RNA–Protein interactions for RNA: ENST00000245414.8

IRF1-201, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-201ENST00000245414 TSPOAP1O95153 1857 aa10.85□□□□□ -0.67
IRF1-201ENST00000245414 EPB41P11171 864 aaKnown RBP10.85□□□□□ -0.67
IRF1-201ENST00000245414 CCT6AP40227 531 aaKnown RBP10.85□□□□□ -0.67
IRF1-201ENST00000245414 ZC3H6P61129 1189 aaKnown RBP10.85□□□□□ -0.67
IRF1-201ENST00000245414 IDI1Q13907 227 aa10.85□□□□□ -0.67
IRF1-201ENST00000245414 EMBQ6PCB8 327 aa10.85□□□□□ -0.67
IRF1-201ENST00000245414 CRELD2Q6UXH1 353 aaPredicted RBP10.85□□□□□ -0.67
IRF1-201ENST00000245414 TFR2Q9UP52 801 aa10.85□□□□□ -0.67
IRF1-201ENST00000245414 NRXN1Q9ULB1 1477 aa10.85□□□□□ -0.67
IRF1-201ENST00000245414 ZNF189O75820 626 aaPredicted RBP10.85□□□□□ -0.67
IRF1-201ENST00000245414 YEATS4O95619 227 aa10.85□□□□□ -0.67
IRF1-201ENST00000245414 MAGEA10P43363 369 aaPredicted RBP10.85□□□□□ -0.67
IRF1-201ENST00000245414 FLIIQ13045 1269 aa10.85□□□□□ -0.67
IRF1-201ENST00000245414 PANK4Q9NVE7 773 aa10.85□□□□□ -0.67
IRF1-201ENST00000245414 HMG20BQ9P0W2 317 aa10.85□□□□□ -0.67
IRF1-201ENST00000245414 CEP131Q9UPN4 1083 aa10.85□□□□□ -0.67
IRF1-201ENST00000245414 MACROD2A1Z1Q3 448 aa10.85□□□□□ -0.67
IRF1-201ENST00000245414 PFDN1O60925 122 aa10.85□□□□□ -0.67
IRF1-201ENST00000245414 PAX3P23760 479 aa10.85□□□□□ -0.67
IRF1-201ENST00000245414 TMOD1P28289 359 aa10.85□□□□□ -0.67
IRF1-201ENST00000245414 QPCTQ16769 361 aa10.85□□□□□ -0.67
IRF1-201ENST00000245414 AMOTQ4VCS5 1084 aa10.85□□□□□ -0.67
IRF1-201ENST00000245414 CCDC38Q502W7 563 aa10.85□□□□□ -0.67
IRF1-201ENST00000245414 MTHFD1LQ6UB35 978 aa10.85□□□□□ -0.67
IRF1-201ENST00000245414 SDCCAG8Q86SQ7 713 aaPredicted RBP10.85□□□□□ -0.67
IRF1-201ENST00000245414 LLPHQ9BRT6 129 aaKnown RBP10.85□□□□□ -0.67
IRF1-201ENST00000245414 QRICH2Q9H0J4 1663 aa10.84□□□□□ -0.67
IRF1-201ENST00000245414 CDC27P30260 824 aa10.84□□□□□ -0.67
IRF1-201ENST00000245414 KRT9P35527 623 aa10.84□□□□□ -0.67
IRF1-201ENST00000245414 FMR1Q06787 632 aaKnown RBP eCLIP10.84□□□□□ -0.67
IRF1-201ENST00000245414 PPARAQ07869 468 aa10.84□□□□□ -0.67
IRF1-201ENST00000245414 PAK2Q13177 524 aa10.84□□□□□ -0.67
IRF1-201ENST00000245414 ANO1Q5XXA6 986 aa10.84□□□□□ -0.67
IRF1-201ENST00000245414 AACSQ86V21 672 aa10.84□□□□□ -0.67
IRF1-201ENST00000245414 RNF168Q8IYW5 571 aaPredicted RBP10.84□□□□□ -0.67
IRF1-201ENST00000245414 ATP6V1G3Q96LB4 118 aa10.84□□□□□ -0.67
IRF1-201ENST00000245414 BOLA2Q9H3K6 86 aa10.84□□□□□ -0.67
IRF1-201ENST00000245414 KDRP35968 1356 aa10.84□□□□□ -0.67
IRF1-201ENST00000245414 A0A0D9SFI3 127 aa10.84□□□□□ -0.67
IRF1-201ENST00000245414 GOLGA6L10A0A0M3HER8 536 aa10.84□□□□□ -0.67
IRF1-201ENST00000245414 SPDYE5A6NIY4 337 aa10.84□□□□□ -0.67
IRF1-201ENST00000245414 PHF20L1A8MW92 1017 aa10.84□□□□□ -0.67
IRF1-201ENST00000245414 DNAJC8O75937 253 aaPredicted RBP10.84□□□□□ -0.67
IRF1-201ENST00000245414 ALDH3A1P30838 453 aa10.84□□□□□ -0.67
IRF1-201ENST00000245414 FXR1P51114 621 aaKnown RBP eCLIP10.84□□□□□ -0.67
IRF1-201ENST00000245414 DYNC1I2Q13409 638 aaKnown RBP10.84□□□□□ -0.67
IRF1-201ENST00000245414 ANKRD20A2Q5SQ80 823 aa10.84□□□□□ -0.67
IRF1-201ENST00000245414 ANKRD20A1Q5TYW2 823 aa10.84□□□□□ -0.67
IRF1-201ENST00000245414 ANKRD20A3Q5VUR7 823 aa10.84□□□□□ -0.67
IRF1-201ENST00000245414 NUGGCQ68CJ6 796 aa10.84□□□□□ -0.67
IRF1-201ENST00000245414 C8orf74Q6P047 294 aa10.84□□□□□ -0.67
IRF1-201ENST00000245414 RHBDL2Q9NX52 303 aa10.84□□□□□ -0.67
IRF1-201ENST00000245414 TUBE1Q9UJT0 475 aa10.84□□□□□ -0.67
IRF1-201ENST00000245414 hCG_2014768A0A024R1R8 64 aa10.83□□□□□ -0.67
IRF1-201ENST00000245414 CHL1O00533 1208 aa10.83□□□□□ -0.67
IRF1-201ENST00000245414 DESP17661 470 aa10.83□□□□□ -0.67
IRF1-201ENST00000245414 SEPT14Q6ZU15 432 aa10.83□□□□□ -0.67
IRF1-201ENST00000245414 NAF1Q96HR8 494 aaKnown RBP10.83□□□□□ -0.67
IRF1-201ENST00000245414 COG3Q96JB2 828 aa10.83□□□□□ -0.67
IRF1-201ENST00000245414 SLC5A4Q9NY91 659 aa10.83□□□□□ -0.67
IRF1-201ENST00000245414 EPN1Q9Y6I3 576 aaPredicted RBP10.83□□□□□ -0.67
IRF1-201ENST00000245414 CPLX1O14810 134 aa10.83□□□□□ -0.68
IRF1-201ENST00000245414 LIN7AO14910 233 aaPredicted RBP10.83□□□□□ -0.68
IRF1-201ENST00000245414 KRT86O43790 486 aa10.83□□□□□ -0.68
IRF1-201ENST00000245414 TRIM37O94972 964 aa10.83□□□□□ -0.68
IRF1-201ENST00000245414 PARP1P09874 1014 aaKnown RBP10.83□□□□□ -0.68
IRF1-201ENST00000245414 ATP2A2P16615 1042 aaKnown RBP10.83□□□□□ -0.68
IRF1-201ENST00000245414 LACTBP83111 547 aaPredicted RBP10.83□□□□□ -0.68
IRF1-201ENST00000245414 ATP11AP98196 1134 aa10.83□□□□□ -0.68
IRF1-201ENST00000245414 CCDC129Q6ZRS4 1044 aa10.83□□□□□ -0.68
IRF1-201ENST00000245414 CCDC197Q8NCU1 140 aa10.83□□□□□ -0.68
IRF1-201ENST00000245414 MAIP1Q8WWC4 291 aa10.83□□□□□ -0.68
IRF1-201ENST00000245414 PRCCQ92733 491 aaPredicted RBP10.83□□□□□ -0.68
IRF1-201ENST00000245414 DTNBP1Q96EV8 351 aa10.83□□□□□ -0.68
IRF1-201ENST00000245414 ABCF2Q9UG63 623 aa10.83□□□□□ -0.68
IRF1-201ENST00000245414 NCKAP5LQ9HCH0 1330 aa10.83□□□□□ -0.68
IRF1-201ENST00000245414 HMGB1P1B2RPK0 211 aaPredicted RBP10.83□□□□□ -0.68
IRF1-201ENST00000245414 CNGA1P29973 690 aa10.83□□□□□ -0.68
IRF1-201ENST00000245414 PAFAH1B1P43034 410 aa10.83□□□□□ -0.68
IRF1-201ENST00000245414 TEFQ10587 303 aa10.83□□□□□ -0.68
IRF1-201ENST00000245414 NR1I3Q14994 352 aa10.83□□□□□ -0.68
IRF1-201ENST00000245414 LONP2Q86WA8 852 aa10.83□□□□□ -0.68
IRF1-201ENST00000245414 SPICE1Q8N0Z3 855 aa10.83□□□□□ -0.68
IRF1-201ENST00000245414 TSPYL2Q9H2G4 693 aaPredicted RBP10.83□□□□□ -0.68
IRF1-201ENST00000245414 HAUS4Q9H6D7 363 aa10.83□□□□□ -0.68
IRF1-201ENST00000245414 NFU1Q9UMS0 254 aa10.83□□□□□ -0.68
IRF1-201ENST00000245414 GCOM1H8Y6P7 765 aaPredicted RBP10.82□□□□□ -0.68
IRF1-201ENST00000245414 PDE2AO00408 941 aaPredicted RBP10.82□□□□□ -0.68
IRF1-201ENST00000245414 MYZAPP0CAP1 466 aa10.82□□□□□ -0.68
IRF1-201ENST00000245414 CDC25AP30304 524 aa10.82□□□□□ -0.68
IRF1-201ENST00000245414 DNA2P51530 1060 aa10.82□□□□□ -0.68
IRF1-201ENST00000245414 HLTFQ14527 1009 aaKnown RBP eCLIP10.82□□□□□ -0.68
IRF1-201ENST00000245414 PPP4R3AQ6IN85 833 aa10.82□□□□□ -0.68
IRF1-201ENST00000245414 RINLQ6ZS11 566 aa10.82□□□□□ -0.68
IRF1-201ENST00000245414 ERICH1Q86X53 443 aa10.82□□□□□ -0.68
IRF1-201ENST00000245414 RBM17Q96I25 401 aaKnown RBP10.82□□□□□ -0.68
IRF1-201ENST00000245414 FGD4Q96M96 766 aa10.82□□□□□ -0.68
IRF1-201ENST00000245414 STIM2Q9P246 746 aa10.82□□□□□ -0.68
IRF1-201ENST00000245414 EID1Q9Y6B2 187 aa10.82□□□□□ -0.68
IRF1-201ENST00000245414 CDK12Q9NYV4 1490 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms