RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 TJAP1Q5JTD0 557 aa9.01□□□□□ -0.97
PHGDH-225ENST00000641720 SLC39A5Q6ZMH5 540 aa9.01□□□□□ -0.97
PHGDH-225ENST00000641720 TBC1D9Q6ZT07 1266 aa9.01□□□□□ -0.97
PHGDH-225ENST00000641720 SMC5Q8IY18 1101 aa9.01□□□□□ -0.97
PHGDH-225ENST00000641720 OTUD7AQ8TE49 926 aaPredicted RBP9.01□□□□□ -0.97
PHGDH-225ENST00000641720 SH3RF3Q8TEJ3 882 aaPredicted RBP9.01□□□□□ -0.97
PHGDH-225ENST00000641720 BADQ92934 168 aa9.01□□□□□ -0.97
PHGDH-225ENST00000641720 NEUROD6Q96NK8 337 aa9.01□□□□□ -0.97
PHGDH-225ENST00000641720 LRRCC1Q9C099 1032 aa9.01□□□□□ -0.97
PHGDH-225ENST00000641720 CCDC8Q9H0W5 538 aaPredicted RBP9.01□□□□□ -0.97
PHGDH-225ENST00000641720 BCL11AQ9H165 835 aa9.01□□□□□ -0.97
PHGDH-225ENST00000641720 RWDD1Q9H446 243 aaPredicted RBP9.01□□□□□ -0.97
PHGDH-225ENST00000641720 GNL3LQ9NVN8 582 aaKnown RBP9.01□□□□□ -0.97
PHGDH-225ENST00000641720 ABCF2Q9UG63 623 aa9.01□□□□□ -0.97
PHGDH-225ENST00000641720 AKAP2Q9Y2D5 859 aa9.01□□□□□ -0.97
PHGDH-225ENST00000641720 RABGAP1Q9Y3P9 1069 aa9.01□□□□□ -0.97
PHGDH-225ENST00000641720 FLT1P17948 1338 aa9.01□□□□□ -0.97
PHGDH-225ENST00000641720 SLC15A5A6NIM6 579 aa9□□□□□ -0.97
PHGDH-225ENST00000641720 SPDYE16A6NNV3 312 aaPredicted RBP9□□□□□ -0.97
PHGDH-225ENST00000641720 C19orf81C9J6K1 198 aa9□□□□□ -0.97
PHGDH-225ENST00000641720 USP17L10C9JJH3 530 aa9□□□□□ -0.97
PHGDH-225ENST00000641720 TNFRSF10AO00220 468 aa9□□□□□ -0.97
PHGDH-225ENST00000641720 FOSL2P15408 326 aa9□□□□□ -0.97
PHGDH-225ENST00000641720 CYP2C19P33261 490 aa9□□□□□ -0.97
PHGDH-225ENST00000641720 GUCY1A2P33402 732 aa9□□□□□ -0.97
PHGDH-225ENST00000641720 PLA2G5P39877 138 aa9□□□□□ -0.97
PHGDH-225ENST00000641720 PPP4CP60510 307 aa9□□□□□ -0.97
PHGDH-225ENST00000641720 TRIM60Q495X7 471 aa9□□□□□ -0.97
PHGDH-225ENST00000641720 GJC2Q5T442 439 aaPredicted RBP9□□□□□ -0.97
PHGDH-225ENST00000641720 AS3MTQ9HBK9 375 aa9□□□□□ -0.97
PHGDH-225ENST00000641720 TRIP12Q14669 1992 aaPredicted RBP8.99□□□□□ -0.97
PHGDH-225ENST00000641720 MSCO60682 206 aa8.99□□□□□ -0.97
PHGDH-225ENST00000641720 GDF11O95390 407 aa8.99□□□□□ -0.97
PHGDH-225ENST00000641720 RASIP1Q5U651 963 aa8.99□□□□□ -0.97
PHGDH-225ENST00000641720 TSHZ3Q63HK5 1081 aa8.99□□□□□ -0.97
PHGDH-225ENST00000641720 TATDN1Q6P1N9 297 aa8.99□□□□□ -0.97
PHGDH-225ENST00000641720 CATSPERGQ6ZRH7 1159 aa8.99□□□□□ -0.97
PHGDH-225ENST00000641720 ERICH6Q7L0X2 663 aa8.99□□□□□ -0.97
PHGDH-225ENST00000641720 SLF2Q8IX21 1173 aa8.99□□□□□ -0.97
PHGDH-225ENST00000641720 GTF3C2Q8WUA4 911 aaPredicted RBP8.99□□□□□ -0.97
PHGDH-225ENST00000641720 EDC3Q96F86 508 aaKnown RBP8.99□□□□□ -0.97
PHGDH-225ENST00000641720 LBHD1Q9BQE6 289 aaPredicted RBP8.99□□□□□ -0.97
PHGDH-225ENST00000641720 PAGR1Q9BTK6 254 aa8.99□□□□□ -0.97
PHGDH-225ENST00000641720 GINM1Q9NU53 330 aa8.99□□□□□ -0.97
PHGDH-225ENST00000641720 PI4KBQ9UBF8 816 aa8.99□□□□□ -0.97
PHGDH-225ENST00000641720 NDUFB9Q9Y6M9 179 aa8.99□□□□□ -0.97
PHGDH-225ENST00000641720 KIAA0355O15063 1070 aa8.98□□□□□ -0.97
PHGDH-225ENST00000641720 COBLO75128 1261 aa8.98□□□□□ -0.97
PHGDH-225ENST00000641720 VCAM1P19320 739 aa8.98□□□□□ -0.97
PHGDH-225ENST00000641720 NUCB1Q02818 461 aa8.98□□□□□ -0.97
PHGDH-225ENST00000641720 ADGRE1Q14246 886 aa8.98□□□□□ -0.97
PHGDH-225ENST00000641720 LRRC41Q15345 812 aa8.98□□□□□ -0.97
PHGDH-225ENST00000641720 FAM47AQ5JRC9 791 aa8.98□□□□□ -0.97
PHGDH-225ENST00000641720 GORABQ5T7V8 394 aa8.98□□□□□ -0.97
PHGDH-225ENST00000641720 ANKRD45Q5TZF3 282 aa8.98□□□□□ -0.97
PHGDH-225ENST00000641720 OLFML2BQ68BL8 750 aa8.98□□□□□ -0.97
PHGDH-225ENST00000641720 SPTY2D1Q68D10 685 aaPredicted RBP8.98□□□□□ -0.97
PHGDH-225ENST00000641720 B4GALNT3Q6L9W6 998 aa8.98□□□□□ -0.97
PHGDH-225ENST00000641720 TEX11Q8IYF3 940 aa8.98□□□□□ -0.97
PHGDH-225ENST00000641720 CLASRPQ8N2M8 674 aaKnown RBP8.98□□□□□ -0.97
PHGDH-225ENST00000641720 SPATA5Q8NB90 893 aa8.98□□□□□ -0.97
PHGDH-225ENST00000641720 SYMPKQ92797 1274 aaKnown RBP8.98□□□□□ -0.97
PHGDH-225ENST00000641720 LNPKQ9C0E8 428 aa8.98□□□□□ -0.97
PHGDH-225ENST00000641720 ATP11BQ9Y2G3 1177 aa8.98□□□□□ -0.97
PHGDH-225ENST00000641720 SYNGAP1Q96PV0 1343 aa8.98□□□□□ -0.97
PHGDH-225ENST00000641720 SALL3Q9BXA9 1300 aa8.98□□□□□ -0.97
PHGDH-225ENST00000641720 SEPT4O43236 478 aa8.97□□□□□ -0.97
PHGDH-225ENST00000641720 IFIT2P09913 472 aaKnown RBP8.97□□□□□ -0.97
PHGDH-225ENST00000641720 DNAJB2P25686 324 aa8.97□□□□□ -0.97
PHGDH-225ENST00000641720 EVX2Q03828 476 aa8.97□□□□□ -0.97
PHGDH-225ENST00000641720 TLE2Q04725 743 aa8.97□□□□□ -0.97
PHGDH-225ENST00000641720 KIAA1755Q5JYT7 1200 aa8.97□□□□□ -0.97
PHGDH-225ENST00000641720 TTC39AQ5SRH9 613 aa8.97□□□□□ -0.97
PHGDH-225ENST00000641720 ANO1Q5XXA6 986 aa8.97□□□□□ -0.97
PHGDH-225ENST00000641720 USP17L2Q6R6M4 530 aa8.97□□□□□ -0.97
PHGDH-225ENST00000641720 C16orf59Q7L2K0 433 aa8.97□□□□□ -0.97
PHGDH-225ENST00000641720 ACER1Q8TDN7 264 aa8.97□□□□□ -0.97
PHGDH-225ENST00000641720 KIAA1683Q9H0B3 1180 aa8.97□□□□□ -0.97
PHGDH-225ENST00000641720 DHX36Q9H2U1 1008 aaKnown RBP8.97□□□□□ -0.97
PHGDH-225ENST00000641720 SNRKQ9NRH2 765 aa8.97□□□□□ -0.97
PHGDH-225ENST00000641720 TMOD4Q9NZQ9 345 aa8.97□□□□□ -0.97
PHGDH-225ENST00000641720 PALD1Q9ULE6 856 aa8.97□□□□□ -0.97
PHGDH-225ENST00000641720 PHF24Q9UPV7 400 aa8.97□□□□□ -0.97
PHGDH-225ENST00000641720 SIP14410 1827 aa8.96□□□□□ -0.97
PHGDH-225ENST00000641720 SCN10AQ9Y5Y9 1956 aa8.96□□□□□ -0.98
PHGDH-225ENST00000641720 USP17L15C9J2P7 530 aa8.96□□□□□ -0.98
PHGDH-225ENST00000641720 USP17L13C9JLJ4 530 aa8.96□□□□□ -0.98
PHGDH-225ENST00000641720 USP17L11C9JVI0 530 aa8.96□□□□□ -0.98
PHGDH-225ENST00000641720 USP17L18D6R9N7 530 aa8.96□□□□□ -0.98
PHGDH-225ENST00000641720 USP17L22D6RA61 530 aa8.96□□□□□ -0.98
PHGDH-225ENST00000641720 USP17L17D6RBQ6 530 aa8.96□□□□□ -0.98
PHGDH-225ENST00000641720 USP17L19D6RCP7 530 aa8.96□□□□□ -0.98
PHGDH-225ENST00000641720 USP17L20D6RJB6 530 aa8.96□□□□□ -0.98
PHGDH-225ENST00000641720 UQCRFS1P1P0C7P4 283 aa8.96□□□□□ -0.98
PHGDH-225ENST00000641720 PDE4AP27815 886 aa8.96□□□□□ -0.98
PHGDH-225ENST00000641720 ADCYAP1R1P41586 468 aa8.96□□□□□ -0.98
PHGDH-225ENST00000641720 USP17L24Q0WX57 530 aa8.96□□□□□ -0.98
PHGDH-225ENST00000641720 MFSD14CQ5VZR4 134 aa8.96□□□□□ -0.98
PHGDH-225ENST00000641720 CHD1LQ86WJ1 897 aa8.96□□□□□ -0.98
PHGDH-225ENST00000641720 SKAP1Q86WV1 359 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms