RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 SARM1Q6SZW1 724 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 PODNQ7Z5L7 613 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 CCDC63Q8NA47 563 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 HVCN1Q96D96 273 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 C19orf44Q9H6X5 657 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 KCNK9Q9NPC2 374 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 RRAGDQ9NQL2 400 aaPredicted RBP4.87□□□□□ -1.63
CHD9-201ENST00000219084 AGTPBP1Q9UPW5 1226 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 DNM3Q9UQ16 869 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 ARHGEF28Q8N1W1 1705 aaKnown RBP4.87□□□□□ -1.63
CHD9-201ENST00000219084 ATP5J2-PTCD1G3V325 749 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 HSPA8P11142 646 aaKnown RBP4.87□□□□□ -1.63
CHD9-201ENST00000219084 XRCC5P13010 732 aaKnown RBP4.87□□□□□ -1.63
CHD9-201ENST00000219084 CUL4AQ13619 759 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 MORC3Q14149 939 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 NBPF9Q3BBW0 867 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 PPP4R3CPQ6ZMV5 832 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 CDC37L1Q7L3B6 337 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 PPP4R1Q8TF05 950 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 HAUS8Q9BT25 410 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 FAM169AQ9Y6X4 670 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 FOXP2O15409 715 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 RGS16O15492 202 aaPredicted RBP4.87□□□□□ -1.63
CHD9-201ENST00000219084 NONOQ15233 471 aaKnown RBP eCLIP4.87□□□□□ -1.63
CHD9-201ENST00000219084 MYSM1Q5VVJ2 828 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 MKL1Q969V6 931 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 SEC24BO95487 1268 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 KRT9P35527 623 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 SNCBQ16143 134 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 KRT26Q7Z3Y9 468 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 ALDH8A1Q9H2A2 487 aaPredicted RBP4.87□□□□□ -1.63
CHD9-201ENST00000219084 TMX1Q9H3N1 280 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 JRKLQ9Y4A0 524 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 MYH10P35580 1976 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 PREX1Q8TCU6 1659 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 PASKQ96RG2 1323 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 NRKQ7Z2Y5 1582 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 E7EWF7 191 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 ZWINTO95229 277 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 ATP6V1AP38606 617 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 ALCAMQ13740 583 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 PPP1R21Q6ZMI0 780 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 EXOC8Q8IYI6 725 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 PBKQ96KB5 322 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 DEPDC5O75140 1603 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 SLC26A4O43511 780 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 LMNAP02545 664 aaKnown RBP4.87□□□□□ -1.63
CHD9-201ENST00000219084 DZIP3Q86Y13 1208 aaKnown RBP4.87□□□□□ -1.63
CHD9-201ENST00000219084 CCDC85AQ96PX6 553 aaPredicted RBP4.87□□□□□ -1.63
CHD9-201ENST00000219084 MTA3Q9BTC8 594 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 XPO4Q9C0E2 1151 aaKnown RBP4.87□□□□□ -1.63
CHD9-201ENST00000219084 TXLNGQ9NUQ3 528 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 FMN2Q9NZ56 1722 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 PLEKHG3A1L390 1219 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 C6orf229H3BNL8 230 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 CLGNO14967 610 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 HIP1RO75146 1068 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 ATP5HO75947 161 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 STRN3Q13033 797 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 PSMD2Q13200 908 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 GCKRQ14397 625 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 CCDC89Q8N998 374 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 NUF2Q9BZD4 464 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 TMEM63CQ9P1W3 806 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 DIP2AQ14689 1571 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 ZNF853P0CG23 659 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 BPIFB4P59827 614 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 FNBP1Q96RU3 617 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 PFDN4Q9NQP4 134 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 SH3GLB2Q9NR46 395 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 CDC23Q9UJX2 597 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 PCDHB13Q9Y5F0 798 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 E7EVH7 732 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 ZBTB17Q13105 803 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 NR1H3Q13133 447 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 AKNAD1Q5T1N1 836 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 HHATQ5VTY9 493 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 RNF168Q8IYW5 571 aaPredicted RBP4.86□□□□□ -1.63
CHD9-201ENST00000219084 FBXO41Q8TF61 875 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 XAGE2Q96GT9 111 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 PHACTR3Q96KR7 559 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 CSRNP1Q96S65 589 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 DRC3Q9H069 523 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 PA2G4Q9UQ80 394 aaKnown RBP4.86□□□□□ -1.63
CHD9-201ENST00000219084 MAP3K19Q56UN5 1328 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 PPRC1Q5VV67 1664 aaKnown RBP4.86□□□□□ -1.63
CHD9-201ENST00000219084 CTNNA1P35221 906 aaKnown RBP4.86□□□□□ -1.63
CHD9-201ENST00000219084 KLHL30Q0D2K2 578 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 DCAF17Q5H9S7 520 aaPredicted RBP4.86□□□□□ -1.63
CHD9-201ENST00000219084 EMBQ6PCB8 327 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 C16orf71Q8IYS4 520 aaPredicted RBP4.86□□□□□ -1.63
CHD9-201ENST00000219084 SPATA5Q8NB90 893 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.86□□□□□ -1.63
CHD9-201ENST00000219084 PPP1R13BQ96KQ4 1090 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 EYA1Q99502 592 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 CARD6Q9BX69 1037 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 RWDD2AQ9UIY3 292 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 CCDC160A6NGH7 325 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 SUN1O94901 812 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 MBD4O95243 580 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms