RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Fam89aQ14BJ1 175 aa12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Tsr1Q5SWD9 803 aa12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Rbm12b2Q66JV4 834 aaKnown RBP12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Skor1Q8BX46 964 aa12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Fam161bQ8CB59 589 aa12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Capn12Q9ER56 720 aa12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Fbf1A2A870 1173 aa12.61□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Pde4dQ01063 747 aa12.61□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Olfr119Q7TRJ5 321 aa12.61□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Fermt2Q8CIB5 680 aa12.61□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Stn1Q8K2X3 378 aa12.61□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Usp53P15975 1069 aa12.61□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Foxd1Q61345 456 aa12.61□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Txndc5Q91W90 417 aa12.61□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Grin3bQ91ZU9 1003 aa12.61□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Nol7Q9D7Z3 254 aaKnown RBP12.61□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Spef2Q8C9J3 1734 aa12.61□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Gucy1a2F8VQK3 730 aa12.61□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Kiaa1468Q148V7 1216 aa12.61□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Hps6Q8BLY7 805 aa12.61□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Rbm5Q91YE7 815 aaKnown RBP12.61□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Kif23E9Q5G3 953 aa12.61□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Ifit1bl2Q3U687 466 aa12.61□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Gna15P30678 374 aa12.6□□□□□ -0.39
Topbp1-201ENSMUST00000035164 NeblQ0II04 452 aa12.6□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Wdr44Q6NVE8 915 aa12.6□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Dnajc5gQ8C632 165 aa12.6□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Mettl5Q8K1A0 209 aa12.6□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Q9D5Q8 446 aa12.6□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Clcn6O35454 870 aa12.6□□□□□ -0.39
Topbp1-201ENSMUST00000035164 IkbkbO88351 757 aa12.6□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Fxr1Q61584 677 aaKnown RBP12.6□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Adcy2Q80TL1 1090 aa12.6□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Nmt2O70311 529 aa12.6□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Specc1Q5SXY1 1067 aa12.6□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Tbx2Q60707 711 aa12.6□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Krt74Q6IFZ9 495 aa12.6□□□□□ -0.39
Topbp1-201ENSMUST00000035164 HelbQ6NVF4 1074 aa12.6□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Slain2Q8CI08 581 aa12.6□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Uba5Q8VE47 403 aa12.6□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Syf2Q9D198 242 aaKnown RBP12.6□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Coro7Q9D2V7 922 aa12.6□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Sgpp1Q9JI99 430 aa12.6□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Dynll1P63168 89 aa12.6□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Kcnd1Q03719 651 aa12.6□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Ccdc172Q810N9 267 aa12.6□□□□□ -0.39
Topbp1-201ENSMUST00000035164 DlatQ8BMF4 642 aa12.6□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Naa25Q8BWZ3 972 aa12.6□□□□□ -0.39
Topbp1-201ENSMUST00000035164 4930449I24RikQ9D5E3 319 aa12.6□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Topbp1Q6ZQF0 1515 aa12.59□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Ddx23D3Z0M9 819 aaKnown RBP12.59□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Pdrg1P59048 133 aa12.59□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Olfr121Q5CZY0 321 aa12.59□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Letm1Q9Z2I0 738 aa12.59□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Lrrfip1Q3UZ39 729 aaKnown RBP12.59□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Slc44a1Q6X893 653 aa12.59□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Clca2Q8BG22 942 aa12.59□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Spc24Q9D083 201 aa12.59□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Ube3bQ9ES34 1070 aa12.59□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Mroh6V9GX81 722 aa12.59□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Carmil3Q3UFQ8 1375 aa12.59□□□□□ -0.39
Topbp1-201ENSMUST00000035164 1700017N19RikA0A087WPJ1 469 aa12.59□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Atp8b5A3FIN4 1183 aa12.59□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Atp6v1aP50516 617 aaKnown RBP12.59□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Irx1P81068 480 aa12.59□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Usp50Q6P8X6 390 aa12.59□□□□□ -0.39
Topbp1-201ENSMUST00000035164 RgmbQ7TQ33 436 aa12.59□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Kiaa1210E9Q0C6 1637 aa12.59□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Usp32F8VPZ3 1604 aa12.59□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Fbxl16A2RT62 479 aa12.59□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Cd3dP04235 173 aa12.59□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Opa1P58281 960 aa12.59□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Calcoco1Q8CGU1 691 aa12.59□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Commd10Q8JZY2 202 aa12.59□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Abcf2Q99LE6 628 aaKnown RBP12.59□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Irs4Q9Z0Y7 1216 aa12.59□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Gm30191A0A0U1RNT7 187 aa12.58□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Usp5P56399 858 aaKnown RBP12.58□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Hmgb1P63158 215 aaKnown RBP12.58□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Atp8b1Q148W0 1251 aa12.58□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Jade3Q6IE82 823 aa12.58□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Fam102bQ8BQS4 339 aa12.58□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Cep95Q8BVV7 827 aa12.58□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Lrrc41Q8K1C9 807 aa12.58□□□□□ -0.39
Topbp1-201ENSMUST00000035164 RarsQ9D0I9 660 aaKnown RBP12.58□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Armc9Q9D2I5 817 aa12.58□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Capn15Q9JLG8 1095 aa12.58□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Peg12Q9WVA7 283 aa12.58□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Scgb2b18A0A087WPA9 112 aa12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Gdap1O88741 358 aa12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 RaraP11416 462 aa12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Naa35Q6PHQ8 725 aa12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Miga2Q8BK03 593 aa12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Eif3cQ8R1B4 911 aaKnown RBP12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Eif4a3Q91VC3 411 aaKnown RBP12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Ciao1Q99KN2 339 aa12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Chd1P40201 1711 aa12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Ttc13A0A1L1SSC7 844 aa12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Izumo3A6PWV3 263 aa12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Cyp3a25O09158 503 aa12.58□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms