RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 LTBP1Q14766 1721 aa24.93■■□□□ 1.58
RNF39-201ENST00000244360 BTDP43251 543 aa24.93■■□□□ 1.58
RNF39-201ENST00000244360 PLCD1P51178 756 aa24.93■■□□□ 1.58
RNF39-201ENST00000244360 PIK3AP1Q6ZUJ8 805 aa24.93■■□□□ 1.58
RNF39-201ENST00000244360 FAM163AQ96GL9 167 aaPredicted RBP24.93■■□□□ 1.58
RNF39-201ENST00000244360 PRDM10Q9NQV6 1147 aa24.93■■□□□ 1.58
RNF39-201ENST00000244360 SNED1Q8TER0 1413 aa24.93■■□□□ 1.58
RNF39-201ENST00000244360 KLRG2A4D1S0 409 aaPredicted RBP24.93■■□□□ 1.58
RNF39-201ENST00000244360 USP17L3A6NCW0 530 aa24.93■■□□□ 1.58
RNF39-201ENST00000244360 USP17L4A6NCW7 530 aa24.93■■□□□ 1.58
RNF39-201ENST00000244360 TSPY3P0CV98 308 aa24.93■■□□□ 1.58
RNF39-201ENST00000244360 TSPY8P0CW00 308 aa24.93■■□□□ 1.58
RNF39-201ENST00000244360 ERCC5P28715 1186 aaPredicted RBP24.93■■□□□ 1.58
RNF39-201ENST00000244360 USP17L1Q7RTZ2 530 aa24.93■■□□□ 1.58
RNF39-201ENST00000244360 STAG2Q8N3U4 1231 aa24.93■■□□□ 1.58
RNF39-201ENST00000244360 PAGE5Q96GU1 130 aa24.93■■□□□ 1.58
RNF39-201ENST00000244360 BAZ2BQ9UIF8 2168 aaKnown RBP24.93■■□□□ 1.58
RNF39-201ENST00000244360 ADAMTS3O15072 1205 aa24.92■■□□□ 1.58
RNF39-201ENST00000244360 ZNF827Q17R98 1081 aa24.92■■□□□ 1.58
RNF39-201ENST00000244360 CFAP100Q494V2 611 aa24.92■■□□□ 1.58
RNF39-201ENST00000244360 MAPKAPK5Q8IW41 473 aa24.92■■□□□ 1.58
RNF39-201ENST00000244360 BLIDQ8IZY5 108 aa24.92■■□□□ 1.58
RNF39-201ENST00000244360 ZNF444Q8N0Y2 327 aaPredicted RBP24.92■■□□□ 1.58
RNF39-201ENST00000244360 CRAMP1Q96RY5 1269 aa24.92■■□□□ 1.58
RNF39-201ENST00000244360 INTS13Q9NVM9 706 aa24.92■■□□□ 1.58
RNF39-201ENST00000244360 SPDYE4A6NLX3 237 aa24.92■■□□□ 1.58
RNF39-201ENST00000244360 SLC35G1Q2M3R5 365 aa24.92■■□□□ 1.58
RNF39-201ENST00000244360 C16orf86Q6ZW13 317 aa24.92■■□□□ 1.58
RNF39-201ENST00000244360 FAM177A1Q8N128 213 aaPredicted RBP24.92■■□□□ 1.58
RNF39-201ENST00000244360 SLC44A5Q8NCS7 719 aa24.92■■□□□ 1.58
RNF39-201ENST00000244360 MED15Q96RN5 788 aa24.92■■□□□ 1.58
RNF39-201ENST00000244360 L2HGDHQ9H9P8 463 aa24.92■■□□□ 1.58
RNF39-201ENST00000244360 ZNF287Q9HBT7 754 aa24.92■■□□□ 1.58
RNF39-201ENST00000244360 DDX41Q9UJV9 622 aaKnown RBP24.92■■□□□ 1.58
RNF39-201ENST00000244360 PCDHA4Q9UN74 947 aa24.92■■□□□ 1.58
RNF39-201ENST00000244360 NFE2L3Q9Y4A8 694 aa24.92■■□□□ 1.58
RNF39-201ENST00000244360 GAKO14976 1311 aa24.91■■□□□ 1.58
RNF39-201ENST00000244360 PLCG2P16885 1265 aa24.91■■□□□ 1.58
RNF39-201ENST00000244360 DDR1Q08345 913 aa24.91■■□□□ 1.58
RNF39-201ENST00000244360 VWA3AA6NCI4 1184 aa24.9■■□□□ 1.58
RNF39-201ENST00000244360 M0R2N6 131 aa24.9■■□□□ 1.58
RNF39-201ENST00000244360 DPYDQ12882 1025 aa24.9■■□□□ 1.58
RNF39-201ENST00000244360 DAGLBQ8NCG7 672 aa24.9■■□□□ 1.58
RNF39-201ENST00000244360 TBC1D16Q8TBP0 767 aa24.9■■□□□ 1.58
RNF39-201ENST00000244360 PALM3A6NDB9 673 aaPredicted RBP24.9■■□□□ 1.58
RNF39-201ENST00000244360 RHBDL3P58872 404 aa24.9■■□□□ 1.58
RNF39-201ENST00000244360 E2F4Q16254 413 aa24.9■■□□□ 1.58
RNF39-201ENST00000244360 ARL6IP4Q66PJ3 421 aaKnown RBP24.9■■□□□ 1.58
RNF39-201ENST00000244360 TBC1D22AQ8WUA7 517 aa24.9■■□□□ 1.58
RNF39-201ENST00000244360 GSDMAQ96QA5 445 aa24.9■■□□□ 1.58
RNF39-201ENST00000244360 TMEM47Q9BQJ4 181 aa24.9■■□□□ 1.58
RNF39-201ENST00000244360 POLLQ9UGP5 575 aa24.9■■□□□ 1.58
RNF39-201ENST00000244360 SAP30BPQ9UHR5 308 aaKnown RBP24.9■■□□□ 1.58
RNF39-201ENST00000244360 FAM205AQ6ZU69 1335 aa24.9■■□□□ 1.58
RNF39-201ENST00000244360 POLRMTO00411 1230 aaKnown RBP24.89■■□□□ 1.58
RNF39-201ENST00000244360 TEX11Q8IYF3 940 aa24.89■■□□□ 1.58
RNF39-201ENST00000244360 C4orf32Q8N8J7 132 aa24.89■■□□□ 1.58
RNF39-201ENST00000244360 LZTS2Q9BRK4 669 aa24.89■■□□□ 1.58
RNF39-201ENST00000244360 PYM1Q9BRP8 204 aaKnown RBP24.89■■□□□ 1.58
RNF39-201ENST00000244360 TMX1Q9H3N1 280 aa24.89■■□□□ 1.58
RNF39-201ENST00000244360 NAA30Q147X3 362 aaPredicted RBP24.89■■□□□ 1.57
RNF39-201ENST00000244360 IL17AQ16552 155 aa24.89■■□□□ 1.57
RNF39-201ENST00000244360 GALNT17Q6IS24 598 aa24.89■■□□□ 1.57
RNF39-201ENST00000244360 FCHSD1Q86WN1 690 aa24.89■■□□□ 1.57
RNF39-201ENST00000244360 GPKOWQ92917 476 aaPredicted RBP eCLIP24.89■■□□□ 1.57
RNF39-201ENST00000244360 FLT1P17948 1338 aa24.89■■□□□ 1.57
RNF39-201ENST00000244360 TMEM232C9JQI7 657 aa24.88■■□□□ 1.57
RNF39-201ENST00000244360 CYTH3O43739 400 aa24.88■■□□□ 1.57
RNF39-201ENST00000244360 TYW1BQ6NUM6 668 aa24.88■■□□□ 1.57
RNF39-201ENST00000244360 TMC4Q7Z404 712 aa24.88■■□□□ 1.57
RNF39-201ENST00000244360 SLF2Q8IX21 1173 aa24.88■■□□□ 1.57
RNF39-201ENST00000244360 CDK8P49336 464 aa24.88■■□□□ 1.57
RNF39-201ENST00000244360 MFSD14BQ5SR56 506 aa24.88■■□□□ 1.57
RNF39-201ENST00000244360 NEDD1Q8NHV4 660 aa24.88■■□□□ 1.57
RNF39-201ENST00000244360 TOP1P11387 765 aaKnown RBP24.87■■□□□ 1.57
RNF39-201ENST00000244360 MCM7P33993 719 aa24.87■■□□□ 1.57
RNF39-201ENST00000244360 AFMP43652 599 aa24.87■■□□□ 1.57
RNF39-201ENST00000244360 TBX2Q13207 712 aaPredicted RBP24.87■■□□□ 1.57
RNF39-201ENST00000244360 CUL4BQ13620 913 aa24.87■■□□□ 1.57
RNF39-201ENST00000244360 WWC2Q6AWC2 1192 aa24.87■■□□□ 1.57
RNF39-201ENST00000244360 TRMT44Q8IYL2 757 aaKnown RBP24.87■■□□□ 1.57
RNF39-201ENST00000244360 CCDC148Q8NFR7 591 aa24.87■■□□□ 1.57
RNF39-201ENST00000244360 IQUBQ8NA54 791 aa24.86■■□□□ 1.57
RNF39-201ENST00000244360 BARHL2Q9NY43 387 aa24.86■■□□□ 1.57
RNF39-201ENST00000244360 PHLPP2Q6ZVD8 1323 aa24.86■■□□□ 1.57
RNF39-201ENST00000244360 LONP1P36776 959 aaKnown RBP24.86■■□□□ 1.57
RNF39-201ENST00000244360 NOVP48745 357 aa24.86■■□□□ 1.57
RNF39-201ENST00000244360 PDXDC2PQ6P474 469 aa24.86■■□□□ 1.57
RNF39-201ENST00000244360 EYA3Q99504 573 aa24.86■■□□□ 1.57
RNF39-201ENST00000244360 SPZ1Q9BXG8 430 aa24.86■■□□□ 1.57
RNF39-201ENST00000244360 STXBP3O00186 592 aa24.85■■□□□ 1.57
RNF39-201ENST00000244360 STX8Q9UNK0 236 aa24.85■■□□□ 1.57
RNF39-201ENST00000244360 FOCADQ5VW36 1801 aa24.85■■□□□ 1.57
RNF39-201ENST00000244360 GABPB1Q06547 395 aaPredicted RBP24.84■■□□□ 1.57
RNF39-201ENST00000244360 CCDC93Q567U6 631 aa24.84■■□□□ 1.57
RNF39-201ENST00000244360 SPATA1Q5VX52 437 aa24.84■■□□□ 1.57
RNF39-201ENST00000244360 SYT10Q6XYQ8 523 aa24.84■■□□□ 1.57
RNF39-201ENST00000244360 PCDHA6Q9UN73 950 aa24.84■■□□□ 1.57
RNF39-201ENST00000244360 PCDHA8Q9Y5H6 950 aa24.84■■□□□ 1.57
RNF39-201ENST00000244360 CD44P16070 742 aaKnown RBP24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms