RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 CCDC24Q8N4L8 307 aa12.77□□□□□ -0.36
PDE6B-201ENST00000255622 CACNA1SQ13698 1873 aa12.77□□□□□ -0.37
PDE6B-201ENST00000255622 KIF2AO00139 706 aaPredicted RBP12.77□□□□□ -0.37
PDE6B-201ENST00000255622 ADAMTS3O15072 1205 aa12.77□□□□□ -0.37
PDE6B-201ENST00000255622 MAGEA9P43362 315 aa12.77□□□□□ -0.37
PDE6B-201ENST00000255622 CCDC93Q567U6 631 aa12.77□□□□□ -0.37
PDE6B-201ENST00000255622 IFIT1BQ5T764 474 aaKnown RBP12.77□□□□□ -0.37
PDE6B-201ENST00000255622 KLHL10Q6JEL2 608 aa12.77□□□□□ -0.37
PDE6B-201ENST00000255622 REXO1L1PQ8IX06 675 aa12.77□□□□□ -0.37
PDE6B-201ENST00000255622 STAMQ92783 540 aa12.77□□□□□ -0.37
PDE6B-201ENST00000255622 RMI1Q9H9A7 625 aa12.77□□□□□ -0.37
PDE6B-201ENST00000255622 ZNF804BA4D1E1 1349 aa12.77□□□□□ -0.37
PDE6B-201ENST00000255622 WNK3Q9BYP7 1800 aa12.77□□□□□ -0.37
PDE6B-201ENST00000255622 ZNF18P17022 549 aa12.77□□□□□ -0.37
PDE6B-201ENST00000255622 KCNJ6P48051 423 aa12.77□□□□□ -0.37
PDE6B-201ENST00000255622 STX17P56962 302 aa12.77□□□□□ -0.37
PDE6B-201ENST00000255622 ETF1P62495 437 aaKnown RBP12.77□□□□□ -0.37
PDE6B-201ENST00000255622 AKAP17AQ02040 695 aaKnown RBP12.77□□□□□ -0.37
PDE6B-201ENST00000255622 FUT2Q10981 343 aa12.77□□□□□ -0.37
PDE6B-201ENST00000255622 C11orf91Q3C1V1 193 aa12.77□□□□□ -0.37
PDE6B-201ENST00000255622 NT5DC1Q5TFE4 455 aa12.77□□□□□ -0.37
PDE6B-201ENST00000255622 TOGARAM2Q6ZUX3 1019 aa12.77□□□□□ -0.37
PDE6B-201ENST00000255622 TRIM74Q86UV6 250 aa12.77□□□□□ -0.37
PDE6B-201ENST00000255622 TRIM73Q86UV7 250 aa12.77□□□□□ -0.37
PDE6B-201ENST00000255622 CELF1Q92879 486 aaKnown RBP12.77□□□□□ -0.37
PDE6B-201ENST00000255622 HOOK1Q9UJC3 728 aaKnown RBP12.77□□□□□ -0.37
PDE6B-201ENST00000255622 DUOX1Q9NRD9 1551 aa12.76□□□□□ -0.37
PDE6B-201ENST00000255622 VEGFAP15692 232 aaPredicted RBP12.76□□□□□ -0.37
PDE6B-201ENST00000255622 ANKRD18AQ8IVF6 992 aa12.76□□□□□ -0.37
PDE6B-201ENST00000255622 ARL10Q8N8L6 244 aa12.76□□□□□ -0.37
PDE6B-201ENST00000255622 RNF26Q9BY78 433 aaPredicted RBP12.76□□□□□ -0.37
PDE6B-201ENST00000255622 CD44P16070 742 aaKnown RBP12.76□□□□□ -0.37
PDE6B-201ENST00000255622 ZNF174Q15697 407 aa12.76□□□□□ -0.37
PDE6B-201ENST00000255622 FAM47AQ5JRC9 791 aa12.76□□□□□ -0.37
PDE6B-201ENST00000255622 SYMPKQ92797 1274 aaKnown RBP12.76□□□□□ -0.37
PDE6B-201ENST00000255622 CDC5LQ99459 802 aaKnown RBP12.76□□□□□ -0.37
PDE6B-201ENST00000255622 PHF20Q9BVI0 1012 aa12.76□□□□□ -0.37
PDE6B-201ENST00000255622 ANAPC4Q9UJX5 808 aa12.76□□□□□ -0.37
PDE6B-201ENST00000255622 RTL9Q8NET4 1388 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 VWA3AA6NCI4 1184 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 TRIM75PA6NK02 468 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 USP17L12C9JPN9 530 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 USP17L21D6R901 530 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 CAPN15O75808 1086 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 AP1G2O75843 785 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 KRT2P35908 639 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 TBX2Q13207 712 aaPredicted RBP12.75□□□□□ -0.37
PDE6B-201ENST00000255622 SKIDA1Q1XH10 827 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 MMS22LQ6ZRQ5 1243 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 SLC51AQ86UW1 340 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 TC2NQ8N9U0 490 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 ZNF579Q8NAF0 562 aaKnown RBP12.75□□□□□ -0.37
PDE6B-201ENST00000255622 FAM84BQ96KN1 310 aaPredicted RBP12.75□□□□□ -0.37
PDE6B-201ENST00000255622 DESI2Q9BSY9 194 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 ETAA1Q9NY74 926 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 MINPP1Q9UNW1 487 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.75□□□□□ -0.37
PDE6B-201ENST00000255622 ABCD1P33897 745 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 LMAN1P49257 510 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 TROAPQ12815 778 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 CATIPQ7Z7H3 387 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 MLKLQ8NB16 471 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 BAG1Q99933 345 aaPredicted RBP12.75□□□□□ -0.37
PDE6B-201ENST00000255622 AATFQ9NY61 560 aaKnown RBP eCLIP12.75□□□□□ -0.37
PDE6B-201ENST00000255622 TFCP2L1Q9NZI6 479 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 PPP2R2CQ9Y2T4 447 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 SPATA31A1Q5TZJ5 1347 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 PES1O00541 588 aaKnown RBP12.75□□□□□ -0.37
PDE6B-201ENST00000255622 TEX33O43247 280 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 CYP2D6P10635 497 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 MTF1Q14872 753 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 SPECC1LQ69YQ0 1117 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 ENOX1Q8TC92 643 aaKnown RBP12.75□□□□□ -0.37
PDE6B-201ENST00000255622 CEP131Q9UPN4 1083 aa12.75□□□□□ -0.37
PDE6B-201ENST00000255622 GOLGA6CA6NDK9 693 aa12.74□□□□□ -0.37
PDE6B-201ENST00000255622 GOLGA6BA6NDN3 693 aa12.74□□□□□ -0.37
PDE6B-201ENST00000255622 URI1O94763 535 aaPredicted RBP12.74□□□□□ -0.37
PDE6B-201ENST00000255622 GOLGA6DP0CG33 693 aa12.74□□□□□ -0.37
PDE6B-201ENST00000255622 NPY5RQ15761 445 aa12.74□□□□□ -0.37
PDE6B-201ENST00000255622 KLHL23Q8NBE8 558 aa12.74□□□□□ -0.37
PDE6B-201ENST00000255622 GOLGA6AQ9NYA3 693 aa12.74□□□□□ -0.37
PDE6B-201ENST00000255622 LAMB2P55268 1798 aa12.74□□□□□ -0.37
PDE6B-201ENST00000255622 MYH13Q9UKX3 1938 aa12.74□□□□□ -0.37
PDE6B-201ENST00000255622 KDM4FA0A1W2PPD8 638 aa12.74□□□□□ -0.37
PDE6B-201ENST00000255622 COQ9O75208 318 aa12.74□□□□□ -0.37
PDE6B-201ENST00000255622 CAVIN4Q5BKX8 364 aa12.74□□□□□ -0.37
PDE6B-201ENST00000255622 SPATA20Q8TB22 786 aa12.74□□□□□ -0.37
PDE6B-201ENST00000255622 TBC1D22AQ8WUA7 517 aa12.74□□□□□ -0.37
PDE6B-201ENST00000255622 PAGE5Q96GU1 130 aa12.74□□□□□ -0.37
PDE6B-201ENST00000255622 WDR24Q96S15 920 aa12.74□□□□□ -0.37
PDE6B-201ENST00000255622 EPC1Q9H2F5 836 aa12.74□□□□□ -0.37
PDE6B-201ENST00000255622 ZCCHC17Q9NP64 241 aaKnown RBP12.74□□□□□ -0.37
PDE6B-201ENST00000255622 GNL3LQ9NVN8 582 aaKnown RBP12.74□□□□□ -0.37
PDE6B-201ENST00000255622 A0A1B0GUL6 1792 aa12.74□□□□□ -0.37
PDE6B-201ENST00000255622 PLCD1P51178 756 aa12.73□□□□□ -0.37
PDE6B-201ENST00000255622 ELOA2Q8IYF1 753 aaPredicted RBP12.73□□□□□ -0.37
PDE6B-201ENST00000255622 SRBD1Q8N5C6 995 aaKnown RBP12.73□□□□□ -0.37
PDE6B-201ENST00000255622 LINC00116Q8NCU8 138 aa12.73□□□□□ -0.37
PDE6B-201ENST00000255622 PPM1EQ8WY54 764 aa12.73□□□□□ -0.37
PDE6B-201ENST00000255622 ROBO1Q9Y6N7 1651 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms