST00000256367 ARHGAP27Q6ZUM4 889 aa24.36■■□□□ 1.49
TTC9-201ENST00000256367 HDXQ7Z353 690 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms