RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 GnaqP21279 359 aa17.66■□□□□ 0.42
Sdc1-205ENSMUST00000171158 NfixP70257 488 aa17.66■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Tmed8Q3UHI4 326 aa17.66■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Ncoa7Q6DFV7 943 aa17.66■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Atxn2lQ7TQH0 1049 aaKnown RBP17.66■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Pramel6Q810Y9 485 aa17.66■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Nop9Q8BMC4 636 aaKnown RBP17.66■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Iqcb1Q8BP00 598 aa17.66■□□□□ 0.42
Sdc1-205ENSMUST00000171158 NelfbQ8C4Y3 580 aa17.66■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Mmtag2Q99LX5 260 aaKnown RBP17.66■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Ltbp2O08999 1813 aa17.65■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Ppp4cP97470 307 aa17.65■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Ces3aQ63880 571 aa17.65■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Pip5kl1Q6U7H8 395 aa17.65■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Tacc1Q6Y685 774 aa17.65■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Aggf1Q7TN31 711 aa17.65■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Pnpla2Q8BJ56 486 aa17.65■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Zdhhc14Q8BQQ1 489 aa17.65■□□□□ 0.42
Sdc1-205ENSMUST00000171158 LRWD1Q8BUI3 648 aaKnown RBP17.65■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Q8CEZ4 452 aa17.65■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Eps8l1Q8R5F8 716 aa17.65■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Ces3bQ8VCU1 571 aa17.65■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Mrpl12Q9DB15 201 aaKnown RBP17.65■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Clip2Q9Z0H8 1047 aa17.65■□□□□ 0.42
Sdc1-205ENSMUST00000171158 MthfslL7N466 203 aa17.65■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Ppfibp2O35711 882 aa17.65■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Armc2Q3URY6 854 aa17.65■□□□□ 0.42
Sdc1-205ENSMUST00000171158 CtcfQ61164 736 aaKnown RBP17.65■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Kctd3Q8BFX3 815 aa17.65■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Setdb2Q8C267 713 aa17.65■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Ildr1Q8CBR1 537 aa17.65■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Q91WD4 421 aa17.65■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Rai14Q9EP71 979 aaKnown RBP17.65■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Copb1Q9JIF7 953 aa17.65■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Psmd10Q9Z2X2 231 aa17.65■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Frmpd4A2AFR3 1320 aa17.65■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Tsc2Q61037 1814 aa17.64■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Rasa2P58069 847 aa17.64■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Mdh1bQ5F204 500 aa17.64■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Cnga2Q62398 664 aa17.64■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Sgsm1Q8BPQ7 1093 aa17.64■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Tbc1d23Q8K0F1 684 aa17.64■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Tcp11l2Q8K1H7 517 aa17.64■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Tube1Q9D6T1 475 aa17.64■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Rbm6S4R1W5 1118 aaKnown RBP17.64■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Zfp853A0A1D5RM95 733 aa17.64■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Zfand4D3Z3C6 739 aa17.64■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Actn3O88990 900 aaKnown RBP17.64■□□□□ 0.41
Sdc1-205ENSMUST00000171158 PRAG1Q571I4 1179 aa17.64■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Hspa4Q61316 841 aa17.64■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Tmem47Q9JJG6 181 aa17.64■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Nr2e3Q9QXZ7 395 aa17.64■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Herc3A6H6S0 1050 aa17.63■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Nfil3O08750 462 aa17.63■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Mrps31Q61733 384 aaKnown RBP17.63■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Ccdc38Q8CDN8 563 aa17.63■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Ccdc12Q8R344 166 aaKnown RBP17.63■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Nup188Q6ZQH8 1759 aa17.63■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Rad23aP54726 363 aa17.63■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Rc3h1Q4VGL6 1130 aaKnown RBP17.63■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Tmx1Q8VBT0 278 aa17.63■□□□□ 0.41
Sdc1-205ENSMUST00000171158 HibadhQ99L13 335 aaKnown RBP17.63■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Zranb2Q9R020 330 aaKnown RBP17.63■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Rsrc2A2RTL5 376 aaKnown RBP17.62■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Krt78E9Q0F0 1068 aa17.62■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Kcna1P16388 495 aa17.62■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Prpf38aQ4FK66 312 aaKnown RBP17.62■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Q8C5C9 218 aa17.62■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Spata32Q8C5V0 334 aa17.62■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Lrit1Q8K099 624 aa17.62■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Amhr2Q8K592 568 aa17.62■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Mss51Q9D5Z5 446 aa17.62■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Kif23E9Q5G3 953 aa17.61■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Nsrp1Q5NCR9 542 aa17.61■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Gpbp1Q6NXH3 473 aaKnown RBP17.61■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Dlg1Q811D0 905 aaKnown RBP17.61■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Ano2Q8CFW1 1002 aa17.61■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Rbm5Q91YE7 815 aaKnown RBP17.61■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Pcdh11xF6ZNL5 1338 aa17.61■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Gm4307E9PZY4 289 aa17.61■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Tmem132bF7BAB2 1078 aa17.61■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Slc39a2G3X943 309 aa17.61■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Gm4312K9J7E2 289 aa17.61■□□□□ 0.41
Sdc1-205ENSMUST00000171158 OplahQ8K010 1288 aa17.61■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Slc5a4bQ91ZP4 660 aa17.61■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Uso1Q9Z1Z0 959 aaKnown RBP17.61■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Arhgap33Q80YF9 1305 aa17.6■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Gm5580A0A0N4SVP8 411 aa17.6■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Serpinb6bO08804 377 aa17.6■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Nr1i2O54915 431 aa17.6■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Sema3fO88632 785 aa17.6■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Mcm6P97311 821 aa17.6■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Kcnb1Q03717 857 aa17.6■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Ccdc122Q8BVN0 290 aa17.6■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Slc44a4Q91VA1 707 aa17.6■□□□□ 0.41
Sdc1-205ENSMUST00000171158 UvssaQ9D479 717 aa17.6■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Slurp2P0DP59 97 aa17.6■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Tlr8P58682 1032 aa17.6■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Tpm4Q6IRU2 248 aa17.6■□□□□ 0.41
Sdc1-205ENSMUST00000171158 Phldb2Q8K1N2 1249 aa17.6■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 54.6 ms