RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 M0R2N6 131 aa21.31■■□□□ 1
CTSA-201ENST00000191018 PSMD14O00487 310 aa21.31■■□□□ 1
CTSA-201ENST00000191018 ADAMTS3O15072 1205 aa21.31■■□□□ 1
CTSA-201ENST00000191018 ENTPD3O75355 529 aa21.31■■□□□ 1
CTSA-201ENST00000191018 SYKP43405 635 aa21.31■■□□□ 1
CTSA-201ENST00000191018 BLIDQ8IZY5 108 aa21.31■■□□□ 1
CTSA-201ENST00000191018 DAGLBQ8NCG7 672 aa21.31■■□□□ 1
CTSA-201ENST00000191018 PCDHA4Q9UN74 947 aa21.31■■□□□ 1
CTSA-201ENST00000191018 GOLGB1Q14789 3259 aaKnown RBP21.31■■□□□ 1
CTSA-201ENST00000191018 STXBP3O00186 592 aa21.3■■□□□ 1
CTSA-201ENST00000191018 SLURP2P0DP57 97 aa21.3■■□□□ 1
CTSA-201ENST00000191018 TRAPPC10P48553 1259 aa21.3■■□□□ 1
CTSA-201ENST00000191018 GALNT17Q6IS24 598 aa21.3■■□□□ 1
CTSA-201ENST00000191018 TATDN1Q6P1N9 297 aa21.3■■□□□ 1
CTSA-201ENST00000191018 FOXP4Q8IVH2 680 aaPredicted RBP21.3■■□□□ 1
CTSA-201ENST00000191018 CCDC148Q8NFR7 591 aa21.3■■□□□ 1
CTSA-201ENST00000191018 RIOX1Q9H6W3 641 aa21.3■■□□□ 1
CTSA-201ENST00000191018 CLIP2Q9UDT6 1046 aa21.3■■□□□ 1
CTSA-201ENST00000191018 WNT7AO00755 349 aa21.3■■□□□ 1
CTSA-201ENST00000191018 RAD17O75943 681 aa21.3■■□□□ 1
CTSA-201ENST00000191018 BMP15O95972 392 aa21.3■■□□□ 1
CTSA-201ENST00000191018 GRIN1Q05586 938 aa21.3■■□□□ 1
CTSA-201ENST00000191018 ASPRV1Q53RT3 343 aa21.3■■□□□ 1
CTSA-201ENST00000191018 CLEC10AQ8IUN9 316 aa21.3■■□□□ 1
CTSA-201ENST00000191018 LRRC47Q8N1G4 583 aaKnown RBP21.3■■□□□ 1
CTSA-201ENST00000191018 TRIM44Q96DX7 344 aaPredicted RBP21.3■■□□□ 1
CTSA-201ENST00000191018 CPVLQ9H3G5 476 aa21.3■■□□□ 1
CTSA-201ENST00000191018 CBX8Q9HC52 389 aa21.3■■□□□ 1
CTSA-201ENST00000191018 ATP2B1P20020 1258 aa21.29■■□□□ 1
CTSA-201ENST00000191018 POLD1P28340 1107 aa21.29■■□□□ 1
CTSA-201ENST00000191018 STX1AQ16623 288 aa21.29■■□□□ 1
CTSA-201ENST00000191018 PPP4R3BQ5MIZ7 849 aa21.29■■□□□ 1
CTSA-201ENST00000191018 KIAA1468Q9P260 1216 aa21.29■■□□□ 1
CTSA-201ENST00000191018 USP25Q9UHP3 1055 aa21.29■■□□□ 1
CTSA-201ENST00000191018 ATF5Q9Y2D1 282 aaPredicted RBP21.29■■□□□ 1
CTSA-201ENST00000191018 SPDYE2BA6NHP3 402 aa21.28■■□□□ 1
CTSA-201ENST00000191018 SPDYE6P0CI01 402 aa21.28■■□□□ 1
CTSA-201ENST00000191018 EIF6P56537 245 aaKnown RBP21.28■■□□□ 1
CTSA-201ENST00000191018 TTC38Q5R3I4 469 aa21.28■■□□□ 1
CTSA-201ENST00000191018 DNAJC25Q9H1X3 360 aa21.28■■□□□ 1
CTSA-201ENST00000191018 KCNH3Q9ULD8 1083 aa21.28■■□□□ 1
CTSA-201ENST00000191018 ZNRF3Q9ULT6 936 aa21.28■■□□□ 1
CTSA-201ENST00000191018 PIK3AP1Q6ZUJ8 805 aa21.28■■□□□ 1
CTSA-201ENST00000191018 HEATR3Q7Z4Q2 680 aa21.28■■□□□ 1
CTSA-201ENST00000191018 ZSCAN29Q8IWY8 852 aaPredicted RBP21.28■■□□□ 1
CTSA-201ENST00000191018 RRP36Q96EU6 259 aaKnown RBP21.28■■□□□ 1
CTSA-201ENST00000191018 ZNF165P49910 485 aa21.27■■□□□ 1
CTSA-201ENST00000191018 ZMYND12Q9H0C1 365 aa21.27■■□□□ 1
CTSA-201ENST00000191018 HDAC9Q9UKV0 1011 aa21.27■■□□□ 1
CTSA-201ENST00000191018 FAM196BA6NMK8 535 aa21.26■□□□□ 0.99
CTSA-201ENST00000191018 MPHOSPH10O00566 681 aaKnown RBP21.26■□□□□ 0.99
CTSA-201ENST00000191018 ZNF543Q08ER8 600 aa21.26■□□□□ 0.99
CTSA-201ENST00000191018 CERKLQ49MI3 558 aaPredicted RBP21.26■□□□□ 0.99
CTSA-201ENST00000191018 HS1BP3Q53T59 392 aa21.26■□□□□ 0.99
CTSA-201ENST00000191018 DALRD3Q5D0E6 543 aaKnown RBP21.26■□□□□ 0.99
CTSA-201ENST00000191018 LUZP1Q86V48 1076 aa21.26■□□□□ 0.99
CTSA-201ENST00000191018 NIM1KQ8IY84 436 aa21.26■□□□□ 0.99
CTSA-201ENST00000191018 ELOA2Q8IYF1 753 aaPredicted RBP21.26■□□□□ 0.99
CTSA-201ENST00000191018 ERCC4Q92889 916 aaPredicted RBP21.26■□□□□ 0.99
CTSA-201ENST00000191018 MKL1Q969V6 931 aa21.26■□□□□ 0.99
CTSA-201ENST00000191018 ANO10Q9NW15 660 aa21.26■□□□□ 0.99
CTSA-201ENST00000191018 FRMPD2Q68DX3 1309 aaPredicted RBP21.26■□□□□ 0.99
CTSA-201ENST00000191018 ATP2C1P98194 919 aaPredicted RBP21.26■□□□□ 0.99
CTSA-201ENST00000191018 AGBL3Q8NEM8 1001 aa21.26■□□□□ 0.99
CTSA-201ENST00000191018 FERMT2Q96AC1 680 aa21.26■□□□□ 0.99
CTSA-201ENST00000191018 UBA5Q9GZZ9 404 aa21.26■□□□□ 0.99
CTSA-201ENST00000191018 FAM13BQ9NYF5 915 aa21.26■□□□□ 0.99
CTSA-201ENST00000191018 PCDHA6Q9UN73 950 aa21.26■□□□□ 0.99
CTSA-201ENST00000191018 PCDHA8Q9Y5H6 950 aa21.26■□□□□ 0.99
CTSA-201ENST00000191018 AP5Z1O43299 807 aa21.25■□□□□ 0.99
CTSA-201ENST00000191018 ZNF174Q15697 407 aa21.25■□□□□ 0.99
CTSA-201ENST00000191018 SPECC1Q5M775 1068 aa21.25■□□□□ 0.99
CTSA-201ENST00000191018 C11orf57Q6ZUT1 292 aaPredicted RBP21.25■□□□□ 0.99
CTSA-201ENST00000191018 CCDC12Q8WUD4 166 aaPredicted RBP21.25■□□□□ 0.99
CTSA-201ENST00000191018 PIGSQ96S52 555 aa21.25■□□□□ 0.99
CTSA-201ENST00000191018 CSRNP2Q9H175 543 aa21.25■□□□□ 0.99
CTSA-201ENST00000191018 NYAP2Q9P242 653 aa21.25■□□□□ 0.99
CTSA-201ENST00000191018 ZBTB12Q9Y330 459 aaPredicted RBP21.25■□□□□ 0.99
CTSA-201ENST00000191018 ARFGEF1Q9Y6D6 1849 aa21.25■□□□□ 0.99
CTSA-201ENST00000191018 hCG_1984214I3L0E3 225 aa21.24■□□□□ 0.99
CTSA-201ENST00000191018 IQCB1Q15051 598 aa21.24■□□□□ 0.99
CTSA-201ENST00000191018 LONRF3Q496Y0 759 aa21.24■□□□□ 0.99
CTSA-201ENST00000191018 KRBA2Q6ZNG9 492 aa21.24■□□□□ 0.99
CTSA-201ENST00000191018 FAM43AQ8N2R8 423 aa21.24■□□□□ 0.99
CTSA-201ENST00000191018 OGFOD1Q8N543 542 aa21.24■□□□□ 0.99
CTSA-201ENST00000191018 ZNF713Q8N859 430 aaPredicted RBP21.24■□□□□ 0.99
CTSA-201ENST00000191018 MTMR14Q8NCE2 650 aa21.24■□□□□ 0.99
CTSA-201ENST00000191018 SGIP1Q9BQI5 828 aa21.24■□□□□ 0.99
CTSA-201ENST00000191018 KANSL2Q9H9L4 492 aa21.24■□□□□ 0.99
CTSA-201ENST00000191018 SEC63Q9UGP8 760 aaKnown RBP21.24■□□□□ 0.99
CTSA-201ENST00000191018 ADCY5O95622 1261 aa21.24■□□□□ 0.99
CTSA-201ENST00000191018 DLGAP5Q15398 846 aa21.24■□□□□ 0.99
CTSA-201ENST00000191018 GPATCH4Q5T3I0 446 aaKnown RBP21.24■□□□□ 0.99
CTSA-201ENST00000191018 HOMER1Q86YM7 354 aa21.24■□□□□ 0.99
CTSA-201ENST00000191018 TRIM34Q9BYJ4 488 aa21.24■□□□□ 0.99
CTSA-201ENST00000191018 TMOD2Q9NZR1 351 aa21.24■□□□□ 0.99
CTSA-201ENST00000191018 TUBE1Q9UJT0 475 aa21.24■□□□□ 0.99
CTSA-201ENST00000191018 ESYT2A0FGR8 921 aa21.23■□□□□ 0.99
CTSA-201ENST00000191018 NAPAP54920 295 aa21.23■□□□□ 0.99
CTSA-201ENST00000191018 CXCL9Q07325 125 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms