RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 KRBA2Q6ZNG9 492 aa18.3■□□□□ 0.52
ITGA4-201ENST00000233573 PLA2G4DQ86XP0 818 aa18.3■□□□□ 0.52
ITGA4-201ENST00000233573 GREB1LQ9C091 1923 aaPredicted RBP18.3■□□□□ 0.52
ITGA4-201ENST00000233573 IGKV6D-41A0A0C4DH26 115 aa18.29■□□□□ 0.52
ITGA4-201ENST00000233573 ZNF500O60304 480 aaPredicted RBP18.29■□□□□ 0.52
ITGA4-201ENST00000233573 ATP2B1P20020 1258 aa18.29■□□□□ 0.52
ITGA4-201ENST00000233573 DPCR1Q3MIW9 517 aa18.29■□□□□ 0.52
ITGA4-201ENST00000233573 LONRF3Q496Y0 759 aa18.29■□□□□ 0.52
ITGA4-201ENST00000233573 SPECC1Q5M775 1068 aa18.29■□□□□ 0.52
ITGA4-201ENST00000233573 TYW1BQ6NUM6 668 aa18.29■□□□□ 0.52
ITGA4-201ENST00000233573 RSBN1LQ6PCB5 846 aaPredicted RBP18.29■□□□□ 0.52
ITGA4-201ENST00000233573 CEP57L1Q8IYX8 460 aa18.29■□□□□ 0.52
ITGA4-201ENST00000233573 LZTS2Q9BRK4 669 aa18.29■□□□□ 0.52
ITGA4-201ENST00000233573 OSBPL5Q9H0X9 879 aaPredicted RBP18.29■□□□□ 0.52
ITGA4-201ENST00000233573 TAOK3Q9H2K8 898 aa18.29■□□□□ 0.52
ITGA4-201ENST00000233573 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.29■□□□□ 0.52
ITGA4-201ENST00000233573 M0R2N6 131 aa18.29■□□□□ 0.52
ITGA4-201ENST00000233573 TOP1P11387 765 aaKnown RBP18.29■□□□□ 0.52
ITGA4-201ENST00000233573 NLRP5P59047 1200 aa18.29■□□□□ 0.52
ITGA4-201ENST00000233573 TCP10Q12799 353 aa18.29■□□□□ 0.52
ITGA4-201ENST00000233573 CFAP100Q494V2 611 aa18.29■□□□□ 0.52
ITGA4-201ENST00000233573 SARM1Q6SZW1 724 aa18.29■□□□□ 0.52
ITGA4-201ENST00000233573 RASGRP2Q7LDG7 609 aa18.29■□□□□ 0.52
ITGA4-201ENST00000233573 METTL16Q86W50 562 aaKnown RBP18.29■□□□□ 0.52
ITGA4-201ENST00000233573 NIM1KQ8IY84 436 aa18.29■□□□□ 0.52
ITGA4-201ENST00000233573 PIBF1Q8WXW3 757 aa18.29■□□□□ 0.52
ITGA4-201ENST00000233573 BPIFA3Q9BQP9 254 aa18.29■□□□□ 0.52
ITGA4-201ENST00000233573 SPZ1Q9BXG8 430 aa18.29■□□□□ 0.52
ITGA4-201ENST00000233573 SERPINA10Q9UK55 444 aa18.29■□□□□ 0.52
ITGA4-201ENST00000233573 SIPA1L1O43166 1804 aa18.28■□□□□ 0.52
ITGA4-201ENST00000233573 MYO3BQ8WXR4 1341 aa18.28■□□□□ 0.52
ITGA4-201ENST00000233573 ZNF75DP51815 510 aa18.28■□□□□ 0.52
ITGA4-201ENST00000233573 NLRP12P59046 1061 aa18.28■□□□□ 0.52
ITGA4-201ENST00000233573 HDLBPQ00341 1268 aaKnown RBP18.28■□□□□ 0.52
ITGA4-201ENST00000233573 MDM2Q00987 491 aaPredicted RBP18.28■□□□□ 0.52
ITGA4-201ENST00000233573 GPKOWQ92917 476 aaPredicted RBP eCLIP18.28■□□□□ 0.52
ITGA4-201ENST00000233573 ZNRF3Q9ULT6 936 aa18.28■□□□□ 0.52
ITGA4-201ENST00000233573 BMP15O95972 392 aa18.27■□□□□ 0.52
ITGA4-201ENST00000233573 VIL1P09327 827 aaKnown RBP18.27■□□□□ 0.52
ITGA4-201ENST00000233573 CALML3P27482 149 aa18.27■□□□□ 0.52
ITGA4-201ENST00000233573 TRAPPC10P48553 1259 aa18.27■□□□□ 0.52
ITGA4-201ENST00000233573 PRMT6Q96LA8 375 aaPredicted RBP18.27■□□□□ 0.52
ITGA4-201ENST00000233573 CSRNP2Q9H175 543 aa18.27■□□□□ 0.52
ITGA4-201ENST00000233573 TDRD3Q9H7E2 651 aaKnown RBP18.27■□□□□ 0.52
ITGA4-201ENST00000233573 KLRF2D3W0D1 207 aa18.27■□□□□ 0.51
ITGA4-201ENST00000233573 GOLGA8HP0CJ92 632 aa18.27■□□□□ 0.51
ITGA4-201ENST00000233573 SMARCA1P28370 1054 aa18.27■□□□□ 0.51
ITGA4-201ENST00000233573 RASSF7Q02833 373 aa18.27■□□□□ 0.51
ITGA4-201ENST00000233573 TTC38Q5R3I4 469 aa18.27■□□□□ 0.51
ITGA4-201ENST00000233573 WWC2Q6AWC2 1192 aa18.27■□□□□ 0.51
ITGA4-201ENST00000233573 FOXP4Q8IVH2 680 aaPredicted RBP18.27■□□□□ 0.51
ITGA4-201ENST00000233573 FAM177A1Q8N128 213 aaPredicted RBP18.27■□□□□ 0.51
ITGA4-201ENST00000233573 NAT10Q9H0A0 1025 aaKnown RBP18.27■□□□□ 0.51
ITGA4-201ENST00000233573 MTMR4Q9NYA4 1195 aa18.27■□□□□ 0.51
ITGA4-201ENST00000233573 FAM13BQ9NYF5 915 aa18.27■□□□□ 0.51
ITGA4-201ENST00000233573 FAM198AQ9UFP1 575 aa18.27■□□□□ 0.51
ITGA4-201ENST00000233573 SERPINB13Q9UIV8 391 aa18.27■□□□□ 0.51
ITGA4-201ENST00000233573 PCDHA4Q9UN74 947 aa18.27■□□□□ 0.51
ITGA4-201ENST00000233573 AKR1B1P15121 316 aa18.26■□□□□ 0.51
ITGA4-201ENST00000233573 SHMT1P34896 483 aa18.26■□□□□ 0.51
ITGA4-201ENST00000233573 ATP2C1P98194 919 aaPredicted RBP18.26■□□□□ 0.51
ITGA4-201ENST00000233573 PNOCQ13519 176 aa18.26■□□□□ 0.51
ITGA4-201ENST00000233573 USP49Q70CQ1 688 aa18.26■□□□□ 0.51
ITGA4-201ENST00000233573 BLIDQ8IZY5 108 aa18.26■□□□□ 0.51
ITGA4-201ENST00000233573 DAGLBQ8NCG7 672 aa18.26■□□□□ 0.51
ITGA4-201ENST00000233573 GMLQ99445 158 aa18.26■□□□□ 0.51
ITGA4-201ENST00000233573 BARHL2Q9NY43 387 aa18.26■□□□□ 0.51
ITGA4-201ENST00000233573 SWAP70Q9UH65 585 aa18.26■□□□□ 0.51
ITGA4-201ENST00000233573 STXBP3O00186 592 aa18.26■□□□□ 0.51
ITGA4-201ENST00000233573 PARP1P09874 1014 aaKnown RBP18.26■□□□□ 0.51
ITGA4-201ENST00000233573 CXCL9Q07325 125 aa18.26■□□□□ 0.51
ITGA4-201ENST00000233573 PIK3AP1Q6ZUJ8 805 aa18.26■□□□□ 0.51
ITGA4-201ENST00000233573 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.26■□□□□ 0.51
ITGA4-201ENST00000233573 FERMT2Q96AC1 680 aa18.26■□□□□ 0.51
ITGA4-201ENST00000233573 GOLGA6L19H0YKK7 550 aa18.25■□□□□ 0.51
ITGA4-201ENST00000233573 BIN1O00499 593 aa18.25■□□□□ 0.51
ITGA4-201ENST00000233573 ZNF174Q15697 407 aa18.25■□□□□ 0.51
ITGA4-201ENST00000233573 USP17L2Q6R6M4 530 aa18.25■□□□□ 0.51
ITGA4-201ENST00000233573 CNNM3Q8NE01 707 aa18.25■□□□□ 0.51
ITGA4-201ENST00000233573 TRIM5Q9C035 493 aa18.25■□□□□ 0.51
ITGA4-201ENST00000233573 EHD4Q9H223 541 aa18.25■□□□□ 0.51
ITGA4-201ENST00000233573 VPS33BQ9H267 617 aa18.25■□□□□ 0.51
ITGA4-201ENST00000233573 MTMR7Q9Y216 660 aa18.25■□□□□ 0.51
ITGA4-201ENST00000233573 DDTLA6NHG4 134 aaPredicted RBP18.24■□□□□ 0.51
ITGA4-201ENST00000233573 FAM196BA6NMK8 535 aa18.24■□□□□ 0.51
ITGA4-201ENST00000233573 FOXN1O15353 648 aa18.24■□□□□ 0.51
ITGA4-201ENST00000233573 PRELPP51888 382 aa18.24■□□□□ 0.51
ITGA4-201ENST00000233573 GALNT17Q6IS24 598 aa18.24■□□□□ 0.51
ITGA4-201ENST00000233573 SH3BP5LQ7L8J4 393 aa18.24■□□□□ 0.51
ITGA4-201ENST00000233573 AOPEPQ8N6M6 819 aa18.24■□□□□ 0.51
ITGA4-201ENST00000233573 ZNF830Q96NB3 372 aaPredicted RBP18.24■□□□□ 0.51
ITGA4-201ENST00000233573 CPVLQ9H3G5 476 aa18.24■□□□□ 0.51
ITGA4-201ENST00000233573 BECN2A8MW95 431 aa18.24■□□□□ 0.51
ITGA4-201ENST00000233573 POLR2DO15514 142 aaKnown RBP18.24■□□□□ 0.51
ITGA4-201ENST00000233573 ACTN4O43707 911 aaKnown RBP18.24■□□□□ 0.51
ITGA4-201ENST00000233573 SNHG28P0DPA3 235 aa18.24■□□□□ 0.51
ITGA4-201ENST00000233573 CDC25BP30305 580 aa18.24■□□□□ 0.51
ITGA4-201ENST00000233573 IDI2Q9BXS1 227 aa18.24■□□□□ 0.51
ITGA4-201ENST00000233573 SHTN1A0MZ66 631 aa18.23■□□□□ 0.51
ITGA4-201ENST00000233573 USP17L5A8MUK1 530 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms