RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Calm1P0DP26 149 aaKnown RBP20.76■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Calm2P0DP27 149 aaKnown RBP20.76■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Calm3P0DP28 149 aaKnown RBP20.76■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Uba5Q8VE47 403 aa20.76■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Calml3Q9D6P8 149 aa20.76■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Tekt3Q6X6Z7 490 aa20.76■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Sash3Q8K352 380 aa20.76■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Brms1Q99N20 246 aa20.76■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Cfap45Q9D9U9 551 aa20.76■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 A0A1L1SQF0 893 aa20.75■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Serpina16D3Z660 418 aa20.75■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Slurp2P0DP59 97 aa20.75■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Mdh1P14152 334 aa20.75■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Snd1Q78PY7 910 aaKnown RBP20.75■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Ctdp1Q7TSG2 960 aa20.75■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Q8C5C9 218 aa20.75■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Ppfibp1Q8C8U0 969 aaKnown RBP20.75■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Klhl10Q9D5V2 608 aa20.75■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Cd2apQ9JLQ0 637 aa20.75■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 AmfrQ9R049 643 aa20.75■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Rexo5D3YW29 759 aa20.75■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Eva1cP58659 440 aa20.75■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Cnga2Q62398 664 aa20.75■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Rbm12b2Q66JV4 834 aaKnown RBP20.75■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Rrp1bQ91YK2 724 aaKnown RBP20.75■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Pla2g12bQ99P27 195 aa20.75■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Rgs22G3UYX5 1258 aa20.74■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Rps8P62242 208 aaKnown RBP20.74■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Ttll12Q3UDE2 639 aa20.74■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Gm5592Q3V0A6 857 aa20.74■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 TxlnaQ6PAM1 554 aaKnown RBP20.74■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Zc3h6Q8BYK8 1177 aa20.74■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Eno4Q8C042 619 aa20.74■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Eps8l1Q8R5F8 716 aa20.74■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Prc1Q99K43 603 aaKnown RBP20.74■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Mmtag2Q99LX5 260 aaKnown RBP20.74■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 MicalclQ9D5U9 680 aa20.74■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Mss51Q9D5Z5 446 aa20.74■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Fam217aQ9D9W6 419 aa20.74■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Arfgef1G3X9K3 1846 aaKnown RBP20.74■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Kif23E9Q5G3 953 aa20.74■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Tmem132bF7BAB2 1078 aa20.74■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Capn2O08529 700 aa20.74■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 LbrQ3U9G9 626 aaKnown RBP20.74■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Pramel6Q810Y9 485 aa20.74■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Cdc23Q8BGZ4 597 aa20.74■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Hgh1Q8C3I8 393 aa20.74■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Uchl5Q9WUP7 329 aa20.74■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Smc1aQ9CU62 1233 aaKnown RBP20.73■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Mad2l2Q9D752 211 aa20.73■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 AllcQ9JHX6 414 aa20.73■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Map3k15A2AQW0 1331 aa20.73■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Gm28042B7ZCM9 1014 aa20.73■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Lrrc6O88978 473 aa20.73■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Mkrn3Q60764 544 aa20.73■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Smc1bQ920F6 1248 aa20.73■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 RarsQ9D0I9 660 aaKnown RBP20.73■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Egfl6Q9JJZ5 550 aa20.73■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Epb41l3Q9WV92 929 aa20.73■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Zmym2Q9CU65 1376 aa20.73■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Meis3P97368 378 aa20.72■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Emc10Q3TAS6 258 aa20.72■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Rc3h1Q4VGL6 1130 aaKnown RBP20.72■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 MtrrQ8C1A3 696 aa20.72■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Trim29Q8R2Q0 587 aa20.72■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Q91WD4 421 aa20.72■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Prl2c5Q9JLV9 222 aa20.72■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Abhd2Q9QXM0 425 aa20.72■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Sorbs3Q9R1Z8 733 aa20.72■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Snapc4Q8BP86 1333 aa20.72■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 PpardP35396 440 aa20.72■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 ItpripQ3TNL8 555 aa20.72■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Tmtc2Q56A06 836 aa20.72■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Fchsd1Q6PFY1 688 aa20.72■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Tacc1Q6Y685 774 aa20.72■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 DlatQ8BMF4 642 aa20.72■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Ccdc14Q8K2J4 934 aa20.72■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Tpcn1Q9EQJ0 817 aa20.72■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Nfil3O08750 462 aa20.71■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Ctnna3Q65CL1 895 aa20.71■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Cnnm4Q69ZF7 771 aa20.71■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Cyp4f39Q8BGU0 532 aa20.71■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Hpcal4Q8BGZ1 191 aa20.71■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Slc51aQ8R000 340 aa20.71■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Dact1Q8R4A3 778 aa20.71■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Kat6bQ8BRB7 1872 aa20.71■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Krt78E9Q0F0 1068 aa20.71■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Zmynd15Q8C0R7 736 aa20.71■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Bicdl2Q8CHW5 507 aa20.71■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Myl6bQ8CI43 207 aa20.71■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Slc14a2Q8R4T9 930 aa20.71■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Arpp21Q9DCB4 807 aa20.71■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Nr2e3Q9QXZ7 395 aa20.71■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Ddx23D3Z0M9 819 aaKnown RBP20.71■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Akr1c19G3X9Y6 323 aa20.71■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 LrmpQ60664 539 aa20.71■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Igbp1Q61249 340 aa20.71■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Gpt2Q8BGT5 522 aa20.71■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Tmem63cQ8CBX0 802 aa20.71■□□□□ 0.91
Ccdc3-201ENSMUST00000027988 Pex3Q9QXY9 372 aa20.71■□□□□ 0.91
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms