RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 IGSF3O75054 1194 aa16.83■□□□□ 0.28
MBD4-201ENST00000249910 DNTTIP2Q5QJE6 756 aaKnown RBP16.83■□□□□ 0.28
MBD4-201ENST00000249910 SARM1Q6SZW1 724 aa16.83■□□□□ 0.28
MBD4-201ENST00000249910 ZFPM1Q8IX07 1006 aa16.83■□□□□ 0.28
MBD4-201ENST00000249910 LAMB1P07942 1786 aa16.83■□□□□ 0.28
MBD4-201ENST00000249910 AFMP43652 599 aa16.82■□□□□ 0.28
MBD4-201ENST00000249910 POSTNQ15063 836 aa16.82■□□□□ 0.28
MBD4-201ENST00000249910 APOBEC3HQ6NTF7 200 aaKnown RBP16.82■□□□□ 0.28
MBD4-201ENST00000249910 CERS3Q8IU89 383 aa16.82■□□□□ 0.28
MBD4-201ENST00000249910 FLAD1Q8NFF5 587 aa16.82■□□□□ 0.28
MBD4-201ENST00000249910 CACTINQ8WUQ7 758 aaKnown RBP16.82■□□□□ 0.28
MBD4-201ENST00000249910 STAMQ92783 540 aa16.82■□□□□ 0.28
MBD4-201ENST00000249910 AKR1B1P15121 316 aa16.82■□□□□ 0.28
MBD4-201ENST00000249910 TCP10Q12799 353 aa16.82■□□□□ 0.28
MBD4-201ENST00000249910 CDC42EP5Q6NZY7 148 aa16.82■□□□□ 0.28
MBD4-201ENST00000249910 BLIDQ8IZY5 108 aa16.82■□□□□ 0.28
MBD4-201ENST00000249910 LRRC47Q8N1G4 583 aaKnown RBP16.82■□□□□ 0.28
MBD4-201ENST00000249910 ZNF579Q8NAF0 562 aaKnown RBP16.82■□□□□ 0.28
MBD4-201ENST00000249910 KIAA1524Q8TCG1 905 aa16.82■□□□□ 0.28
MBD4-201ENST00000249910 HSD3B7Q9H2F3 369 aa16.82■□□□□ 0.28
MBD4-201ENST00000249910 USP17L5A8MUK1 530 aa16.81■□□□□ 0.28
MBD4-201ENST00000249910 IL17AQ16552 155 aa16.81■□□□□ 0.28
MBD4-201ENST00000249910 PTPN21Q16825 1174 aa16.81■□□□□ 0.28
MBD4-201ENST00000249910 FRMPD2Q68DX3 1309 aaPredicted RBP16.81■□□□□ 0.28
MBD4-201ENST00000249910 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.81■□□□□ 0.28
MBD4-201ENST00000249910 FAM196BA6NMK8 535 aa16.81■□□□□ 0.28
MBD4-201ENST00000249910 H0YIN7 160 aa16.81■□□□□ 0.28
MBD4-201ENST00000249910 ACTN4O43707 911 aaKnown RBP16.81■□□□□ 0.28
MBD4-201ENST00000249910 SMC2O95347 1197 aa16.81■□□□□ 0.28
MBD4-201ENST00000249910 MRFAP1L1Q96HT8 127 aa16.81■□□□□ 0.28
MBD4-201ENST00000249910 IFNKQ9P0W0 207 aa16.81■□□□□ 0.28
MBD4-201ENST00000249910 PARP1P09874 1014 aaKnown RBP16.8■□□□□ 0.28
MBD4-201ENST00000249910 RBM5P52756 815 aaKnown RBP eCLIP16.8■□□□□ 0.28
MBD4-201ENST00000249910 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.8■□□□□ 0.28
MBD4-201ENST00000249910 XPO4Q9C0E2 1151 aaKnown RBP16.8■□□□□ 0.28
MBD4-201ENST00000249910 PCDHA4Q9UN74 947 aa16.8■□□□□ 0.28
MBD4-201ENST00000249910 GNAQP50148 359 aa16.8■□□□□ 0.28
MBD4-201ENST00000249910 GABPAQ06546 454 aa16.8■□□□□ 0.28
MBD4-201ENST00000249910 INF2Q27J81 1249 aa16.8■□□□□ 0.28
MBD4-201ENST00000249910 TEKT1Q969V4 418 aa16.8■□□□□ 0.28
MBD4-201ENST00000249910 SERPINB13Q9UIV8 391 aa16.8■□□□□ 0.28
MBD4-201ENST00000249910 LTBP1Q14766 1721 aa16.8■□□□□ 0.28
MBD4-201ENST00000249910 ATP2C1P98194 919 aaPredicted RBP16.79■□□□□ 0.28
MBD4-201ENST00000249910 SHROOM1Q2M3G4 852 aaPredicted RBP16.79■□□□□ 0.28
MBD4-201ENST00000249910 CCDC178Q5BJE1 867 aa16.79■□□□□ 0.28
MBD4-201ENST00000249910 BPIFA3Q9BQP9 254 aa16.79■□□□□ 0.28
MBD4-201ENST00000249910 BARHL2Q9NY43 387 aa16.79■□□□□ 0.28
MBD4-201ENST00000249910 RGS17Q9UGC6 210 aaPredicted RBP16.79■□□□□ 0.28
MBD4-201ENST00000249910 MAN1B1Q9UKM7 699 aa16.79■□□□□ 0.28
MBD4-201ENST00000249910 DLEC1Q9Y238 1755 aa16.79■□□□□ 0.28
MBD4-201ENST00000249910 ATP2B2Q01814 1243 aa16.79■□□□□ 0.28
MBD4-201ENST00000249910 PIGSQ96S52 555 aa16.79■□□□□ 0.28
MBD4-201ENST00000249910 MTMR4Q9NYA4 1195 aa16.79■□□□□ 0.28
MBD4-201ENST00000249910 PCDHA6Q9UN73 950 aa16.79■□□□□ 0.28
MBD4-201ENST00000249910 PCDHA8Q9Y5H6 950 aa16.79■□□□□ 0.28
MBD4-201ENST00000249910 STXBP3O00186 592 aa16.78■□□□□ 0.28
MBD4-201ENST00000249910 TOP1P11387 765 aaKnown RBP16.78■□□□□ 0.28
MBD4-201ENST00000249910 CALML3P27482 149 aa16.78■□□□□ 0.28
MBD4-201ENST00000249910 CRKP46108 304 aa16.78■□□□□ 0.28
MBD4-201ENST00000249910 SLC15A2Q16348 729 aa16.78■□□□□ 0.28
MBD4-201ENST00000249910 AOC3Q16853 763 aa16.78■□□□□ 0.28
MBD4-201ENST00000249910 POTEAQ6S8J7 498 aa16.78■□□□□ 0.28
MBD4-201ENST00000249910 PODNQ7Z5L7 613 aa16.78■□□□□ 0.28
MBD4-201ENST00000249910 FANCLQ9NW38 375 aa16.78■□□□□ 0.28
MBD4-201ENST00000249910 NAV1Q8NEY1 1877 aa16.78■□□□□ 0.28
MBD4-201ENST00000249910 CCDC194A0A1B0GVG4 234 aa16.78■□□□□ 0.28
MBD4-201ENST00000249910 MPHOSPH10O00566 681 aaKnown RBP16.78■□□□□ 0.28
MBD4-201ENST00000249910 HMGB2P26583 209 aaKnown RBP16.78■□□□□ 0.28
MBD4-201ENST00000249910 TRMT44Q8IYL2 757 aaKnown RBP16.78■□□□□ 0.28
MBD4-201ENST00000249910 SMARCE1Q969G3 411 aa16.78■□□□□ 0.28
MBD4-201ENST00000249910 FERMT2Q96AC1 680 aa16.78■□□□□ 0.28
MBD4-201ENST00000249910 OSBPL5Q9H0X9 879 aaPredicted RBP16.78■□□□□ 0.28
MBD4-201ENST00000249910 SUGT1Q9Y2Z0 365 aa16.78■□□□□ 0.28
MBD4-201ENST00000249910 DDX60LQ5H9U9 1706 aaKnown RBP16.78■□□□□ 0.28
MBD4-201ENST00000249910 M0R2N6 131 aa16.77■□□□□ 0.28
MBD4-201ENST00000249910 ECE2O60344 883 aa16.77■□□□□ 0.28
MBD4-201ENST00000249910 TPM3P06753 285 aa16.77■□□□□ 0.28
MBD4-201ENST00000249910 PDHBP11177 359 aa16.77■□□□□ 0.28
MBD4-201ENST00000249910 NAPAP54920 295 aa16.77■□□□□ 0.28
MBD4-201ENST00000249910 FMR1Q06787 632 aaKnown RBP eCLIP16.77■□□□□ 0.28
MBD4-201ENST00000249910 LRRC8AQ8IWT6 810 aa16.77■□□□□ 0.28
MBD4-201ENST00000249910 CDK5RAP2Q96SN8 1893 aa16.77■□□□□ 0.27
MBD4-201ENST00000249910 LRRC37AA6NMS7 1700 aa16.77■□□□□ 0.27
MBD4-201ENST00000249910 RAD21O60216 631 aa16.77■□□□□ 0.27
MBD4-201ENST00000249910 SARSP49591 514 aaKnown RBP16.77■□□□□ 0.27
MBD4-201ENST00000249910 SMYD4Q8IYR2 804 aaPredicted RBP16.77■□□□□ 0.27
MBD4-201ENST00000249910 DPF2Q92785 391 aa16.77■□□□□ 0.27
MBD4-201ENST00000249910 TMEM60Q9H2L4 133 aa16.77■□□□□ 0.27
MBD4-201ENST00000249910 HOOK1Q9UJC3 728 aaKnown RBP16.77■□□□□ 0.27
MBD4-201ENST00000249910 SMTNL1A8MU46 457 aa16.76■□□□□ 0.27
MBD4-201ENST00000249910 CDC25BP30305 580 aa16.76■□□□□ 0.27
MBD4-201ENST00000249910 SHMT1P34896 483 aa16.76■□□□□ 0.27
MBD4-201ENST00000249910 MYL5Q02045 173 aa16.76■□□□□ 0.27
MBD4-201ENST00000249910 DHX37Q8IY37 1157 aaKnown RBP16.76■□□□□ 0.27
MBD4-201ENST00000249910 PAGE5Q96GU1 130 aa16.76■□□□□ 0.27
MBD4-201ENST00000249910 GPCPD1Q9NPB8 672 aa16.76■□□□□ 0.27
MBD4-201ENST00000249910 SH3GLB2Q9NR46 395 aa16.76■□□□□ 0.27
MBD4-201ENST00000249910 PP2D1A8MPX8 630 aa16.76■□□□□ 0.27
MBD4-201ENST00000249910 SLFN14P0C7P3 912 aa16.76■□□□□ 0.27
MBD4-201ENST00000249910 FANCCQ00597 558 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms