RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 TRIM21P19474 475 aaKnown RBP14.22□□□□□ -0.13
RAB3IP-201ENST00000247833 MTIF2P46199 727 aaKnown RBP14.22□□□□□ -0.13
RAB3IP-201ENST00000247833 WWC2Q6AWC2 1192 aa14.22□□□□□ -0.13
RAB3IP-201ENST00000247833 PARD6BQ9BYG5 372 aa14.22□□□□□ -0.13
RAB3IP-201ENST00000247833 A0A1B0GTH6 734 aa14.21□□□□□ -0.13
RAB3IP-201ENST00000247833 CCDC66A2RUB6 948 aa14.21□□□□□ -0.13
RAB3IP-201ENST00000247833 SSBP05455 408 aaKnown RBP eCLIP14.21□□□□□ -0.13
RAB3IP-201ENST00000247833 SARSP49591 514 aaKnown RBP14.21□□□□□ -0.13
RAB3IP-201ENST00000247833 COPB1P53618 953 aaKnown RBP14.21□□□□□ -0.13
RAB3IP-201ENST00000247833 ASIC1P78348 528 aa14.21□□□□□ -0.13
RAB3IP-201ENST00000247833 TPTE2Q6XPS3 522 aa14.21□□□□□ -0.13
RAB3IP-201ENST00000247833 CCDC102AQ96A19 550 aa14.21□□□□□ -0.13
RAB3IP-201ENST00000247833 ZFP91Q96JP5 570 aaPredicted RBP14.21□□□□□ -0.13
RAB3IP-201ENST00000247833 CAPZA3Q96KX2 299 aa14.21□□□□□ -0.13
RAB3IP-201ENST00000247833 TCP11L1Q9NUJ3 509 aa14.21□□□□□ -0.13
RAB3IP-201ENST00000247833 RMND1Q9NWS8 449 aa14.21□□□□□ -0.13
RAB3IP-201ENST00000247833 PARP4Q9UKK3 1724 aaKnown RBP14.21□□□□□ -0.13
RAB3IP-201ENST00000247833 SPEF2Q9C093 1822 aa14.21□□□□□ -0.13
RAB3IP-201ENST00000247833 PHACTR2O75167 634 aa14.21□□□□□ -0.13
RAB3IP-201ENST00000247833 IDEP14735 1019 aa14.21□□□□□ -0.13
RAB3IP-201ENST00000247833 SPAG1Q07617 926 aa14.21□□□□□ -0.13
RAB3IP-201ENST00000247833 SHISA4Q96DD7 197 aa14.21□□□□□ -0.13
RAB3IP-201ENST00000247833 CDK5RAP3Q96JB5 506 aa14.21□□□□□ -0.13
RAB3IP-201ENST00000247833 ADGRG1Q9Y653 693 aa14.21□□□□□ -0.13
RAB3IP-201ENST00000247833 MFAP3LO75121 409 aa14.21□□□□□ -0.14
RAB3IP-201ENST00000247833 TNNT3P45378 269 aaPredicted RBP14.21□□□□□ -0.14
RAB3IP-201ENST00000247833 GYS2P54840 703 aa14.21□□□□□ -0.14
RAB3IP-201ENST00000247833 DPYDQ12882 1025 aa14.21□□□□□ -0.14
RAB3IP-201ENST00000247833 GPS2Q13227 327 aa14.21□□□□□ -0.14
RAB3IP-201ENST00000247833 CCDC93Q567U6 631 aa14.21□□□□□ -0.14
RAB3IP-201ENST00000247833 TXNRD3Q86VQ6 643 aa14.21□□□□□ -0.14
RAB3IP-201ENST00000247833 ZNHIT6Q9NWK9 470 aaKnown RBP14.21□□□□□ -0.14
RAB3IP-201ENST00000247833 ZNF804BA4D1E1 1349 aa14.21□□□□□ -0.14
RAB3IP-201ENST00000247833 GTPBP6O43824 516 aaPredicted RBP14.2□□□□□ -0.14
RAB3IP-201ENST00000247833 OAS2P29728 719 aaKnown RBP14.2□□□□□ -0.14
RAB3IP-201ENST00000247833 EIF6P56537 245 aaKnown RBP14.2□□□□□ -0.14
RAB3IP-201ENST00000247833 NGLY1Q96IV0 654 aa14.2□□□□□ -0.14
RAB3IP-201ENST00000247833 ADD3Q9UEY8 706 aaKnown RBP14.2□□□□□ -0.14
RAB3IP-201ENST00000247833 LUC7L2Q9Y383 392 aaKnown RBP14.2□□□□□ -0.14
RAB3IP-201ENST00000247833 CNTNAP5Q8WYK1 1306 aa14.2□□□□□ -0.14
RAB3IP-201ENST00000247833 ENC1O14682 589 aa14.2□□□□□ -0.14
RAB3IP-201ENST00000247833 PSMA7O14818 248 aa14.2□□□□□ -0.14
RAB3IP-201ENST00000247833 H2AFXP16104 143 aaPredicted RBP14.2□□□□□ -0.14
RAB3IP-201ENST00000247833 TMEM139Q8IV31 216 aa14.2□□□□□ -0.14
RAB3IP-201ENST00000247833 GPR161Q8N6U8 529 aaKnown RBP14.2□□□□□ -0.14
RAB3IP-201ENST00000247833 C8orf37Q96NL8 207 aa14.2□□□□□ -0.14
RAB3IP-201ENST00000247833 ARPP21Q9UBL0 812 aaPredicted RBP14.2□□□□□ -0.14
RAB3IP-201ENST00000247833 MYO5AQ9Y4I1 1855 aaKnown RBP14.2□□□□□ -0.14
RAB3IP-201ENST00000247833 F8W031 263 aaPredicted RBP14.2□□□□□ -0.14
RAB3IP-201ENST00000247833 FANCGO15287 622 aa14.2□□□□□ -0.14
RAB3IP-201ENST00000247833 CCNT1O60563 726 aaKnown RBP14.2□□□□□ -0.14
RAB3IP-201ENST00000247833 ATP2C1P98194 919 aaPredicted RBP14.2□□□□□ -0.14
RAB3IP-201ENST00000247833 DRC1Q96MC2 740 aa14.2□□□□□ -0.14
RAB3IP-201ENST00000247833 HINFPQ9BQA5 517 aa14.2□□□□□ -0.14
RAB3IP-201ENST00000247833 XDHP47989 1333 aa14.2□□□□□ -0.14
RAB3IP-201ENST00000247833 CTAGE15A4D2H0 777 aa14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 PPP1R3GB7ZBB8 358 aa14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 BAG3O95817 575 aa14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 CTAGE8P0CG41 777 aa14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 PRCPP42785 496 aa14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 SPTY2D1Q68D10 685 aaPredicted RBP14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 CTAGE6Q86UF2 777 aa14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 CTAGE4Q8IX94 777 aa14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 NEK11Q8NG66 645 aa14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 SEC63Q9UGP8 760 aaKnown RBP14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 ADAMTS3O15072 1205 aa14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 NAP1L1P55209 391 aaKnown RBP14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 TBX2Q13207 712 aaPredicted RBP14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 PANX2Q96RD6 677 aa14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 KCND1Q9NSA2 647 aa14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 ATP8A2Q9NTI2 1148 aa14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 MRFAP1Q9Y605 127 aa14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 GYPCP04921 128 aa14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 LMAN1P49257 510 aa14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 PICALMQ13492 652 aa14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 SMC1AQ14683 1233 aaKnown RBP14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 PFKFB3Q16875 520 aaPredicted RBP14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 HSP90B2PQ58FF3 399 aa14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 RASGRP2Q7LDG7 609 aa14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 TMTC1Q8IUR5 882 aa14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 CSGALNACT2Q8N6G5 542 aa14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 TANGO6Q9C0B7 1094 aa14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 ANKRD2Q9GZV1 360 aa14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 EXOC1Q9NV70 894 aa14.19□□□□□ -0.14
RAB3IP-201ENST00000247833 A0A0U1RQG5 324 aaPredicted RBP14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 ERLIN1O75477 346 aa14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 DNA2P51530 1060 aa14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 RCAN1P53805 252 aa14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 FAM193AP78312 1265 aa14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 PDE4DQ08499 809 aa14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 NT5DC1Q5TFE4 455 aa14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 CYP26C1Q6V0L0 522 aa14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 LINC00116Q8NCU8 138 aa14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 SH3RF3Q8TEJ3 882 aaPredicted RBP14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 NAPGQ99747 312 aaPredicted RBP14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 MTA3Q9BTC8 594 aa14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 TFR2Q9UP52 801 aa14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 FHOD1Q9Y613 1164 aa14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 MAP3K9P80192 1104 aa14.18□□□□□ -0.14
RAB3IP-201ENST00000247833 CCDC122Q5T0U0 273 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms