RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 BMP15O95972 392 aa19.74■□□□□ 0.75
RABGGTA-201ENST00000216840 TTC38Q5R3I4 469 aa19.74■□□□□ 0.75
RABGGTA-201ENST00000216840 PIK3AP1Q6ZUJ8 805 aa19.74■□□□□ 0.75
RABGGTA-201ENST00000216840 CLEC10AQ8IUN9 316 aa19.74■□□□□ 0.75
RABGGTA-201ENST00000216840 DHX36Q9H2U1 1008 aaKnown RBP19.74■□□□□ 0.75
RABGGTA-201ENST00000216840 DNAJC18Q9H819 358 aa19.74■□□□□ 0.75
RABGGTA-201ENST00000216840 BARHL2Q9NY43 387 aa19.74■□□□□ 0.75
RABGGTA-201ENST00000216840 CCDC39Q9UFE4 941 aa19.74■□□□□ 0.75
RABGGTA-201ENST00000216840 DDTLA6NHG4 134 aaPredicted RBP19.73■□□□□ 0.75
RABGGTA-201ENST00000216840 SLURP2P0DP57 97 aa19.73■□□□□ 0.75
RABGGTA-201ENST00000216840 PDHBP11177 359 aa19.73■□□□□ 0.75
RABGGTA-201ENST00000216840 TRAPPC10P48553 1259 aa19.73■□□□□ 0.75
RABGGTA-201ENST00000216840 PLCB2Q00722 1185 aa19.73■□□□□ 0.75
RABGGTA-201ENST00000216840 ZNF174Q15697 407 aa19.73■□□□□ 0.75
RABGGTA-201ENST00000216840 SH3BP5LQ7L8J4 393 aa19.73■□□□□ 0.75
RABGGTA-201ENST00000216840 HEATR3Q7Z4Q2 680 aa19.73■□□□□ 0.75
RABGGTA-201ENST00000216840 LRRC47Q8N1G4 583 aaKnown RBP19.73■□□□□ 0.75
RABGGTA-201ENST00000216840 CCDC148Q8NFR7 591 aa19.73■□□□□ 0.75
RABGGTA-201ENST00000216840 FAM13BQ9NYF5 915 aa19.73■□□□□ 0.75
RABGGTA-201ENST00000216840 TTLL1O95922 423 aa19.72■□□□□ 0.75
RABGGTA-201ENST00000216840 EIF6P56537 245 aaKnown RBP19.72■□□□□ 0.75
RABGGTA-201ENST00000216840 LONRF3Q496Y0 759 aa19.72■□□□□ 0.75
RABGGTA-201ENST00000216840 ZSCAN30Q86W11 494 aa19.72■□□□□ 0.75
RABGGTA-201ENST00000216840 FAM177A1Q8N128 213 aaPredicted RBP19.72■□□□□ 0.75
RABGGTA-201ENST00000216840 DAGLBQ8NCG7 672 aa19.72■□□□□ 0.75
RABGGTA-201ENST00000216840 CSRNP2Q9H175 543 aa19.72■□□□□ 0.75
RABGGTA-201ENST00000216840 CLIP2Q9UDT6 1046 aa19.72■□□□□ 0.75
RABGGTA-201ENST00000216840 COL4A5P29400 1685 aa19.72■□□□□ 0.75
RABGGTA-201ENST00000216840 M0R2N6 131 aa19.72■□□□□ 0.75
RABGGTA-201ENST00000216840 SNHG28P0DPA3 235 aa19.72■□□□□ 0.75
RABGGTA-201ENST00000216840 CFAP100Q494V2 611 aa19.72■□□□□ 0.75
RABGGTA-201ENST00000216840 KRBA2Q6ZNG9 492 aa19.72■□□□□ 0.75
RABGGTA-201ENST00000216840 GALNT17Q6IS24 598 aa19.71■□□□□ 0.75
RABGGTA-201ENST00000216840 RRP36Q96EU6 259 aaKnown RBP19.71■□□□□ 0.75
RABGGTA-201ENST00000216840 CCDC17Q96LX7 622 aa19.71■□□□□ 0.75
RABGGTA-201ENST00000216840 TDRD3Q9H7E2 651 aaKnown RBP19.71■□□□□ 0.75
RABGGTA-201ENST00000216840 PI4KBQ9UBF8 816 aa19.71■□□□□ 0.75
RABGGTA-201ENST00000216840 ASPRV1Q53RT3 343 aa19.71■□□□□ 0.75
RABGGTA-201ENST00000216840 CEP57L1Q8IYX8 460 aa19.71■□□□□ 0.75
RABGGTA-201ENST00000216840 RIOX1Q9H6W3 641 aa19.71■□□□□ 0.75
RABGGTA-201ENST00000216840 ZNF277Q9NRM2 450 aaPredicted RBP19.71■□□□□ 0.75
RABGGTA-201ENST00000216840 FRMPD2Q68DX3 1309 aaPredicted RBP19.7■□□□□ 0.74
RABGGTA-201ENST00000216840 MPHOSPH10O00566 681 aaKnown RBP19.7■□□□□ 0.74
RABGGTA-201ENST00000216840 ATP2C1P98194 919 aaPredicted RBP19.7■□□□□ 0.74
RABGGTA-201ENST00000216840 RSBN1LQ6PCB5 846 aaPredicted RBP19.7■□□□□ 0.74
RABGGTA-201ENST00000216840 METTL16Q86W50 562 aaKnown RBP19.7■□□□□ 0.74
RABGGTA-201ENST00000216840 ELOA2Q8IYF1 753 aaPredicted RBP19.7■□□□□ 0.74
RABGGTA-201ENST00000216840 LARGE2Q8N3Y3 721 aa19.7■□□□□ 0.74
RABGGTA-201ENST00000216840 RASGRP4Q8TDF6 673 aa19.7■□□□□ 0.74
RABGGTA-201ENST00000216840 FERMT2Q96AC1 680 aa19.7■□□□□ 0.74
RABGGTA-201ENST00000216840 PRMT6Q96LA8 375 aaPredicted RBP19.7■□□□□ 0.74
RABGGTA-201ENST00000216840 UBA5Q9GZZ9 404 aa19.7■□□□□ 0.74
RABGGTA-201ENST00000216840 TUBE1Q9UJT0 475 aa19.7■□□□□ 0.74
RABGGTA-201ENST00000216840 PCDHA6Q9UN73 950 aa19.7■□□□□ 0.74
RABGGTA-201ENST00000216840 PCDHA8Q9Y5H6 950 aa19.7■□□□□ 0.74
RABGGTA-201ENST00000216840 PTMAP06454 111 aaKnown RBP19.69■□□□□ 0.74
RABGGTA-201ENST00000216840 NLRP12P59046 1061 aa19.69■□□□□ 0.74
RABGGTA-201ENST00000216840 PTGDRQ13258 359 aa19.69■□□□□ 0.74
RABGGTA-201ENST00000216840 USP49Q70CQ1 688 aa19.69■□□□□ 0.74
RABGGTA-201ENST00000216840 ZSCAN29Q8IWY8 852 aaPredicted RBP19.69■□□□□ 0.74
RABGGTA-201ENST00000216840 DHX40Q8IX18 779 aaKnown RBP19.69■□□□□ 0.74
RABGGTA-201ENST00000216840 CNNM3Q8NE01 707 aa19.69■□□□□ 0.74
RABGGTA-201ENST00000216840 PIGSQ96S52 555 aa19.69■□□□□ 0.74
RABGGTA-201ENST00000216840 VAT1LQ9HCJ6 419 aa19.69■□□□□ 0.74
RABGGTA-201ENST00000216840 FAM196BA6NMK8 535 aa19.69■□□□□ 0.74
RABGGTA-201ENST00000216840 PNOCQ13519 176 aa19.69■□□□□ 0.74
RABGGTA-201ENST00000216840 ZRSR1Q15695 479 aaKnown RBP19.69■□□□□ 0.74
RABGGTA-201ENST00000216840 DPCR1Q3MIW9 517 aa19.69■□□□□ 0.74
RABGGTA-201ENST00000216840 HOMER1Q86YM7 354 aa19.69■□□□□ 0.74
RABGGTA-201ENST00000216840 NAT10Q9H0A0 1025 aaKnown RBP19.69■□□□□ 0.74
RABGGTA-201ENST00000216840 ZMYND12Q9H0C1 365 aa19.69■□□□□ 0.74
RABGGTA-201ENST00000216840 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.69■□□□□ 0.74
RABGGTA-201ENST00000216840 PSMD14O00487 310 aa19.68■□□□□ 0.74
RABGGTA-201ENST00000216840 BIN1O00499 593 aa19.68■□□□□ 0.74
RABGGTA-201ENST00000216840 POLR2DO15514 142 aaKnown RBP19.68■□□□□ 0.74
RABGGTA-201ENST00000216840 ENTPD3O75355 529 aa19.68■□□□□ 0.74
RABGGTA-201ENST00000216840 RAD17O75943 681 aa19.68■□□□□ 0.74
RABGGTA-201ENST00000216840 VIL1P09327 827 aaKnown RBP19.68■□□□□ 0.74
RABGGTA-201ENST00000216840 FOXP4Q8IVH2 680 aaPredicted RBP19.68■□□□□ 0.74
RABGGTA-201ENST00000216840 GMLQ99445 158 aa19.68■□□□□ 0.74
RABGGTA-201ENST00000216840 SEC63Q9UGP8 760 aaKnown RBP19.68■□□□□ 0.74
RABGGTA-201ENST00000216840 ATRNL1Q5VV63 1379 aa19.68■□□□□ 0.74
RABGGTA-201ENST00000216840 GOLGA6L19H0YKK7 550 aa19.67■□□□□ 0.74
RABGGTA-201ENST00000216840 ZBTB7AO95365 584 aa19.67■□□□□ 0.74
RABGGTA-201ENST00000216840 NAPAP54920 295 aa19.67■□□□□ 0.74
RABGGTA-201ENST00000216840 MDM2Q00987 491 aaPredicted RBP19.67■□□□□ 0.74
RABGGTA-201ENST00000216840 PPP4R3BQ5MIZ7 849 aa19.67■□□□□ 0.74
RABGGTA-201ENST00000216840 TATDN1Q6P1N9 297 aa19.67■□□□□ 0.74
RABGGTA-201ENST00000216840 CCDC12Q8WUD4 166 aaPredicted RBP19.67■□□□□ 0.74
RABGGTA-201ENST00000216840 VPS33BQ9H267 617 aa19.67■□□□□ 0.74
RABGGTA-201ENST00000216840 CCDC194A0A1B0GVG4 234 aa19.67■□□□□ 0.74
RABGGTA-201ENST00000216840 MCM7P33993 719 aa19.67■□□□□ 0.74
RABGGTA-201ENST00000216840 CLCN1P35523 988 aa19.67■□□□□ 0.74
RABGGTA-201ENST00000216840 ZNF543Q08ER8 600 aa19.67■□□□□ 0.74
RABGGTA-201ENST00000216840 CERKLQ49MI3 558 aaPredicted RBP19.67■□□□□ 0.74
RABGGTA-201ENST00000216840 GPCPD1Q9NPB8 672 aa19.67■□□□□ 0.74
RABGGTA-201ENST00000216840 SERTAD1Q9UHV2 236 aa19.67■□□□□ 0.74
RABGGTA-201ENST00000216840 COL2A1P02458 1487 aaPredicted RBP19.67■□□□□ 0.74
RABGGTA-201ENST00000216840 SOGA3Q5TF21 947 aa19.66■□□□□ 0.74
RABGGTA-201ENST00000216840 EPSTI1Q96J88 318 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms