RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 TAF6LQ9Y6J9 622 aa14.98□□□□□ -0.01
LSM5-201ENST00000223084 MYPNQ86TC9 1320 aa14.97□□□□□ -0.01
LSM5-201ENST00000223084 PARP14Q460N5 1801 aa14.97□□□□□ -0.01
LSM5-201ENST00000223084 PDE4DIPQ5VU43 2346 aa14.97□□□□□ -0.01
LSM5-201ENST00000223084 KDM4AO75164 1064 aa14.97□□□□□ -0.01
LSM5-201ENST00000223084 CDC45O75419 566 aa14.97□□□□□ -0.01
LSM5-201ENST00000223084 GNRH1P01148 92 aa14.97□□□□□ -0.01
LSM5-201ENST00000223084 CYP21A2P08686 494 aa14.97□□□□□ -0.01
LSM5-201ENST00000223084 SLFN13Q68D06 897 aa14.97□□□□□ -0.01
LSM5-201ENST00000223084 LBX2Q6XYB7 198 aa14.97□□□□□ -0.01
LSM5-201ENST00000223084 KIAA1211Q6ZU35 1233 aa14.97□□□□□ -0.01
LSM5-201ENST00000223084 RASGRP2Q7LDG7 609 aa14.97□□□□□ -0.01
LSM5-201ENST00000223084 GMCL1P1Q8NEA9 526 aa14.97□□□□□ -0.01
LSM5-201ENST00000223084 ESR2Q92731 530 aa14.97□□□□□ -0.01
LSM5-201ENST00000223084 MAP4K1Q92918 833 aa14.97□□□□□ -0.01
LSM5-201ENST00000223084 LSG1Q9H089 658 aaKnown RBP14.97□□□□□ -0.01
LSM5-201ENST00000223084 PORCNQ9H237 461 aa14.97□□□□□ -0.01
LSM5-201ENST00000223084 U3KPZ7 1027 aaPredicted RBP14.97□□□□□ -0.01
LSM5-201ENST00000223084 MCCP23508 829 aa14.96□□□□□ -0.01
LSM5-201ENST00000223084 NOVP48745 357 aa14.96□□□□□ -0.01
LSM5-201ENST00000223084 COA7Q96BR5 231 aa14.96□□□□□ -0.01
LSM5-201ENST00000223084 TMEM47Q9BQJ4 181 aa14.96□□□□□ -0.01
LSM5-201ENST00000223084 TCP11L1Q9NUJ3 509 aa14.96□□□□□ -0.01
LSM5-201ENST00000223084 ISY1Q9ULR0 285 aaKnown RBP14.96□□□□□ -0.01
LSM5-201ENST00000223084 RBM8AQ9Y5S9 174 aaKnown RBP14.96□□□□□ -0.01
LSM5-201ENST00000223084 HTTP42858 3142 aa14.96□□□□□ -0.02
LSM5-201ENST00000223084 COL11A1P12107 1806 aaPredicted RBP14.95□□□□□ -0.02
LSM5-201ENST00000223084 FLT3LGP49771 235 aa14.95□□□□□ -0.02
LSM5-201ENST00000223084 PRMT2P55345 433 aa14.95□□□□□ -0.02
LSM5-201ENST00000223084 PLS1Q14651 629 aa14.95□□□□□ -0.02
LSM5-201ENST00000223084 PPP4R3BQ5MIZ7 849 aa14.95□□□□□ -0.02
LSM5-201ENST00000223084 RCSD1Q6JBY9 416 aa14.95□□□□□ -0.02
LSM5-201ENST00000223084 RAET1EQ8TD07 263 aa14.95□□□□□ -0.02
LSM5-201ENST00000223084 SH3TC2Q8TF17 1288 aa14.95□□□□□ -0.02
LSM5-201ENST00000223084 ANO2Q9NQ90 1003 aa14.95□□□□□ -0.02
LSM5-201ENST00000223084 ZSWIM5Q9P217 1185 aa14.95□□□□□ -0.02
LSM5-201ENST00000223084 PPP1R9AQ9ULJ8 1098 aa14.95□□□□□ -0.02
LSM5-201ENST00000223084 SYNPO2Q9UMS6 1093 aa14.95□□□□□ -0.02
LSM5-201ENST00000223084 BMP3P12645 472 aa14.94□□□□□ -0.02
LSM5-201ENST00000223084 MAPK4P31152 587 aa14.94□□□□□ -0.02
LSM5-201ENST00000223084 SLC9C1Q4G0N8 1177 aa14.94□□□□□ -0.02
LSM5-201ENST00000223084 WDR78Q5VTH9 848 aa14.94□□□□□ -0.02
LSM5-201ENST00000223084 STOX1Q6ZVD7 989 aa14.94□□□□□ -0.02
LSM5-201ENST00000223084 CCAR1Q8IX12 1150 aaKnown RBP14.94□□□□□ -0.02
LSM5-201ENST00000223084 SLF1Q9BQI6 1058 aa14.94□□□□□ -0.02
LSM5-201ENST00000223084 MOV10L1Q9BXT6 1211 aaKnown RBP14.94□□□□□ -0.02
LSM5-201ENST00000223084 KRT23Q9C075 422 aa14.94□□□□□ -0.02
LSM5-201ENST00000223084 GJD2Q9UKL4 321 aa14.94□□□□□ -0.02
LSM5-201ENST00000223084 ADAMTS5Q9UNA0 930 aa14.94□□□□□ -0.02
LSM5-201ENST00000223084 A0A0G2JMZ2 1700 aa14.93□□□□□ -0.02
LSM5-201ENST00000223084 TMEM232C9JQI7 657 aa14.93□□□□□ -0.02
LSM5-201ENST00000223084 VWA5AO00534 786 aa14.93□□□□□ -0.02
LSM5-201ENST00000223084 MYCP01106 439 aaPredicted RBP14.93□□□□□ -0.02
LSM5-201ENST00000223084 TOP1P11387 765 aaKnown RBP14.93□□□□□ -0.02
LSM5-201ENST00000223084 SLC1A4P43007 532 aa14.93□□□□□ -0.02
LSM5-201ENST00000223084 RGS19P49795 217 aa14.93□□□□□ -0.02
LSM5-201ENST00000223084 CCNA1P78396 465 aa14.93□□□□□ -0.02
LSM5-201ENST00000223084 TMEM132BQ14DG7 1078 aa14.93□□□□□ -0.02
LSM5-201ENST00000223084 CASC1Q6TDU7 716 aa14.93□□□□□ -0.02
LSM5-201ENST00000223084 KCTD1Q719H9 257 aa14.93□□□□□ -0.02
LSM5-201ENST00000223084 CYB5R4Q7L1T6 521 aa14.93□□□□□ -0.02
LSM5-201ENST00000223084 GPR142Q7Z601 462 aa14.93□□□□□ -0.02
LSM5-201ENST00000223084 PLEKHH3Q7Z736 793 aa14.93□□□□□ -0.02
LSM5-201ENST00000223084 MB21D1Q8N884 522 aa14.93□□□□□ -0.02
LSM5-201ENST00000223084 KIFC2Q96AC6 838 aa14.93□□□□□ -0.02
LSM5-201ENST00000223084 GMCL1Q96IK5 515 aa14.93□□□□□ -0.02
LSM5-201ENST00000223084 SPATC1LQ9H0A9 340 aa14.93□□□□□ -0.02
LSM5-201ENST00000223084 CNNM2Q9H8M5 875 aa14.93□□□□□ -0.02
LSM5-201ENST00000223084 FEM1BQ9UK73 627 aa14.93□□□□□ -0.02
LSM5-201ENST00000223084 PLXNB2O15031 1838 aa14.93□□□□□ -0.02
LSM5-201ENST00000223084 KIAA0100Q14667 2235 aaKnown RBP14.93□□□□□ -0.02
LSM5-201ENST00000223084 E7EWF7 191 aa14.92□□□□□ -0.02
LSM5-201ENST00000223084 ELNP15502 786 aa14.92□□□□□ -0.02
LSM5-201ENST00000223084 GRK4P32298 578 aa14.92□□□□□ -0.02
LSM5-201ENST00000223084 SOX10P56693 466 aa14.92□□□□□ -0.02
LSM5-201ENST00000223084 CCDC96Q2M329 555 aa14.92□□□□□ -0.02
LSM5-201ENST00000223084 IQCA1Q86XH1 822 aa14.92□□□□□ -0.02
LSM5-201ENST00000223084 REPS2Q8NFH8 660 aa14.92□□□□□ -0.02
LSM5-201ENST00000223084 ARMC5Q96C12 935 aa14.92□□□□□ -0.02
LSM5-201ENST00000223084 TTC14Q96N46 770 aa14.92□□□□□ -0.02
LSM5-201ENST00000223084 ZSCAN10Q96SZ4 725 aaPredicted RBP14.92□□□□□ -0.02
LSM5-201ENST00000223084 CWC22Q9HCG8 908 aaKnown RBP14.92□□□□□ -0.02
LSM5-201ENST00000223084 FRMPD2Q68DX3 1309 aaPredicted RBP14.92□□□□□ -0.02
LSM5-201ENST00000223084 SLC27A2O14975 620 aa14.91□□□□□ -0.02
LSM5-201ENST00000223084 ADCY3O60266 1144 aa14.91□□□□□ -0.02
LSM5-201ENST00000223084 ERCC3P19447 782 aa14.91□□□□□ -0.02
LSM5-201ENST00000223084 CYP2B6P20813 491 aa14.91□□□□□ -0.02
LSM5-201ENST00000223084 TRDNQ13061 729 aa14.91□□□□□ -0.02
LSM5-201ENST00000223084 IKQ13123 557 aaPredicted RBP14.91□□□□□ -0.02
LSM5-201ENST00000223084 CREB3L3Q68CJ9 461 aa14.91□□□□□ -0.02
LSM5-201ENST00000223084 TTBK2Q6IQ55 1244 aa14.91□□□□□ -0.02
LSM5-201ENST00000223084 CHST3Q7LGC8 479 aa14.91□□□□□ -0.02
LSM5-201ENST00000223084 DGKHQ86XP1 1220 aa14.91□□□□□ -0.02
LSM5-201ENST00000223084 ENAHQ8N8S7 591 aaPredicted RBP14.91□□□□□ -0.02
LSM5-201ENST00000223084 PRPF38AQ8NAV1 312 aaKnown RBP14.91□□□□□ -0.02
LSM5-201ENST00000223084 DCAF4Q8WV16 495 aa14.91□□□□□ -0.02
LSM5-201ENST00000223084 ZNF333Q96JL9 665 aa14.91□□□□□ -0.02
LSM5-201ENST00000223084 NUDT12Q9BQG2 462 aa14.91□□□□□ -0.02
LSM5-201ENST00000223084 GPCPD1Q9NPB8 672 aa14.91□□□□□ -0.02
LSM5-201ENST00000223084 TNKSO95271 1327 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 434.2 ms