RNA–Protein interactions for RNA: ENSMUST00000029414.11

Ssr3-201, Transcript of Translocon-associated protein subunit gamma, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-201ENSMUST00000029414 Fbxo28Q8BIG4 368 aa9.38□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Dpp9Q8BVG4 862 aa9.38□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Gmcl1Q920G9 524 aa9.38□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Trmt112Q9DCG9 125 aa9.38□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Sh2b2Q9JID9 621 aa9.38□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Dclk1Q9JLM8 756 aa9.38□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Nlrc5C3VPR6 1915 aa9.37□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Mia3Q8BI84 1930 aa9.37□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Btg4O70552 250 aa9.37□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Hoxc6P10629 235 aa9.37□□□□□ -0.91
Ssr3-201ENSMUST00000029414 MecomP14404 1042 aa9.37□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Cfap52Q5F201 620 aa9.37□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Tpd52Q62393 224 aa9.37□□□□□ -0.91
Ssr3-201ENSMUST00000029414 U2af1l4Q8BGJ9 220 aa9.37□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Rnf41Q8BH75 317 aa9.37□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Senp7Q8BUH8 1037 aa9.37□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Fez1Q8K0X8 392 aa9.37□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Bst2Q8R2Q8 172 aa9.37□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Ivns1abpQ920Q8 642 aa9.37□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Tjp3Q9QXY1 905 aa9.37□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Nmt2O70311 529 aa9.37□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Alppl2P24823 529 aa9.37□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Sparcl1P70663 650 aa9.37□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Zfp957Q3UT76 567 aa9.37□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Hand2Q61039 217 aa9.37□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Ecm1Q61508 559 aa9.37□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Ube2q1Q7TSS2 422 aa9.37□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Liat1Q810M6 228 aa9.37□□□□□ -0.91
Ssr3-201ENSMUST00000029414 QarsQ8BML9 775 aa9.37□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Lrrfip2Q91WK0 415 aa9.37□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Nop2Q922K7 793 aaKnown RBP9.37□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Tll2Q9WVM6 1012 aa9.37□□□□□ -0.91
Ssr3-201ENSMUST00000029414 RptorQ8K4Q0 1335 aa9.37□□□□□ -0.91
Ssr3-201ENSMUST00000029414 AoahO35298 574 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Ercc3P49135 783 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Cntnap5bQ0V8T8 1292 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Stxbp3Q60770 592 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Kank4Q6P9J5 1016 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 GlmnQ8BZM1 596 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 MyripQ8K3I4 856 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Ttc8Q8VD72 515 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Kif18aQ91WD7 886 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Tmx2Q9D710 295 aaKnown RBP9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 EspnQ9ET47 871 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Fkbp1bQ9Z2I2 108 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Ripor3A1L3T7 938 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Wfdc16A2A5H4 111 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Pnmal2G3X9N3 661 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Tph1P17532 447 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Vgll2Q8BGW8 322 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 DnerQ8JZM4 737 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Dlk2Q8K1E3 382 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Nr3c2Q8VII8 978 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Tdrd3Q91W18 743 aaKnown RBP9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Q9D2X8 372 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Chmp5Q9D7S9 219 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Xrn2Q9DBR1 951 aaKnown RBP9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Kiaa0100Q5SYL3 2234 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Casp12O08736 419 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 SqleP52019 572 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Cyp2c39P56656 490 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Zbtb9Q8CDC7 459 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Cnot6lQ8VEG6 555 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Dnajc17Q91WT4 303 aa9.36□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Pitpnm1O35954 1243 aa9.35□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Copb2O55029 905 aa9.35□□□□□ -0.91
Ssr3-201ENSMUST00000029414 TxnP10639 105 aaKnown RBP9.35□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Nploc4P60670 608 aa9.35□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Ccdc174Q3U155 467 aa9.35□□□□□ -0.91
Ssr3-201ENSMUST00000029414 DlatQ8BMF4 642 aa9.35□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Gprasp2Q8BUY8 826 aa9.35□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Morc2bQ8C5W4 1022 aa9.35□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Riox2Q8CD15 465 aa9.35□□□□□ -0.91
Ssr3-201ENSMUST00000029414 DaglbQ91WC9 669 aa9.35□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Rnf19bA2A7Q9 732 aa9.35□□□□□ -0.91
Ssr3-201ENSMUST00000029414 AU015836B2RUM3 263 aa9.35□□□□□ -0.91
Ssr3-201ENSMUST00000029414 LdhbP16125 334 aaKnown RBP9.35□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Stat3P42227 770 aaKnown RBP9.35□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Usp5P56399 858 aaKnown RBP9.35□□□□□ -0.91
Ssr3-201ENSMUST00000029414 PcQ05920 1178 aa9.35□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Pgrmc2Q80UU9 217 aaKnown RBP9.35□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Cyp26b1Q811W2 512 aa9.35□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Speer4f2E9Q366 295 aa9.34□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Hmgcs2P54869 508 aa9.34□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Cnnm2Q3TWN3 875 aa9.34□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Atp13a3Q5XF89 1219 aa9.34□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Spty2d1Q68FG3 682 aa9.34□□□□□ -0.91
Ssr3-201ENSMUST00000029414 ImmtQ8CAQ8 757 aaKnown RBP9.34□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Champ1Q8K327 802 aaKnown RBP9.34□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Smc1bQ920F6 1248 aa9.34□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Dbr1Q923B1 550 aa9.34□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Mxra8Q9DBV4 442 aa9.34□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Prl7a2O54831 253 aa9.34□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Btbd1P58544 488 aa9.34□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Tbc1d10bQ8BHL3 798 aa9.34□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Pof1bQ8K4L4 587 aa9.34□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Ero1aQ8R180 464 aa9.34□□□□□ -0.91
Ssr3-201ENSMUST00000029414 PdhbQ9D051 359 aa9.34□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Tmem47Q9JJG6 181 aa9.34□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Col5a3Q9JLI2 1739 aa9.34□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms