RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 CCDC117Q8IWD4 279 aaPredicted RBP8.98□□□□□ -0.97
NANOG-201ENST00000229307 SPAG5Q96R06 1193 aa8.98□□□□□ -0.97
NANOG-201ENST00000229307 VPS33BQ9H267 617 aa8.98□□□□□ -0.97
NANOG-201ENST00000229307 FEM1BQ9UK73 627 aa8.98□□□□□ -0.97
NANOG-201ENST00000229307 PALM3A6NDB9 673 aaPredicted RBP8.97□□□□□ -0.97
NANOG-201ENST00000229307 FOXO4P98177 505 aa8.97□□□□□ -0.97
NANOG-201ENST00000229307 KRT40Q6A162 431 aa8.97□□□□□ -0.97
NANOG-201ENST00000229307 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.97□□□□□ -0.97
NANOG-201ENST00000229307 FHDC1Q9C0D6 1143 aaPredicted RBP8.97□□□□□ -0.97
NANOG-201ENST00000229307 RFX7Q2KHR2 1363 aa8.97□□□□□ -0.97
NANOG-201ENST00000229307 M0R2C6 588 aa8.97□□□□□ -0.97
NANOG-201ENST00000229307 NEMFO60524 1076 aa8.97□□□□□ -0.97
NANOG-201ENST00000229307 CUTAO60888 179 aa8.97□□□□□ -0.97
NANOG-201ENST00000229307 WDR44Q5JSH3 913 aa8.97□□□□□ -0.97
NANOG-201ENST00000229307 SPOUT1Q5T280 376 aaKnown RBP8.97□□□□□ -0.97
NANOG-201ENST00000229307 ANO1Q5XXA6 986 aa8.97□□□□□ -0.97
NANOG-201ENST00000229307 ZNF710Q8N1W2 664 aa8.97□□□□□ -0.97
NANOG-201ENST00000229307 MMRN2Q9H8L6 949 aa8.97□□□□□ -0.97
NANOG-201ENST00000229307 ZHX2Q9Y6X8 837 aa8.97□□□□□ -0.97
NANOG-201ENST00000229307 PXDNLA1KZ92 1463 aa8.97□□□□□ -0.97
NANOG-201ENST00000229307 USP17L10C9JJH3 530 aa8.97□□□□□ -0.97
NANOG-201ENST00000229307 N4BP3O15049 544 aa8.97□□□□□ -0.97
NANOG-201ENST00000229307 EPB41P11171 864 aaKnown RBP8.97□□□□□ -0.97
NANOG-201ENST00000229307 ECE1P42892 770 aa8.97□□□□□ -0.97
NANOG-201ENST00000229307 MCAMP43121 646 aa8.97□□□□□ -0.97
NANOG-201ENST00000229307 SNX16P57768 344 aa8.97□□□□□ -0.97
NANOG-201ENST00000229307 C8orf34Q49A92 452 aa8.97□□□□□ -0.97
NANOG-201ENST00000229307 FILIP1Q7Z7B0 1213 aa8.97□□□□□ -0.97
NANOG-201ENST00000229307 PLA2G4DQ86XP0 818 aa8.97□□□□□ -0.97
NANOG-201ENST00000229307 SEC62Q99442 399 aaKnown RBP8.97□□□□□ -0.97
NANOG-201ENST00000229307 MKRN3Q13064 507 aaKnown RBP8.97□□□□□ -0.97
NANOG-201ENST00000229307 SPICE1Q8N0Z3 855 aa8.97□□□□□ -0.97
NANOG-201ENST00000229307 SH3RF3Q8TEJ3 882 aaPredicted RBP8.97□□□□□ -0.97
NANOG-201ENST00000229307 GINS2Q9Y248 185 aa8.97□□□□□ -0.97
NANOG-201ENST00000229307 RGPD8O14715 1765 aaPredicted RBP8.97□□□□□ -0.97
NANOG-201ENST00000229307 RGPD1P0DJD0 1748 aa8.96□□□□□ -0.97
NANOG-201ENST00000229307 RABL6Q3YEC7 729 aaPredicted RBP8.96□□□□□ -0.97
NANOG-201ENST00000229307 EPHA10Q5JZY3 1008 aa8.96□□□□□ -0.97
NANOG-201ENST00000229307 RBM46Q8TBY0 533 aaKnown RBP8.96□□□□□ -0.97
NANOG-201ENST00000229307 KIF20BQ96Q89 1820 aa8.96□□□□□ -0.97
NANOG-201ENST00000229307 ENTPD3O75355 529 aa8.96□□□□□ -0.97
NANOG-201ENST00000229307 SREBF2Q12772 1141 aa8.96□□□□□ -0.97
NANOG-201ENST00000229307 TFDP1Q14186 410 aa8.96□□□□□ -0.97
NANOG-201ENST00000229307 NEK8Q86SG6 692 aa8.96□□□□□ -0.97
NANOG-201ENST00000229307 DEPTORQ8TB45 409 aa8.96□□□□□ -0.97
NANOG-201ENST00000229307 FAM84BQ96KN1 310 aaPredicted RBP8.96□□□□□ -0.97
NANOG-201ENST00000229307 SLF1Q9BQI6 1058 aa8.96□□□□□ -0.97
NANOG-201ENST00000229307 NCOA5Q9HCD5 579 aaKnown RBP8.96□□□□□ -0.97
NANOG-201ENST00000229307 ZNF215Q9UL58 517 aaPredicted RBP8.96□□□□□ -0.97
NANOG-201ENST00000229307 ALS2Q96Q42 1657 aa8.96□□□□□ -0.98
NANOG-201ENST00000229307 GSDMDP57764 484 aa8.96□□□□□ -0.98
NANOG-201ENST00000229307 ODR4Q5SWX8 454 aa8.96□□□□□ -0.98
NANOG-201ENST00000229307 HHIPL2Q6UWX4 724 aa8.96□□□□□ -0.98
NANOG-201ENST00000229307 DGKHQ86XP1 1220 aa8.96□□□□□ -0.98
NANOG-201ENST00000229307 MAP4K1Q92918 833 aa8.96□□□□□ -0.98
NANOG-201ENST00000229307 ATP6V0A1Q93050 837 aa8.96□□□□□ -0.98
NANOG-201ENST00000229307 PHKBQ93100 1093 aa8.96□□□□□ -0.98
NANOG-201ENST00000229307 ANTXR1Q9H6X2 564 aa8.96□□□□□ -0.98
NANOG-201ENST00000229307 STX10O60499 249 aa8.96□□□□□ -0.98
NANOG-201ENST00000229307 GH2P01242 217 aa8.96□□□□□ -0.98
NANOG-201ENST00000229307 CSF1RP07333 972 aa8.96□□□□□ -0.98
NANOG-201ENST00000229307 CPA1P15085 419 aa8.96□□□□□ -0.98
NANOG-201ENST00000229307 TRPC3Q13507 836 aa8.96□□□□□ -0.98
NANOG-201ENST00000229307 SLC17A8Q8NDX2 589 aa8.96□□□□□ -0.98
NANOG-201ENST00000229307 VPS54Q9P1Q0 977 aa8.96□□□□□ -0.98
NANOG-201ENST00000229307 MRVI1Q9Y6F6 885 aa8.96□□□□□ -0.98
NANOG-201ENST00000229307 BCL9O00512 1426 aa8.95□□□□□ -0.98
NANOG-201ENST00000229307 PFKFB2O60825 505 aa8.95□□□□□ -0.98
NANOG-201ENST00000229307 DNM1Q05193 864 aaKnown RBP8.95□□□□□ -0.98
NANOG-201ENST00000229307 SLC10A5Q5PT55 438 aa8.95□□□□□ -0.98
NANOG-201ENST00000229307 MIS18BP1Q6P0N0 1132 aa8.95□□□□□ -0.98
NANOG-201ENST00000229307 LRSAM1Q6UWE0 723 aa8.95□□□□□ -0.98
NANOG-201ENST00000229307 GTF3C6Q969F1 213 aa8.95□□□□□ -0.98
NANOG-201ENST00000229307 GINM1Q9NU53 330 aa8.95□□□□□ -0.98
NANOG-201ENST00000229307 UTYO14607 1347 aa8.95□□□□□ -0.98
NANOG-201ENST00000229307 GOLGA8HP0CJ92 632 aa8.95□□□□□ -0.98
NANOG-201ENST00000229307 GCFC2P16383 781 aaKnown RBP8.95□□□□□ -0.98
NANOG-201ENST00000229307 PRR16Q569H4 304 aa8.95□□□□□ -0.98
NANOG-201ENST00000229307 C9orf131Q5VYM1 1079 aa8.95□□□□□ -0.98
NANOG-201ENST00000229307 MFSD14CQ5VZR4 134 aa8.95□□□□□ -0.98
NANOG-201ENST00000229307 RETREG2Q8NC44 543 aa8.95□□□□□ -0.98
NANOG-201ENST00000229307 GDPD2Q9HCC8 539 aa8.95□□□□□ -0.98
NANOG-201ENST00000229307 ZHX1Q9UKY1 873 aaPredicted RBP8.95□□□□□ -0.98
NANOG-201ENST00000229307 KIF2AO00139 706 aaPredicted RBP8.95□□□□□ -0.98
NANOG-201ENST00000229307 PRDX5P30044 214 aa8.95□□□□□ -0.98
NANOG-201ENST00000229307 ABCD1P33897 745 aa8.95□□□□□ -0.98
NANOG-201ENST00000229307 GMPSP49915 693 aaPredicted RBP8.95□□□□□ -0.98
NANOG-201ENST00000229307 ALS2CR12Q96Q35 445 aa8.95□□□□□ -0.98
NANOG-201ENST00000229307 ADPGKQ9BRR6 497 aa8.95□□□□□ -0.98
NANOG-201ENST00000229307 PLVAPQ9BX97 442 aa8.95□□□□□ -0.98
NANOG-201ENST00000229307 RNF26Q9BY78 433 aaPredicted RBP8.95□□□□□ -0.98
NANOG-201ENST00000229307 MARF1Q9Y4F3 1742 aaKnown RBP8.95□□□□□ -0.98
NANOG-201ENST00000229307 PHRF1Q9P1Y6 1649 aaKnown RBP8.95□□□□□ -0.98
NANOG-201ENST00000229307 CTNNA2P26232 953 aa8.95□□□□□ -0.98
NANOG-201ENST00000229307 CABP7Q86V35 215 aa8.95□□□□□ -0.98
NANOG-201ENST00000229307 METTL13Q8N6R0 699 aa8.95□□□□□ -0.98
NANOG-201ENST00000229307 GIMAP8Q8ND71 665 aaPredicted RBP8.95□□□□□ -0.98
NANOG-201ENST00000229307 ZSWIM6Q9HCJ5 1215 aa8.95□□□□□ -0.98
NANOG-201ENST00000229307 RNF216Q9NWF9 866 aaPredicted RBP8.95□□□□□ -0.98
NANOG-201ENST00000229307 DDX25Q9UHL0 483 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms