RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Abcd1P48410 736 aa12.96□□□□□ -0.33
Vps54-202ENSMUST00000109578 Rbm12b2Q66JV4 834 aaKnown RBP12.96□□□□□ -0.33
Vps54-202ENSMUST00000109578 Ttll4Q80UG8 1193 aa12.96□□□□□ -0.33
Vps54-202ENSMUST00000109578 Rasgrp4Q8BTM9 673 aa12.96□□□□□ -0.33
Vps54-202ENSMUST00000109578 Ccdc14Q8K2J4 934 aa12.96□□□□□ -0.33
Vps54-202ENSMUST00000109578 PpardP35396 440 aa12.96□□□□□ -0.34
Vps54-202ENSMUST00000109578 Gtpbp6Q3U6U5 514 aa12.96□□□□□ -0.34
Vps54-202ENSMUST00000109578 Tekt3Q6X6Z7 490 aa12.96□□□□□ -0.34
Vps54-202ENSMUST00000109578 Kctd3Q8BFX3 815 aa12.96□□□□□ -0.34
Vps54-202ENSMUST00000109578 Q8C5C9 218 aa12.96□□□□□ -0.34
Vps54-202ENSMUST00000109578 Tpcn1Q9EQJ0 817 aa12.96□□□□□ -0.34
Vps54-202ENSMUST00000109578 Znf609Q8BZ47 1413 aa12.96□□□□□ -0.34
Vps54-202ENSMUST00000109578 Adgra3Q7TT36 1310 aa12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Pfkfb3A7UAK5 555 aa12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Calm1P0DP26 149 aaKnown RBP12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Calm2P0DP27 149 aaKnown RBP12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Calm3P0DP28 149 aaKnown RBP12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Ftl1P29391 183 aa12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Eva1cP58659 440 aa12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Vsnl1P62761 191 aa12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Evi5P97366 809 aa12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Ddb1Q3U1J4 1140 aaKnown RBP12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Slc9a1Q61165 820 aa12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 GypcQ78HU7 95 aa12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 LarsQ8BMJ2 1178 aa12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Pspc1Q8R326 523 aaKnown RBP12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Gdap1l1Q8VE33 370 aa12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Zcchc17Q9ESX4 241 aaKnown RBP12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Ubxn8Q9QZ49 277 aa12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Slc39a2G3X943 309 aa12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Scgb2b19J3QM75 112 aa12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Igbp1Q61249 340 aa12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 SowahdQ8BY98 327 aa12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Efcab8Q8C9R9 203 aa12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Sash3Q8K352 380 aa12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Tktl2Q9D4D4 627 aa12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Uso1Q9Z1Z0 959 aaKnown RBP12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Kif23E9Q5G3 953 aa12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Meis3P97368 378 aa12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Jakmip3Q5DTN8 844 aa12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Txndc16Q7TN22 820 aa12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Epn1Q80VP1 575 aa12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Zdhhc14Q8BQQ1 489 aa12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Phldb2Q8K1N2 1249 aa12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Srgap2Q91Z67 1071 aa12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 DonsonQ9QXP4 560 aa12.95□□□□□ -0.34
Vps54-202ENSMUST00000109578 Akr1c19G3X9Y6 323 aa12.94□□□□□ -0.34
Vps54-202ENSMUST00000109578 Tmem232Q5K6N0 675 aa12.94□□□□□ -0.34
Vps54-202ENSMUST00000109578 HlfQ8BW74 295 aa12.94□□□□□ -0.34
Vps54-202ENSMUST00000109578 Rassf4Q8CB96 322 aa12.94□□□□□ -0.34
Vps54-202ENSMUST00000109578 Cbx8Q9QXV1 362 aa12.94□□□□□ -0.34
Vps54-202ENSMUST00000109578 Aox3G3X982 1335 aa12.94□□□□□ -0.34
Vps54-202ENSMUST00000109578 Nfil3O08750 462 aa12.94□□□□□ -0.34
Vps54-202ENSMUST00000109578 Ildr1Q8CBR1 537 aa12.94□□□□□ -0.34
Vps54-202ENSMUST00000109578 Ginm1Q91WR6 327 aa12.94□□□□□ -0.34
Vps54-202ENSMUST00000109578 NapgQ9CWZ7 312 aa12.94□□□□□ -0.34
Vps54-202ENSMUST00000109578 Cct6aP80317 531 aaKnown RBP12.94□□□□□ -0.34
Vps54-202ENSMUST00000109578 Ndufv1Q91YT0 464 aa12.94□□□□□ -0.34
Vps54-202ENSMUST00000109578 Psrc1Q9D0P7 329 aa12.94□□□□□ -0.34
Vps54-202ENSMUST00000109578 Serpina16D3Z660 418 aa12.93□□□□□ -0.34
Vps54-202ENSMUST00000109578 Myo19Q5SV80 963 aa12.93□□□□□ -0.34
Vps54-202ENSMUST00000109578 Lrrc1Q80VQ1 524 aa12.93□□□□□ -0.34
Vps54-202ENSMUST00000109578 Prpf40bQ80W14 870 aa12.93□□□□□ -0.34
Vps54-202ENSMUST00000109578 Arpp21Q9DCB4 807 aa12.93□□□□□ -0.34
Vps54-202ENSMUST00000109578 Gimap8Q75N62 688 aa12.93□□□□□ -0.34
Vps54-202ENSMUST00000109578 MtrrQ8C1A3 696 aa12.93□□□□□ -0.34
Vps54-202ENSMUST00000109578 McamQ8R2Y2 648 aaKnown RBP12.93□□□□□ -0.34
Vps54-202ENSMUST00000109578 Uba5Q8VE47 403 aa12.93□□□□□ -0.34
Vps54-202ENSMUST00000109578 Q91WD4 421 aa12.93□□□□□ -0.34
Vps54-202ENSMUST00000109578 Cep112Q5PR68 954 aa12.93□□□□□ -0.34
Vps54-202ENSMUST00000109578 Tango6Q8C3S2 1079 aa12.93□□□□□ -0.34
Vps54-202ENSMUST00000109578 Znf131Q8K3J5 619 aa12.93□□□□□ -0.34
Vps54-202ENSMUST00000109578 Eps8l1Q8R5F8 716 aa12.93□□□□□ -0.34
Vps54-202ENSMUST00000109578 RarsQ9D0I9 660 aaKnown RBP12.93□□□□□ -0.34
Vps54-202ENSMUST00000109578 Mss51Q9D5Z5 446 aa12.93□□□□□ -0.34
Vps54-202ENSMUST00000109578 Pex3Q9QXY9 372 aa12.93□□□□□ -0.34
Vps54-202ENSMUST00000109578 Myh4Q5SX39 1939 aa12.93□□□□□ -0.34
Vps54-202ENSMUST00000109578 Kcna1P16388 495 aa12.93□□□□□ -0.34
Vps54-202ENSMUST00000109578 Vgll3P85442 326 aa12.93□□□□□ -0.34
Vps54-202ENSMUST00000109578 FntaQ61239 377 aa12.93□□□□□ -0.34
Vps54-202ENSMUST00000109578 Fchsd1Q6PFY1 688 aa12.93□□□□□ -0.34
Vps54-202ENSMUST00000109578 Tmem63cQ8CBX0 802 aa12.93□□□□□ -0.34
Vps54-202ENSMUST00000109578 Krt82Q99M74 516 aa12.93□□□□□ -0.34
Vps54-202ENSMUST00000109578 Ddx23D3Z0M9 819 aaKnown RBP12.92□□□□□ -0.34
Vps54-202ENSMUST00000109578 DlatQ8BMF4 642 aa12.92□□□□□ -0.34
Vps54-202ENSMUST00000109578 Cd2apQ9JLQ0 637 aa12.92□□□□□ -0.34
Vps54-202ENSMUST00000109578 Cnbd1B1AWM0 430 aa12.92□□□□□ -0.34
Vps54-202ENSMUST00000109578 Krt78E9Q0F0 1068 aa12.92□□□□□ -0.34
Vps54-202ENSMUST00000109578 Enc1O35709 589 aa12.92□□□□□ -0.34
Vps54-202ENSMUST00000109578 Aggf1Q7TN31 711 aa12.92□□□□□ -0.34
Vps54-202ENSMUST00000109578 Fermt2Q8CIB5 680 aa12.92□□□□□ -0.34
Vps54-202ENSMUST00000109578 Abhd2Q9QXM0 425 aa12.92□□□□□ -0.34
Vps54-202ENSMUST00000109578 Myh13B1AR69 1938 aa12.92□□□□□ -0.34
Vps54-202ENSMUST00000109578 Ccdc34Q3UI66 367 aa12.92□□□□□ -0.34
Vps54-202ENSMUST00000109578 Ell2Q3UKU1 639 aa12.92□□□□□ -0.34
Vps54-202ENSMUST00000109578 Tmtc2Q56A06 836 aa12.92□□□□□ -0.34
Vps54-202ENSMUST00000109578 Scn11aQ9R053 1765 aa12.92□□□□□ -0.34
Vps54-202ENSMUST00000109578 Nck2O55033 380 aa12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Smarcc1P97496 1104 aa12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Tcp11Q01755 566 aa12.91□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 55.8 ms