RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Bag2Q91YN9 210 aa17.1■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Hps4Q99KG7 671 aa17.1■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Tpd52l2Q9CYZ2 220 aaKnown RBP17.1■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Saal1Q9D2C2 474 aa17.1■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Lrriq3Q14DL3 633 aa17.1■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Nckap5lQ6GQX2 1323 aa17.1■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Gm14525B1AZA0 212 aa17.1■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Gm2012B1B0R1 212 aa17.1■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Otud7bB2RUR8 840 aa17.1■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Enc1O35709 589 aa17.1■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Il15P48346 162 aa17.1■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 DSCC1Q14AI0 399 aa17.1■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Gm14819Q62478 212 aa17.1■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 AW822073A0A0N4SUK1 652 aa17.09■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 AdkP55264 361 aa17.09■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Spata18Q0P557 537 aa17.09■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Tgfb1i1Q62219 461 aa17.09■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 IqceQ6PCQ0 778 aa17.09■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Kctd6Q8BNL5 237 aa17.09■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Dph5Q9CWQ0 281 aa17.09■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Atp2a3Q64518 1038 aa17.09■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 MesdQ9ERE7 224 aa17.09■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Pik3caP42337 1068 aa17.09■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Q3TYL0 343 aa17.09■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Olfr118Q7TRJ6 321 aa17.09■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Actr5Q80US4 605 aaKnown RBP17.09■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Cnot10Q8BH15 744 aa17.09■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Stn1Q8K2X3 378 aa17.09■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Ushbp1Q8R370 680 aa17.09■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Taf4bG5E8Z2 855 aa17.09■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Gas7Q60780 421 aa17.09■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Speer3W4VSP1 261 aa17.09■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 PhbP67778 272 aaKnown RBP17.08■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Fhdc1Q3ULZ2 1149 aa17.08■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Cracr2aQ3UP38 310 aa17.08■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 LgsnQ8CIX8 563 aa17.08■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Riok3Q9DBU3 519 aaKnown RBP17.08■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Mtmr7Q9Z2C9 660 aa17.08■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Synj2Q9D2G5 1434 aa17.08■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 GabpaQ00422 454 aa17.08■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Prpf38aQ4FK66 312 aaKnown RBP17.08■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 DbnlQ62418 436 aa17.08■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Ints4Q8CIM8 964 aa17.08■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Ptch1Q61115 1434 aa17.08■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Gna15P30678 374 aa17.08■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Esyt2Q3TZZ7 845 aa17.08■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 4930504O13RikQ8C5Z9 145 aa17.08■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 1700020D05RikQ99PB1 294 aa17.08■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 4931423N10RikQ9D4J9 382 aa17.08■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Krt87Q6IMF0 495 aa17.08■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 SarnpQ9D1J3 210 aaKnown RBP17.08■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Galnt15Q9D2N8 638 aa17.08■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Cbx6Q9DBY5 414 aa17.08■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Fam208aQ69ZR9 1610 aaKnown RBP17.08■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Ppp1r12cQ3UMT1 782 aa17.07■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Birc2Q62210 612 aa17.07■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 D130040H23RikQ8BII3 405 aa17.07■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Ncoa5Q91W39 579 aaKnown RBP17.07■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Fbxo3Q9DC63 480 aa17.07■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Plagl1Q9JLQ4 704 aa17.07■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Usp42B2RQC2 1324 aaKnown RBP17.07■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Sik1Q60670 779 aa17.07■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Cplx3Q8R1B5 158 aa17.07■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 DexiQ9WUQ7 95 aa17.07■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Tulp1Q9Z273 543 aa17.07■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Myo1fP70248 1099 aa17.07■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 QarsQ8BML9 775 aa17.07■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Drc3Q9D5E4 523 aa17.07■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Fam217aQ9D9W6 419 aa17.07■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 RabggtaQ9JHK4 567 aa17.07■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Nxf1Q99JX7 618 aaKnown RBP17.07■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Glrx3Q9CQM9 337 aa17.07■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Abcb6Q9DC29 842 aa17.07■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Map3k4O08648 1597 aa17.06■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Kcnb2A6H8H5 907 aa17.06■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Kcnk16G5E845 292 aa17.06■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Gm10488Q4KL05 212 aa17.06■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Ano3A2AHL1 981 aa17.06■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Pde8bE9Q4S1 865 aa17.06■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 NeblQ0II04 452 aa17.06■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Nup62clA2AG10 272 aa17.06■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Tshz1Q5DTH5 1084 aa17.06■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Dzip3Q7TPV2 1204 aa17.06■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Nxf7Q80SZ6 620 aaKnown RBP17.06■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Enox1Q8BHR2 643 aaKnown RBP17.06■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Ankk1Q8BZ25 745 aa17.06■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Ccdc87Q8CDL9 855 aa17.06■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Med10Q9CXU0 135 aa17.06■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Ccdc92bQ5SUE3 299 aa17.06■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Serpinb1cQ5SV42 375 aa17.06■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Krt39Q6IFX4 482 aa17.06■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Clic6Q8BHB9 596 aa17.06■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Xpo5Q924C1 1204 aaKnown RBP17.06■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Ube4aE9Q735 1028 aa17.06■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Gna14P30677 355 aa17.06■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 MaeaQ4VC33 396 aa17.06■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Ovgp1Q62010 721 aa17.06■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Tor4aQ8BH02 426 aa17.06■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 Pold4Q9CWP8 107 aa17.06■□□□□ 0.32
Pcdha9-201ENSMUST00000115659 FancaQ9JL70 1439 aa17.05■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms