RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 SMARCC1Q92922 1105 aaPredicted RBP18.43■□□□□ 0.54
LTBR-201ENST00000228918 CCDC51Q96ER9 411 aa18.43■□□□□ 0.54
LTBR-201ENST00000228918 IRX2Q9BZI1 471 aaPredicted RBP18.43■□□□□ 0.54
LTBR-201ENST00000228918 EPC1Q9H2F5 836 aa18.43■□□□□ 0.54
LTBR-201ENST00000228918 LIMA1Q9UHB6 759 aaKnown RBP18.43■□□□□ 0.54
LTBR-201ENST00000228918 ADAMTS3O15072 1205 aa18.42■□□□□ 0.54
LTBR-201ENST00000228918 ADAMTS2O95450 1211 aa18.42■□□□□ 0.54
LTBR-201ENST00000228918 VEGFAP15692 232 aaPredicted RBP18.42■□□□□ 0.54
LTBR-201ENST00000228918 MCM7P33993 719 aa18.42■□□□□ 0.54
LTBR-201ENST00000228918 SBK1Q52WX2 424 aa18.42■□□□□ 0.54
LTBR-201ENST00000228918 TEX35Q5T0J7 233 aa18.42■□□□□ 0.54
LTBR-201ENST00000228918 RASGRP2Q7LDG7 609 aa18.42■□□□□ 0.54
LTBR-201ENST00000228918 RWDD2AQ9UIY3 292 aa18.42■□□□□ 0.54
LTBR-201ENST00000228918 SEC31AO94979 1220 aaKnown RBP18.42■□□□□ 0.54
LTBR-201ENST00000228918 FAM193AP78312 1265 aa18.42■□□□□ 0.54
LTBR-201ENST00000228918 KRT31Q15323 416 aa18.42■□□□□ 0.54
LTBR-201ENST00000228918 SLC10A5Q5PT55 438 aa18.42■□□□□ 0.54
LTBR-201ENST00000228918 RRAGBQ5VZM2 374 aa18.42■□□□□ 0.54
LTBR-201ENST00000228918 LZTFL1Q9NQ48 299 aa18.42■□□□□ 0.54
LTBR-201ENST00000228918 ATP8B1O43520 1251 aa18.41■□□□□ 0.54
LTBR-201ENST00000228918 PRDX5P30044 214 aa18.41■□□□□ 0.54
LTBR-201ENST00000228918 FXR1P51114 621 aaKnown RBP eCLIP18.41■□□□□ 0.54
LTBR-201ENST00000228918 ARL6IP4Q66PJ3 421 aaKnown RBP18.41■□□□□ 0.54
LTBR-201ENST00000228918 RCSD1Q6JBY9 416 aa18.41■□□□□ 0.54
LTBR-201ENST00000228918 LINC00116Q8NCU8 138 aa18.41■□□□□ 0.54
LTBR-201ENST00000228918 RABGGTAQ92696 567 aa18.41■□□□□ 0.54
LTBR-201ENST00000228918 A0A0U1RQJ8 604 aa18.4■□□□□ 0.54
LTBR-201ENST00000228918 LRRC10BA6NIK2 292 aa18.4■□□□□ 0.54
LTBR-201ENST00000228918 CCT6AP40227 531 aaKnown RBP18.4■□□□□ 0.54
LTBR-201ENST00000228918 PAK1Q13153 545 aa18.4■□□□□ 0.54
LTBR-201ENST00000228918 CC2D1AQ6P1N0 951 aaPredicted RBP18.4■□□□□ 0.54
LTBR-201ENST00000228918 CREBRFQ8IUR6 639 aa18.4■□□□□ 0.54
LTBR-201ENST00000228918 ATRIPQ8WXE1 791 aa18.4■□□□□ 0.54
LTBR-201ENST00000228918 GOLGA1Q92805 767 aa18.4■□□□□ 0.54
LTBR-201ENST00000228918 TSPY2A6NKD2 308 aa18.4■□□□□ 0.54
LTBR-201ENST00000228918 COBLO75128 1261 aa18.4■□□□□ 0.54
LTBR-201ENST00000228918 CALML3P27482 149 aa18.4■□□□□ 0.54
LTBR-201ENST00000228918 HIBADHP31937 336 aaKnown RBP18.4■□□□□ 0.54
LTBR-201ENST00000228918 KIF5BP33176 963 aa18.4■□□□□ 0.54
LTBR-201ENST00000228918 SPAG1Q07617 926 aa18.4■□□□□ 0.54
LTBR-201ENST00000228918 ZNF658Q5TYW1 1059 aaPredicted RBP18.4■□□□□ 0.54
LTBR-201ENST00000228918 C4orf32Q8N8J7 132 aa18.4■□□□□ 0.54
LTBR-201ENST00000228918 FAM205AQ6ZU69 1335 aa18.4■□□□□ 0.54
LTBR-201ENST00000228918 KCNQ2O43526 872 aa18.39■□□□□ 0.54
LTBR-201ENST00000228918 KIF5CO60282 957 aa18.39■□□□□ 0.54
LTBR-201ENST00000228918 LONP1P36776 959 aaKnown RBP18.39■□□□□ 0.54
LTBR-201ENST00000228918 BICDL1Q6ZP65 573 aa18.39■□□□□ 0.54
LTBR-201ENST00000228918 TFCP2L1Q9NZI6 479 aa18.39■□□□□ 0.54
LTBR-201ENST00000228918 COL24A1Q17RW2 1714 aa18.39■□□□□ 0.53
LTBR-201ENST00000228918 N4BP3O15049 544 aa18.39■□□□□ 0.53
LTBR-201ENST00000228918 TBC1D8O95759 1140 aa18.39■□□□□ 0.53
LTBR-201ENST00000228918 COPB1P53618 953 aaKnown RBP18.39■□□□□ 0.53
LTBR-201ENST00000228918 RPS8P62241 208 aaKnown RBP18.39■□□□□ 0.53
LTBR-201ENST00000228918 TBC1D9BQ66K14 1250 aa18.39■□□□□ 0.53
LTBR-201ENST00000228918 BLIDQ8IZY5 108 aa18.39■□□□□ 0.53
LTBR-201ENST00000228918 RMND1Q9NWS8 449 aa18.39■□□□□ 0.53
LTBR-201ENST00000228918 RPN1P04843 607 aaKnown RBP18.38■□□□□ 0.53
LTBR-201ENST00000228918 NELFBQ8WX92 580 aa18.38■□□□□ 0.53
LTBR-201ENST00000228918 SH3GLB2Q9NR46 395 aa18.38■□□□□ 0.53
LTBR-201ENST00000228918 SPATA31A5Q5VU36 1347 aa18.38■□□□□ 0.53
LTBR-201ENST00000228918 SPATA31A7Q8IWB4 1347 aa18.38■□□□□ 0.53
LTBR-201ENST00000228918 RGL2O15211 777 aa18.38■□□□□ 0.53
LTBR-201ENST00000228918 TCP11X2Q5H9J9 407 aa18.38■□□□□ 0.53
LTBR-201ENST00000228918 TMED8Q6PL24 325 aaPredicted RBP18.38■□□□□ 0.53
LTBR-201ENST00000228918 TMTC1Q8IUR5 882 aa18.38■□□□□ 0.53
LTBR-201ENST00000228918 PARD6BQ9BYG5 372 aa18.38■□□□□ 0.53
LTBR-201ENST00000228918 UBXN6Q9BZV1 441 aa18.38■□□□□ 0.53
LTBR-201ENST00000228918 ABHD10Q9NUJ1 306 aa18.38■□□□□ 0.53
LTBR-201ENST00000228918 PCDHA4Q9UN74 947 aa18.38■□□□□ 0.53
LTBR-201ENST00000228918 TTF2Q9UNY4 1162 aaKnown RBP18.38■□□□□ 0.53
LTBR-201ENST00000228918 KCNJ18B7U540 433 aa18.37■□□□□ 0.53
LTBR-201ENST00000228918 SASH3O75995 380 aa18.37■□□□□ 0.53
LTBR-201ENST00000228918 TXLNAP40222 546 aa18.37■□□□□ 0.53
LTBR-201ENST00000228918 ERVK-24P63145 666 aa18.37■□□□□ 0.53
LTBR-201ENST00000228918 TRIM14Q14142 442 aa18.37■□□□□ 0.53
LTBR-201ENST00000228918 KCNJ12Q14500 433 aa18.37■□□□□ 0.53
LTBR-201ENST00000228918 SRGAP1Q7Z6B7 1085 aa18.37■□□□□ 0.53
LTBR-201ENST00000228918 GPKOWQ92917 476 aaPredicted RBP eCLIP18.37■□□□□ 0.53
LTBR-201ENST00000228918 ANKRD2Q9GZV1 360 aa18.37■□□□□ 0.53
LTBR-201ENST00000228918 VPS16Q9H269 839 aa18.37■□□□□ 0.53
LTBR-201ENST00000228918 KAT14Q9H8E8 782 aa18.37■□□□□ 0.53
LTBR-201ENST00000228918 TAB2Q9NYJ8 693 aa18.37■□□□□ 0.53
LTBR-201ENST00000228918 ACRBPQ8NEB7 543 aa18.37■□□□□ 0.53
LTBR-201ENST00000228918 ANKRD20A12PQ8NF67 263 aa18.37■□□□□ 0.53
LTBR-201ENST00000228918 MCM9Q9NXL9 1143 aa18.37■□□□□ 0.53
LTBR-201ENST00000228918 CDC23Q9UJX2 597 aa18.37■□□□□ 0.53
LTBR-201ENST00000228918 GDAQ9Y2T3 454 aa18.37■□□□□ 0.53
LTBR-201ENST00000228918 USP17L8P0C7I0 530 aa18.36■□□□□ 0.53
LTBR-201ENST00000228918 STAT6P42226 847 aa18.36■□□□□ 0.53
LTBR-201ENST00000228918 CHMP4BP1P59074 171 aa18.36■□□□□ 0.53
LTBR-201ENST00000228918 ZNF569Q5MCW4 686 aa18.36■□□□□ 0.53
LTBR-201ENST00000228918 DISC1Q9NRI5 854 aa18.36■□□□□ 0.53
LTBR-201ENST00000228918 CNTNAP4Q9C0A0 1308 aa18.36■□□□□ 0.53
LTBR-201ENST00000228918 CCDC66A2RUB6 948 aa18.35■□□□□ 0.53
LTBR-201ENST00000228918 RNF225M0QZC1 329 aaPredicted RBP18.35■□□□□ 0.53
LTBR-201ENST00000228918 M0R2N6 131 aa18.35■□□□□ 0.53
LTBR-201ENST00000228918 CDC25AP30304 524 aa18.35■□□□□ 0.53
LTBR-201ENST00000228918 PRCPP42785 496 aa18.35■□□□□ 0.53
LTBR-201ENST00000228918 JAKMIP3Q5VZ66 844 aa18.35■□□□□ 0.53
LTBR-201ENST00000228918 DGKHQ86XP1 1220 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms