RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 HEATR3Q7Z4Q2 680 aa26.58■■□□□ 1.85
MSX2-201ENST00000239243 PLA2G4DQ86XP0 818 aa26.58■■□□□ 1.85
MSX2-201ENST00000239243 DHX40Q8IX18 779 aaKnown RBP26.58■■□□□ 1.85
MSX2-201ENST00000239243 RRP36Q96EU6 259 aaKnown RBP26.58■■□□□ 1.85
MSX2-201ENST00000239243 CCDC17Q96LX7 622 aa26.58■■□□□ 1.85
MSX2-201ENST00000239243 IDI2Q9BXS1 227 aa26.58■■□□□ 1.85
MSX2-201ENST00000239243 CSRNP2Q9H175 543 aa26.58■■□□□ 1.85
MSX2-201ENST00000239243 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.58■■□□□ 1.85
MSX2-201ENST00000239243 SEC63Q9UGP8 760 aaKnown RBP26.58■■□□□ 1.85
MSX2-201ENST00000239243 TTLL1O95922 423 aa26.58■■□□□ 1.85
MSX2-201ENST00000239243 RBM5P52756 815 aaKnown RBP eCLIP26.58■■□□□ 1.85
MSX2-201ENST00000239243 ATP2C1P98194 919 aaPredicted RBP26.58■■□□□ 1.85
MSX2-201ENST00000239243 GRIN1Q05586 938 aa26.58■■□□□ 1.85
MSX2-201ENST00000239243 ASPRV1Q53RT3 343 aa26.58■■□□□ 1.85
MSX2-201ENST00000239243 SLC16A10Q8TF71 515 aa26.58■■□□□ 1.85
MSX2-201ENST00000239243 STXBP3O00186 592 aa26.57■■□□□ 1.84
MSX2-201ENST00000239243 ZNF500O60304 480 aaPredicted RBP26.57■■□□□ 1.84
MSX2-201ENST00000239243 GOLGA8HP0CJ92 632 aa26.57■■□□□ 1.84
MSX2-201ENST00000239243 ZNF75DP51815 510 aa26.57■■□□□ 1.84
MSX2-201ENST00000239243 SLC35G1Q2M3R5 365 aa26.57■■□□□ 1.84
MSX2-201ENST00000239243 DPCR1Q3MIW9 517 aa26.57■■□□□ 1.84
MSX2-201ENST00000239243 SPECC1Q5M775 1068 aa26.57■■□□□ 1.84
MSX2-201ENST00000239243 PPIP5K2O43314 1243 aa26.57■■□□□ 1.84
MSX2-201ENST00000239243 SHMT1P34896 483 aa26.57■■□□□ 1.84
MSX2-201ENST00000239243 NFIAQ12857 509 aa26.57■■□□□ 1.84
MSX2-201ENST00000239243 USP17L2Q6R6M4 530 aa26.57■■□□□ 1.84
MSX2-201ENST00000239243 hCG_1984214I3L0E3 225 aa26.56■■□□□ 1.84
MSX2-201ENST00000239243 POLR2DO15514 142 aaKnown RBP26.56■■□□□ 1.84
MSX2-201ENST00000239243 ZNF174Q15697 407 aa26.56■■□□□ 1.84
MSX2-201ENST00000239243 METTL16Q86W50 562 aaKnown RBP26.56■■□□□ 1.84
MSX2-201ENST00000239243 TTLL6Q8N841 843 aa26.56■■□□□ 1.84
MSX2-201ENST00000239243 ZNF713Q8N859 430 aaPredicted RBP26.56■■□□□ 1.84
MSX2-201ENST00000239243 CCDC194A0A1B0GVG4 234 aa26.55■■□□□ 1.84
MSX2-201ENST00000239243 PDHBP11177 359 aa26.55■■□□□ 1.84
MSX2-201ENST00000239243 CCDC93Q567U6 631 aa26.55■■□□□ 1.84
MSX2-201ENST00000239243 RTKN2Q8IZC4 609 aa26.55■■□□□ 1.84
MSX2-201ENST00000239243 AOPEPQ8N6M6 819 aa26.55■■□□□ 1.84
MSX2-201ENST00000239243 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.55■■□□□ 1.84
MSX2-201ENST00000239243 M0R2N6 131 aa26.55■■□□□ 1.84
MSX2-201ENST00000239243 CDC25BP30305 580 aa26.55■■□□□ 1.84
MSX2-201ENST00000239243 TPM4P67936 248 aa26.55■■□□□ 1.84
MSX2-201ENST00000239243 PTGDRQ13258 359 aa26.55■■□□□ 1.84
MSX2-201ENST00000239243 NOM1Q5C9Z4 860 aaKnown RBP26.55■■□□□ 1.84
MSX2-201ENST00000239243 A0A087WWV3 80 aa26.54■■□□□ 1.84
MSX2-201ENST00000239243 SMTNL1A8MU46 457 aa26.54■■□□□ 1.84
MSX2-201ENST00000239243 BIN1O00499 593 aa26.54■■□□□ 1.84
MSX2-201ENST00000239243 C21orf2O43822 256 aa26.54■■□□□ 1.84
MSX2-201ENST00000239243 PNOCQ13519 176 aa26.54■■□□□ 1.84
MSX2-201ENST00000239243 ZMYND12Q9H0C1 365 aa26.54■■□□□ 1.84
MSX2-201ENST00000239243 GREB1LQ9C091 1923 aaPredicted RBP26.54■■□□□ 1.84
MSX2-201ENST00000239243 SNHG28P0DPA3 235 aa26.54■■□□□ 1.84
MSX2-201ENST00000239243 ARL6IP4Q66PJ3 421 aaKnown RBP26.54■■□□□ 1.84
MSX2-201ENST00000239243 TYW1BQ6NUM6 668 aa26.54■■□□□ 1.84
MSX2-201ENST00000239243 RIOX1Q9H6W3 641 aa26.54■■□□□ 1.84
MSX2-201ENST00000239243 PI4KBQ9UBF8 816 aa26.54■■□□□ 1.84
MSX2-201ENST00000239243 USP17L5A8MUK1 530 aa26.53■■□□□ 1.84
MSX2-201ENST00000239243 GNA11P29992 359 aa26.53■■□□□ 1.84
MSX2-201ENST00000239243 NAPAP54920 295 aa26.53■■□□□ 1.84
MSX2-201ENST00000239243 POSTNQ15063 836 aa26.53■■□□□ 1.84
MSX2-201ENST00000239243 PYM1Q9BRP8 204 aaKnown RBP26.53■■□□□ 1.84
MSX2-201ENST00000239243 PSMD1Q99460 953 aa26.53■■□□□ 1.84
MSX2-201ENST00000239243 C6orf50Q9HD87 102 aa26.53■■□□□ 1.84
MSX2-201ENST00000239243 CLIP2Q9UDT6 1046 aa26.53■■□□□ 1.84
MSX2-201ENST00000239243 WNT7AO00755 349 aa26.52■■□□□ 1.84
MSX2-201ENST00000239243 MDM2Q00987 491 aaPredicted RBP26.52■■□□□ 1.84
MSX2-201ENST00000239243 MRFAP1L1Q96HT8 127 aa26.52■■□□□ 1.84
MSX2-201ENST00000239243 SERTAD1Q9UHV2 236 aa26.52■■□□□ 1.84
MSX2-201ENST00000239243 PCDHA6Q9UN73 950 aa26.52■■□□□ 1.84
MSX2-201ENST00000239243 PCDHA8Q9Y5H6 950 aa26.52■■□□□ 1.84
MSX2-201ENST00000239243 PSME4Q14997 1843 aa26.52■■□□□ 1.84
MSX2-201ENST00000239243 SOGA3Q5TF21 947 aa26.51■■□□□ 1.84
MSX2-201ENST00000239243 LRRC47Q8N1G4 583 aaKnown RBP26.51■■□□□ 1.84
MSX2-201ENST00000239243 IKBKBO14920 756 aa26.51■■□□□ 1.83
MSX2-201ENST00000239243 MCM7P33993 719 aa26.51■■□□□ 1.83
MSX2-201ENST00000239243 RASGRP2Q7LDG7 609 aa26.51■■□□□ 1.83
MSX2-201ENST00000239243 HOMER1Q86YM7 354 aa26.51■■□□□ 1.83
MSX2-201ENST00000239243 DRC7Q8IY82 874 aa26.51■■□□□ 1.83
MSX2-201ENST00000239243 SPC24Q8NBT2 197 aa26.51■■□□□ 1.83
MSX2-201ENST00000239243 TRIM34Q9BYJ4 488 aa26.51■■□□□ 1.83
MSX2-201ENST00000239243 FAM198AQ9UFP1 575 aa26.51■■□□□ 1.83
MSX2-201ENST00000239243 PCDHA5Q9Y5H7 936 aa26.51■■□□□ 1.83
MSX2-201ENST00000239243 MPHOSPH10O00566 681 aaKnown RBP26.5■■□□□ 1.83
MSX2-201ENST00000239243 ACTN4O43707 911 aaKnown RBP26.5■■□□□ 1.83
MSX2-201ENST00000239243 DEFB132Q7Z7B7 95 aa26.5■■□□□ 1.83
MSX2-201ENST00000239243 FOXP4Q8IVH2 680 aaPredicted RBP26.5■■□□□ 1.83
MSX2-201ENST00000239243 ESYT2A0FGR8 921 aa26.5■■□□□ 1.83
MSX2-201ENST00000239243 VWA3AA6NCI4 1184 aa26.5■■□□□ 1.83
MSX2-201ENST00000239243 NT5DC1Q5TFE4 455 aa26.5■■□□□ 1.83
MSX2-201ENST00000239243 KRT25Q7Z3Z0 450 aa26.5■■□□□ 1.83
MSX2-201ENST00000239243 TRIML1Q8N9V2 468 aa26.5■■□□□ 1.83
MSX2-201ENST00000239243 SYMPKQ92797 1274 aaKnown RBP26.5■■□□□ 1.83
MSX2-201ENST00000239243 PDGFDQ9GZP0 370 aaPredicted RBP26.5■■□□□ 1.83
MSX2-201ENST00000239243 VPS33BQ9H267 617 aa26.5■■□□□ 1.83
MSX2-201ENST00000239243 ENTPD3O75355 529 aa26.49■■□□□ 1.83
MSX2-201ENST00000239243 TCP10Q12799 353 aa26.49■■□□□ 1.83
MSX2-201ENST00000239243 GPATCH4Q5T3I0 446 aaKnown RBP26.49■■□□□ 1.83
MSX2-201ENST00000239243 ZSCAN29Q8IWY8 852 aaPredicted RBP26.49■■□□□ 1.83
MSX2-201ENST00000239243 ZFPM1Q8IX07 1006 aa26.49■■□□□ 1.83
MSX2-201ENST00000239243 PDILTQ8N807 584 aa26.49■■□□□ 1.83
MSX2-201ENST00000239243 PIGSQ96S52 555 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms