RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 NTSR2O95665 410 aa15.7■□□□□ 0.1
PHGDH-233ENST00000642021 GYPCP04921 128 aa15.7■□□□□ 0.1
PHGDH-233ENST00000642021 XBP1P17861 261 aa15.7■□□□□ 0.1
PHGDH-233ENST00000642021 CYP2C19P33261 490 aa15.7■□□□□ 0.1
PHGDH-233ENST00000642021 XDHP47989 1333 aa15.7■□□□□ 0.1
PHGDH-233ENST00000642021 CCDC34Q96HJ3 373 aa15.7■□□□□ 0.1
PHGDH-233ENST00000642021 GSDMAQ96QA5 445 aa15.7■□□□□ 0.1
PHGDH-233ENST00000642021 NIP7Q9Y221 180 aaKnown RBP eCLIP15.7■□□□□ 0.1
PHGDH-233ENST00000642021 RTL9Q8NET4 1388 aa15.7■□□□□ 0.1
PHGDH-233ENST00000642021 A0A0G2JS52 829 aa15.7■□□□□ 0.1
PHGDH-233ENST00000642021 MFAP3LO75121 409 aa15.7■□□□□ 0.1
PHGDH-233ENST00000642021 CDC25AP30304 524 aa15.7■□□□□ 0.1
PHGDH-233ENST00000642021 CCT6AP40227 531 aaKnown RBP15.7■□□□□ 0.1
PHGDH-233ENST00000642021 IL17AQ16552 155 aa15.7■□□□□ 0.1
PHGDH-233ENST00000642021 CATIPQ7Z7H3 387 aa15.7■□□□□ 0.1
PHGDH-233ENST00000642021 ABCA3Q99758 1704 aa15.69■□□□□ 0.1
PHGDH-233ENST00000642021 DISP2A7MBM2 1401 aa15.69■□□□□ 0.1
PHGDH-233ENST00000642021 CRKLP46109 303 aaKnown RBP15.69■□□□□ 0.1
PHGDH-233ENST00000642021 PPP2R5BQ15173 497 aa15.69■□□□□ 0.1
PHGDH-233ENST00000642021 TTC38Q5R3I4 469 aa15.69■□□□□ 0.1
PHGDH-233ENST00000642021 SRBD1Q8N5C6 995 aaKnown RBP15.69■□□□□ 0.1
PHGDH-233ENST00000642021 RABGGTAQ92696 567 aa15.69■□□□□ 0.1
PHGDH-233ENST00000642021 FERMT2Q96AC1 680 aa15.69■□□□□ 0.1
PHGDH-233ENST00000642021 COL1A1P02452 1464 aaPredicted RBP15.69■□□□□ 0.1
PHGDH-233ENST00000642021 E2F4Q16254 413 aa15.69■□□□□ 0.1
PHGDH-233ENST00000642021 C3orf67Q6ZVT6 689 aa15.69■□□□□ 0.1
PHGDH-233ENST00000642021 FUT8Q9BYC5 575 aa15.69■□□□□ 0.1
PHGDH-233ENST00000642021 PUF60Q9UHX1 559 aaKnown RBP15.69■□□□□ 0.1
PHGDH-233ENST00000642021 CTNND2Q9UQB3 1225 aa15.69■□□□□ 0.1
PHGDH-233ENST00000642021 ZNF804BA4D1E1 1349 aa15.68■□□□□ 0.1
PHGDH-233ENST00000642021 ZNF335Q9H4Z2 1342 aaPredicted RBP15.68■□□□□ 0.1
PHGDH-233ENST00000642021 CT47A1Q5JQC4 288 aaPredicted RBP15.68■□□□□ 0.1
PHGDH-233ENST00000642021 CTR9Q6PD62 1173 aa15.68■□□□□ 0.1
PHGDH-233ENST00000642021 RASGRP2Q7LDG7 609 aa15.68■□□□□ 0.1
PHGDH-233ENST00000642021 ACRBPQ8NEB7 543 aa15.68■□□□□ 0.1
PHGDH-233ENST00000642021 CCDC87Q9NVE4 849 aa15.68■□□□□ 0.1
PHGDH-233ENST00000642021 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.68■□□□□ 0.1
PHGDH-233ENST00000642021 BAZ2BQ9UIF8 2168 aaKnown RBP15.68■□□□□ 0.1
PHGDH-233ENST00000642021 BCL9LQ86UU0 1499 aa15.68■□□□□ 0.1
PHGDH-233ENST00000642021 NHSL1Q5SYE7 1610 aa15.68■□□□□ 0.1
PHGDH-233ENST00000642021 ATP8B1O43520 1251 aa15.68■□□□□ 0.1
PHGDH-233ENST00000642021 ATP2C1P98194 919 aaPredicted RBP15.68■□□□□ 0.1
PHGDH-233ENST00000642021 KRT31Q15323 416 aa15.68■□□□□ 0.1
PHGDH-233ENST00000642021 ZNF569Q5MCW4 686 aa15.68■□□□□ 0.1
PHGDH-233ENST00000642021 TMTC3Q6ZXV5 915 aa15.68■□□□□ 0.1
PHGDH-233ENST00000642021 GOLGA1Q92805 767 aa15.68■□□□□ 0.1
PHGDH-233ENST00000642021 USP17L12C9JPN9 530 aa15.67■□□□□ 0.1
PHGDH-233ENST00000642021 USP17L21D6R901 530 aa15.67■□□□□ 0.1
PHGDH-233ENST00000642021 ATP6V1AP38606 617 aa15.67■□□□□ 0.1
PHGDH-233ENST00000642021 TXLNAP40222 546 aa15.67■□□□□ 0.1
PHGDH-233ENST00000642021 ERVK-24P63145 666 aa15.67■□□□□ 0.1
PHGDH-233ENST00000642021 ST5P78524 1137 aa15.67■□□□□ 0.1
PHGDH-233ENST00000642021 PIK3AP1Q6ZUJ8 805 aa15.67■□□□□ 0.1
PHGDH-233ENST00000642021 ZBTB9Q96C00 473 aa15.67■□□□□ 0.1
PHGDH-233ENST00000642021 VPS16Q9H269 839 aa15.67■□□□□ 0.1
PHGDH-233ENST00000642021 ARFGAP3Q9NP61 516 aa15.67■□□□□ 0.1
PHGDH-233ENST00000642021 OAS2P29728 719 aaKnown RBP15.67■□□□□ 0.1
PHGDH-233ENST00000642021 SMC1AQ14683 1233 aaKnown RBP15.67■□□□□ 0.1
PHGDH-233ENST00000642021 FAM47AQ5JRC9 791 aa15.67■□□□□ 0.1
PHGDH-233ENST00000642021 IQCA1Q86XH1 822 aa15.67■□□□□ 0.1
PHGDH-233ENST00000642021 CTAGE1Q96RT6 745 aa15.67■□□□□ 0.1
PHGDH-233ENST00000642021 CDC5LQ99459 802 aaKnown RBP15.67■□□□□ 0.1
PHGDH-233ENST00000642021 NAA15Q9BXJ9 866 aaKnown RBP15.67■□□□□ 0.1
PHGDH-233ENST00000642021 MAPK8IP1Q9UQF2 711 aa15.67■□□□□ 0.1
PHGDH-233ENST00000642021 CNTNAP5Q8WYK1 1306 aa15.66■□□□□ 0.1
PHGDH-233ENST00000642021 MYH2Q9UKX2 1941 aa15.66■□□□□ 0.1
PHGDH-233ENST00000642021 FGRP09769 529 aa15.66■□□□□ 0.1
PHGDH-233ENST00000642021 CHMP4BP1P59074 171 aa15.66■□□□□ 0.1
PHGDH-233ENST00000642021 ITPK1Q13572 414 aa15.66■□□□□ 0.1
PHGDH-233ENST00000642021 RRAGBQ5VZM2 374 aa15.66■□□□□ 0.1
PHGDH-233ENST00000642021 PDXDC2PQ6P474 469 aa15.66■□□□□ 0.1
PHGDH-233ENST00000642021 SRGAP1Q7Z6B7 1085 aa15.66■□□□□ 0.1
PHGDH-233ENST00000642021 ACSBG1Q96GR2 724 aa15.66■□□□□ 0.1
PHGDH-233ENST00000642021 ANKZF1Q9H8Y5 726 aa15.66■□□□□ 0.1
PHGDH-233ENST00000642021 LRRC10BA6NIK2 292 aa15.66■□□□□ 0.1
PHGDH-233ENST00000642021 KIF5CO60282 957 aa15.66■□□□□ 0.1
PHGDH-233ENST00000642021 MCM7P33993 719 aa15.66■□□□□ 0.1
PHGDH-233ENST00000642021 FAM193AP78312 1265 aa15.66■□□□□ 0.1
PHGDH-233ENST00000642021 FILIP1LQ4L180 1135 aa15.66■□□□□ 0.1
PHGDH-233ENST00000642021 PARP10Q53GL7 1025 aa15.66■□□□□ 0.1
PHGDH-233ENST00000642021 CREBRFQ8IUR6 639 aa15.66■□□□□ 0.1
PHGDH-233ENST00000642021 RBM28Q9NW13 759 aaKnown RBP15.66■□□□□ 0.1
PHGDH-233ENST00000642021 CDC23Q9UJX2 597 aa15.66■□□□□ 0.1
PHGDH-233ENST00000642021 SEMA3EO15041 775 aa15.65■□□□□ 0.1
PHGDH-233ENST00000642021 N4BP3O15049 544 aa15.65■□□□□ 0.1
PHGDH-233ENST00000642021 GYS2P54840 703 aa15.65■□□□□ 0.1
PHGDH-233ENST00000642021 LONRF2Q1L5Z9 754 aa15.65■□□□□ 0.1
PHGDH-233ENST00000642021 SLC35F6Q8N357 371 aa15.65■□□□□ 0.1
PHGDH-233ENST00000642021 BRIP1Q9BX63 1249 aa15.65■□□□□ 0.1
PHGDH-233ENST00000642021 BMP15O95972 392 aa15.65■□□□□ 0.1
PHGDH-233ENST00000642021 IQUBQ8NA54 791 aa15.65■□□□□ 0.1
PHGDH-233ENST00000642021 FAM84BQ96KN1 310 aaPredicted RBP15.65■□□□□ 0.1
PHGDH-233ENST00000642021 BRMS1Q9HCU9 246 aa15.65■□□□□ 0.1
PHGDH-233ENST00000642021 TAB2Q9NYJ8 693 aa15.65■□□□□ 0.1
PHGDH-233ENST00000642021 LIMA1Q9UHB6 759 aaKnown RBP15.65■□□□□ 0.1
PHGDH-233ENST00000642021 CICQ96RK0 1608 aaPredicted RBP15.65■□□□□ 0.1
PHGDH-233ENST00000642021 CCDC66A2RUB6 948 aa15.64■□□□□ 0.09
PHGDH-233ENST00000642021 FECHP22830 423 aa15.64■□□□□ 0.09
PHGDH-233ENST00000642021 KLRK1P26718 216 aa15.64■□□□□ 0.09
PHGDH-233ENST00000642021 TAF3Q5VWG9 929 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms