RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 NMT2O60551 498 aa23.86■■□□□ 1.41
CCDC130-201ENST00000221554 ADRA2BP18089 450 aa23.86■■□□□ 1.41
CCDC130-201ENST00000221554 AFMP43652 599 aa23.86■■□□□ 1.41
CCDC130-201ENST00000221554 CCDC93Q567U6 631 aa23.86■■□□□ 1.41
CCDC130-201ENST00000221554 DAGLBQ8NCG7 672 aa23.86■■□□□ 1.41
CCDC130-201ENST00000221554 ZNF397Q8NF99 534 aaPredicted RBP23.86■■□□□ 1.41
CCDC130-201ENST00000221554 PANX2Q96RD6 677 aa23.86■■□□□ 1.41
CCDC130-201ENST00000221554 USP17L8P0C7I0 530 aa23.86■■□□□ 1.41
CCDC130-201ENST00000221554 TMEM139Q8IV31 216 aa23.86■■□□□ 1.41
CCDC130-201ENST00000221554 LAD1O00515 517 aa23.85■■□□□ 1.41
CCDC130-201ENST00000221554 PLCG2P16885 1265 aa23.85■■□□□ 1.41
CCDC130-201ENST00000221554 SPAG1Q07617 926 aa23.85■■□□□ 1.41
CCDC130-201ENST00000221554 E2F4Q16254 413 aa23.85■■□□□ 1.41
CCDC130-201ENST00000221554 ZNF827Q17R98 1081 aa23.85■■□□□ 1.41
CCDC130-201ENST00000221554 TXNRD3Q86VQ6 643 aa23.85■■□□□ 1.41
CCDC130-201ENST00000221554 REXO1L1PQ8IX06 675 aa23.85■■□□□ 1.41
CCDC130-201ENST00000221554 SAMSN1Q9NSI8 373 aaKnown RBP23.85■■□□□ 1.41
CCDC130-201ENST00000221554 OGFRQ9NZT2 677 aa23.85■■□□□ 1.41
CCDC130-201ENST00000221554 MYL1P05976 194 aa23.84■■□□□ 1.41
CCDC130-201ENST00000221554 CDKAL1Q5VV42 579 aa23.84■■□□□ 1.41
CCDC130-201ENST00000221554 SLF2Q8IX21 1173 aa23.84■■□□□ 1.41
CCDC130-201ENST00000221554 TRMT44Q8IYL2 757 aaKnown RBP23.84■■□□□ 1.41
CCDC130-201ENST00000221554 TC2NQ8N9U0 490 aa23.84■■□□□ 1.41
CCDC130-201ENST00000221554 PPP2R2CQ9Y2T4 447 aa23.84■■□□□ 1.41
CCDC130-201ENST00000221554 AKR1B15C9JRZ8 316 aaPredicted RBP23.83■■□□□ 1.41
CCDC130-201ENST00000221554 TSPY3P0CV98 308 aa23.83■■□□□ 1.41
CCDC130-201ENST00000221554 TSPY8P0CW00 308 aa23.83■■□□□ 1.41
CCDC130-201ENST00000221554 PPFIBP1Q86W92 1011 aa23.83■■□□□ 1.41
CCDC130-201ENST00000221554 CNBD1Q8NA66 436 aa23.83■■□□□ 1.41
CCDC130-201ENST00000221554 LY75O60449 1722 aa23.83■■□□□ 1.41
CCDC130-201ENST00000221554 PPP1R3GB7ZBB8 358 aa23.83■■□□□ 1.4
CCDC130-201ENST00000221554 ATP2B4P23634 1241 aa23.83■■□□□ 1.4
CCDC130-201ENST00000221554 ANKRD20A12PQ8NF67 263 aa23.83■■□□□ 1.4
CCDC130-201ENST00000221554 CCDC51Q96ER9 411 aa23.83■■□□□ 1.4
CCDC130-201ENST00000221554 MED15Q96RN5 788 aa23.83■■□□□ 1.4
CCDC130-201ENST00000221554 IL17RBQ9NRM6 502 aa23.83■■□□□ 1.4
CCDC130-201ENST00000221554 CCDC194A0A1B0GVG4 234 aa23.82■■□□□ 1.4
CCDC130-201ENST00000221554 SMARCA1P28370 1054 aa23.82■■□□□ 1.4
CCDC130-201ENST00000221554 MCM7P33993 719 aa23.82■■□□□ 1.4
CCDC130-201ENST00000221554 PDXDC2PQ6P474 469 aa23.82■■□□□ 1.4
CCDC130-201ENST00000221554 TRIM65Q6PJ69 517 aa23.82■■□□□ 1.4
CCDC130-201ENST00000221554 SH3RF3Q8TEJ3 882 aaPredicted RBP23.82■■□□□ 1.4
CCDC130-201ENST00000221554 CCDC12Q8WUD4 166 aaPredicted RBP23.82■■□□□ 1.4
CCDC130-201ENST00000221554 RWDD2AQ9UIY3 292 aa23.82■■□□□ 1.4
CCDC130-201ENST00000221554 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.82■■□□□ 1.42e-8■■■■■ 28.6
CCDC130-201ENST00000221554 TPM1P09493 284 aa23.81■■□□□ 1.4
CCDC130-201ENST00000221554 ITIH6Q6UXX5 1313 aa23.81■■□□□ 1.4
CCDC130-201ENST00000221554 ADD3Q9UEY8 706 aaKnown RBP23.81■■□□□ 1.4
CCDC130-201ENST00000221554 DNAI1Q9UI46 699 aa23.81■■□□□ 1.4
CCDC130-201ENST00000221554 WNT7AO00755 349 aa23.8■■□□□ 1.4
CCDC130-201ENST00000221554 ZNF658Q5TYW1 1059 aaPredicted RBP23.8■■□□□ 1.4
CCDC130-201ENST00000221554 C4orf32Q8N8J7 132 aa23.8■■□□□ 1.4
CCDC130-201ENST00000221554 GTPBP4Q9BZE4 634 aaKnown RBP23.8■■□□□ 1.4
CCDC130-201ENST00000221554 MAD2L2Q9UI95 211 aa23.8■■□□□ 1.4
CCDC130-201ENST00000221554 TAF1LQ8IZX4 1826 aa23.8■■□□□ 1.4
CCDC130-201ENST00000221554 LRRC10BA6NIK2 292 aa23.8■■□□□ 1.4
CCDC130-201ENST00000221554 M0R2N6 131 aa23.8■■□□□ 1.4
CCDC130-201ENST00000221554 PRPHP41219 470 aa23.8■■□□□ 1.4
CCDC130-201ENST00000221554 DTHD1Q6ZMT9 781 aa23.8■■□□□ 1.4
CCDC130-201ENST00000221554 SMIM5Q71RC9 77 aa23.8■■□□□ 1.4
CCDC130-201ENST00000221554 RPGRQ92834 1020 aaKnown RBP23.8■■□□□ 1.4
CCDC130-201ENST00000221554 BARHL2Q9NY43 387 aa23.8■■□□□ 1.4
CCDC130-201ENST00000221554 PALM3A6NDB9 673 aaPredicted RBP23.79■■□□□ 1.4
CCDC130-201ENST00000221554 CD44P16070 742 aaKnown RBP23.79■■□□□ 1.4
CCDC130-201ENST00000221554 NFIXQ14938 502 aa23.79■■□□□ 1.4
CCDC130-201ENST00000221554 APTXQ7Z2E3 356 aaKnown RBP23.79■■□□□ 1.4
CCDC130-201ENST00000221554 UPF1Q92900 1129 aaKnown RBP eCLIP23.79■■□□□ 1.4
CCDC130-201ENST00000221554 FAM163AQ96GL9 167 aaPredicted RBP23.79■■□□□ 1.4
CCDC130-201ENST00000221554 MAGEF1Q9HAY2 307 aa23.79■■□□□ 1.4
CCDC130-201ENST00000221554 LIMA1Q9UHB6 759 aaKnown RBP23.79■■□□□ 1.4
CCDC130-201ENST00000221554 PBX1P40424 430 aa23.78■■□□□ 1.4
CCDC130-201ENST00000221554 EVX2Q03828 476 aa23.78■■□□□ 1.4
CCDC130-201ENST00000221554 TRIM14Q14142 442 aa23.78■■□□□ 1.4
CCDC130-201ENST00000221554 NOM1Q5C9Z4 860 aaKnown RBP23.78■■□□□ 1.4
CCDC130-201ENST00000221554 KLHL10Q6JEL2 608 aa23.78■■□□□ 1.4
CCDC130-201ENST00000221554 CNGA4Q8IV77 575 aa23.78■■□□□ 1.4
CCDC130-201ENST00000221554 SPZ1Q9BXG8 430 aa23.78■■□□□ 1.4
CCDC130-201ENST00000221554 CUEDC2Q9H467 287 aa23.78■■□□□ 1.4
CCDC130-201ENST00000221554 TNRC6CQ9HCJ0 1690 aaKnown RBP23.78■■□□□ 1.4
CCDC130-201ENST00000221554 GPR75-ASB3A0A0A6YYF3 556 aa23.78■■□□□ 1.4
CCDC130-201ENST00000221554 IL1R1P14778 569 aa23.78■■□□□ 1.4
CCDC130-201ENST00000221554 ORC2Q13416 577 aaPredicted RBP23.78■■□□□ 1.4
CCDC130-201ENST00000221554 HSP90AA4PQ58FG1 418 aa23.78■■□□□ 1.4
CCDC130-201ENST00000221554 RRAGBQ5VZM2 374 aa23.78■■□□□ 1.4
CCDC130-201ENST00000221554 CCDC24Q8N4L8 307 aa23.78■■□□□ 1.4
CCDC130-201ENST00000221554 IGSF22Q8N9C0 903 aa23.78■■□□□ 1.4
CCDC130-201ENST00000221554 TBC1D22AQ8WUA7 517 aa23.78■■□□□ 1.4
CCDC130-201ENST00000221554 TGFBRAP1Q8WUH2 860 aa23.78■■□□□ 1.4
CCDC130-201ENST00000221554 RBM17Q96I25 401 aaKnown RBP23.78■■□□□ 1.4
CCDC130-201ENST00000221554 CCSER1Q9C0I3 900 aa23.78■■□□□ 1.4
CCDC130-201ENST00000221554 HMGB2P26583 209 aaKnown RBP23.77■■□□□ 1.4
CCDC130-201ENST00000221554 STAT6P42226 847 aa23.77■■□□□ 1.4
CCDC130-201ENST00000221554 ADKP55263 362 aaKnown RBP23.77■■□□□ 1.4
CCDC130-201ENST00000221554 PAK1Q13153 545 aa23.77■■□□□ 1.4
CCDC130-201ENST00000221554 IL17AQ16552 155 aa23.77■■□□□ 1.4
CCDC130-201ENST00000221554 RTFDC1Q9BY42 306 aaPredicted RBP23.77■■□□□ 1.4
CCDC130-201ENST00000221554 DDX41Q9UJV9 622 aaKnown RBP23.77■■□□□ 1.4
CCDC130-201ENST00000221554 NAV1Q8NEY1 1877 aa23.77■■□□□ 1.4
CCDC130-201ENST00000221554 RGPD3A6NKT7 1758 aaPredicted RBP23.77■■□□□ 1.4
CCDC130-201ENST00000221554 RGPD4Q7Z3J3 1758 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms