RNA–Protein interactions for RNA: ENST00000640654.1

RTTN-220, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-220ENST00000640654 MIPEPQ99797 713 aa6.36□□□□□ -1.39
RTTN-220ENST00000640654 MRS2Q9HD23 443 aa6.36□□□□□ -1.39
RTTN-220ENST00000640654 CACNA2D2Q9NY47 1150 aa6.36□□□□□ -1.39
RTTN-220ENST00000640654 PCDHA4Q9UN74 947 aa6.36□□□□□ -1.39
RTTN-220ENST00000640654 CDC42BPAQ5VT25 1732 aa6.36□□□□□ -1.39
RTTN-220ENST00000640654 ABCC10Q5T3U5 1492 aa6.35□□□□□ -1.39
RTTN-220ENST00000640654 SLITRK5O94991 958 aa6.35□□□□□ -1.39
RTTN-220ENST00000640654 SRFP11831 508 aa6.35□□□□□ -1.39
RTTN-220ENST00000640654 CYP7A1P22680 504 aa6.35□□□□□ -1.39
RTTN-220ENST00000640654 SERPINB4P48594 390 aa6.35□□□□□ -1.39
RTTN-220ENST00000640654 RING1Q06587 406 aa6.35□□□□□ -1.39
RTTN-220ENST00000640654 ERICH6BQ5W0A0 696 aa6.35□□□□□ -1.39
RTTN-220ENST00000640654 UBE2FQ969M7 185 aa6.35□□□□□ -1.39
RTTN-220ENST00000640654 ALKBH8Q96BT7 664 aaKnown RBP6.35□□□□□ -1.39
RTTN-220ENST00000640654 COX4I2Q96KJ9 171 aa6.35□□□□□ -1.39
RTTN-220ENST00000640654 CEP44Q9C0F1 390 aa6.35□□□□□ -1.39
RTTN-220ENST00000640654 IRF2BPLQ9H1B7 796 aa6.35□□□□□ -1.39
RTTN-220ENST00000640654 ZCCHC4Q9H5U6 513 aa6.35□□□□□ -1.39
RTTN-220ENST00000640654 KCNK12Q9HB15 430 aa6.35□□□□□ -1.39
RTTN-220ENST00000640654 PARD6AQ9NPB6 346 aa6.35□□□□□ -1.39
RTTN-220ENST00000640654 TMEM59LQ9UK28 342 aa6.35□□□□□ -1.39
RTTN-220ENST00000640654 CAPN6Q9Y6Q1 641 aa6.35□□□□□ -1.39
RTTN-220ENST00000640654 ATP10BO94823 1461 aa6.34□□□□□ -1.39
RTTN-220ENST00000640654 DHX29Q7Z478 1369 aaKnown RBP6.34□□□□□ -1.39
RTTN-220ENST00000640654 PLEKHD1A6NEE1 506 aa6.34□□□□□ -1.39
RTTN-220ENST00000640654 SCARA3Q6AZY7 606 aa6.34□□□□□ -1.39
RTTN-220ENST00000640654 LLGL2Q6P1M3 1020 aa6.34□□□□□ -1.39
RTTN-220ENST00000640654 MFSD2AQ8NA29 543 aa6.34□□□□□ -1.39
RTTN-220ENST00000640654 NECAB3Q96P71 396 aaPredicted RBP6.34□□□□□ -1.39
RTTN-220ENST00000640654 ZSWIM5Q9P217 1185 aa6.34□□□□□ -1.39
RTTN-220ENST00000640654 ST14Q9Y5Y6 855 aa6.34□□□□□ -1.39
RTTN-220ENST00000640654 ANKRD50Q9ULJ7 1429 aa6.33□□□□□ -1.4
RTTN-220ENST00000640654 USP47Q96K76 1375 aa6.33□□□□□ -1.4
RTTN-220ENST00000640654 ZBED9Q6R2W3 1325 aa6.33□□□□□ -1.4
RTTN-220ENST00000640654 KDM5CP41229 1560 aa6.33□□□□□ -1.4
RTTN-220ENST00000640654 PRAMEF27A3QJZ7 478 aa6.33□□□□□ -1.4
RTTN-220ENST00000640654 CBX7O95931 251 aa6.33□□□□□ -1.4
RTTN-220ENST00000640654 KIR3DL1P43629 444 aa6.33□□□□□ -1.4
RTTN-220ENST00000640654 HK2P52789 917 aa6.33□□□□□ -1.4
RTTN-220ENST00000640654 ZNF326Q5BKZ1 582 aaKnown RBP6.33□□□□□ -1.4
RTTN-220ENST00000640654 MPRIPQ6WCQ1 1025 aa6.33□□□□□ -1.4
RTTN-220ENST00000640654 TMPRSS7Q7RTY8 843 aa6.33□□□□□ -1.4
RTTN-220ENST00000640654 JAG2Q9Y219 1238 aa6.33□□□□□ -1.4
RTTN-220ENST00000640654 SHANK2Q9UPX8 1470 aa6.33□□□□□ -1.4
RTTN-220ENST00000640654 C9orf84Q5VXU9 1444 aa6.33□□□□□ -1.4
RTTN-220ENST00000640654 UHRF1BP1Q6BDS2 1440 aa6.33□□□□□ -1.4
RTTN-220ENST00000640654 NUP155O75694 1391 aa6.32□□□□□ -1.4
RTTN-220ENST00000640654 KDM5DQ9BY66 1539 aa6.32□□□□□ -1.4
RTTN-220ENST00000640654 NXPE4Q6UWF7 544 aa6.32□□□□□ -1.4
RTTN-220ENST00000640654 PI16Q6UXB8 463 aa6.32□□□□□ -1.4
RTTN-220ENST00000640654 TPTE2Q6XPS3 522 aa6.32□□□□□ -1.4
RTTN-220ENST00000640654 DBX2Q6ZNG2 339 aa6.32□□□□□ -1.4
RTTN-220ENST00000640654 GRIN3AQ8TCU5 1115 aa6.32□□□□□ -1.4
RTTN-220ENST00000640654 C20orf173Q96LM9 149 aa6.32□□□□□ -1.4
RTTN-220ENST00000640654 POLR3GLQ9BT43 218 aa6.32□□□□□ -1.4
RTTN-220ENST00000640654 RALGAPBQ86X10 1494 aa6.32□□□□□ -1.4
RTTN-220ENST00000640654 ARID4BQ4LE39 1312 aaPredicted RBP6.31□□□□□ -1.4
RTTN-220ENST00000640654 DNAJC25-GNG10A0A024R161 153 aa6.31□□□□□ -1.4
RTTN-220ENST00000640654 CARNS1A5YM72 827 aa6.31□□□□□ -1.4
RTTN-220ENST00000640654 HPXP02790 462 aa6.31□□□□□ -1.4
RTTN-220ENST00000640654 SYN1P17600 705 aa6.31□□□□□ -1.4
RTTN-220ENST00000640654 BMP7P18075 431 aa6.31□□□□□ -1.4
RTTN-220ENST00000640654 GSTT1P30711 240 aa6.31□□□□□ -1.4
RTTN-220ENST00000640654 HNRNPMP52272 730 aaKnown RBP eCLIP6.31□□□□□ -1.4
RTTN-220ENST00000640654 RALGPS1Q5JS13 557 aa6.31□□□□□ -1.4
RTTN-220ENST00000640654 LETMD1Q6P1Q0 360 aa6.31□□□□□ -1.4
RTTN-220ENST00000640654 HDXQ7Z353 690 aa6.31□□□□□ -1.4
RTTN-220ENST00000640654 SLC6A17Q9H1V8 727 aa6.31□□□□□ -1.4
RTTN-220ENST00000640654 ARHGEF5Q12774 1597 aa6.31□□□□□ -1.4
RTTN-220ENST00000640654 ARHGEF12Q9NZN5 1544 aa6.3□□□□□ -1.4
RTTN-220ENST00000640654 IGHA2P01877 340 aa6.3□□□□□ -1.4
RTTN-220ENST00000640654 TSPY4P0CV99 314 aa6.3□□□□□ -1.4
RTTN-220ENST00000640654 TSPY10P0CW01 314 aa6.3□□□□□ -1.4
RTTN-220ENST00000640654 BMP6P22004 513 aa6.3□□□□□ -1.4
RTTN-220ENST00000640654 CAP2P40123 477 aa6.3□□□□□ -1.4
RTTN-220ENST00000640654 ETF1P62495 437 aaKnown RBP6.3□□□□□ -1.4
RTTN-220ENST00000640654 CNGB1Q14028 1251 aaPredicted RBP6.3□□□□□ -1.4
RTTN-220ENST00000640654 IRF2BP1Q8IU81 584 aa6.3□□□□□ -1.4
RTTN-220ENST00000640654 PPM1HQ9ULR3 514 aa6.3□□□□□ -1.4
RTTN-220ENST00000640654 PTPRGP23470 1445 aa6.3□□□□□ -1.4
RTTN-220ENST00000640654 SMG6Q86US8 1419 aaKnown RBP6.3□□□□□ -1.4
RTTN-220ENST00000640654 KIF15Q9NS87 1388 aa6.3□□□□□ -1.4
RTTN-220ENST00000640654 RFXAPO00287 272 aa6.29□□□□□ -1.4
RTTN-220ENST00000640654 ENC1O14682 589 aa6.29□□□□□ -1.4
RTTN-220ENST00000640654 FOXD2O60548 495 aaPredicted RBP6.29□□□□□ -1.4
RTTN-220ENST00000640654 SEMA7AO75326 666 aa6.29□□□□□ -1.4
RTTN-220ENST00000640654 ERVFC1P60507 584 aa6.29□□□□□ -1.4
RTTN-220ENST00000640654 SLBPQ14493 270 aaKnown RBP eCLIP6.29□□□□□ -1.4
RTTN-220ENST00000640654 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.29□□□□□ -1.4
RTTN-220ENST00000640654 TCERG1LQ5VWI1 586 aa6.29□□□□□ -1.4
RTTN-220ENST00000640654 TMEM132EQ6IEE7 984 aa6.29□□□□□ -1.4
RTTN-220ENST00000640654 SAMD9LQ8IVG5 1584 aa6.29□□□□□ -1.4
RTTN-220ENST00000640654 LILRA2Q8N149 483 aa6.29□□□□□ -1.4
RTTN-220ENST00000640654 CCDC82Q8N4S0 544 aa6.29□□□□□ -1.4
RTTN-220ENST00000640654 PIWIL2Q8TC59 973 aaKnown RBP6.29□□□□□ -1.4
RTTN-220ENST00000640654 CARD11Q9BXL7 1154 aa6.29□□□□□ -1.4
RTTN-220ENST00000640654 RBCK1Q9BYM8 510 aa6.29□□□□□ -1.4
RTTN-220ENST00000640654 FBRSQ9HAH7 460 aa6.29□□□□□ -1.4
RTTN-220ENST00000640654 CNOT6Q9ULM6 557 aaKnown RBP6.29□□□□□ -1.4
RTTN-220ENST00000640654 CYP8B1Q9UNU6 501 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms