RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 ZSWIM4Q9H7M6 989 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 RWDD2AQ9UIY3 292 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 ZNFX1Q9P2E3 1918 aaKnown RBP6.25□□□□□ -1.41
SCN3A-210ENST00000640652 OPA1O60313 960 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 SMC1AQ14683 1233 aaKnown RBP6.25□□□□□ -1.41
SCN3A-210ENST00000640652 CCDC84Q86UT8 332 aaPredicted RBP6.25□□□□□ -1.41
SCN3A-210ENST00000640652 MIGA1Q8NAN2 632 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 ENOX1Q8TC92 643 aaKnown RBP6.25□□□□□ -1.41
SCN3A-210ENST00000640652 NELFBQ8WX92 580 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 MORC3Q14149 939 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 NBPF11Q86T75 865 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 TAF4BQ92750 862 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 KAZALD1Q96I82 304 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 VPS18Q9P253 973 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 DTNBO60941 627 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 IL6STP40189 918 aaPredicted RBP6.25□□□□□ -1.41
SCN3A-210ENST00000640652 ZNF804AQ7Z570 1209 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 ZNF444Q8N0Y2 327 aaPredicted RBP6.25□□□□□ -1.41
SCN3A-210ENST00000640652 SYMPKQ92797 1274 aaKnown RBP6.25□□□□□ -1.41
SCN3A-210ENST00000640652 PCDHA5Q9Y5H7 936 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 LONP1P36776 959 aaKnown RBP6.25□□□□□ -1.41
SCN3A-210ENST00000640652 ASIC1P78348 528 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 CTDSPL2Q05D32 466 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 ARL6IP4Q66PJ3 421 aaKnown RBP6.25□□□□□ -1.41
SCN3A-210ENST00000640652 ARMCX5Q6P1M9 558 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 NLRP10Q86W26 655 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 RETREG2Q8NC44 543 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 GOLGA5Q8TBA6 731 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 MYL10Q9BUA6 226 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 TSKSQ9UJT2 592 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 DUOX1Q9NRD9 1551 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 RREB1Q92766 1687 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 KARSQ15046 597 aaKnown RBP6.24□□□□□ -1.41
SCN3A-210ENST00000640652 FAM71BQ8TC56 605 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 GTPBP6O43824 516 aaPredicted RBP6.24□□□□□ -1.41
SCN3A-210ENST00000640652 SLFN14P0C7P3 912 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 RDXP35241 583 aaKnown RBP6.24□□□□□ -1.41
SCN3A-210ENST00000640652 FAM76AQ8TAV0 307 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 EXOC4Q96A65 974 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 NIP7Q9Y221 180 aaKnown RBP eCLIP6.24□□□□□ -1.41
SCN3A-210ENST00000640652 LRP6O75581 1613 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 CTDNEP1O95476 244 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 LDHCP07864 332 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 ZSCAN20P17040 1043 aaPredicted RBP6.24□□□□□ -1.41
SCN3A-210ENST00000640652 HEATR3Q7Z4Q2 680 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 CARD6Q9BX69 1037 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 TMX1Q9H3N1 280 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 GREM2Q9H772 168 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 L2HGDHQ9H9P8 463 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 STX8Q9UNK0 236 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 HSF2BPO75031 334 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 NBPF5PQ86XG9 351 aaPredicted RBP6.24□□□□□ -1.41
SCN3A-210ENST00000640652 ZNF710Q8N1W2 664 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 TRIM58Q8NG06 486 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 AFAP1L1Q8TED9 768 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 RUBCNQ92622 972 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 JAKMIP2Q96AA8 810 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 RRP36Q96EU6 259 aaKnown RBP6.24□□□□□ -1.41
SCN3A-210ENST00000640652 CCDC43Q96MW1 224 aaKnown RBP6.24□□□□□ -1.41
SCN3A-210ENST00000640652 SAR1BQ9Y6B6 198 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 TAF1LQ8IZX4 1826 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 H7C1D1 291 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 IDEP14735 1019 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 ARID4AP29374 1257 aaPredicted RBP6.24□□□□□ -1.41
SCN3A-210ENST00000640652 NUCKS1Q9H1E3 243 aaKnown RBP6.24□□□□□ -1.41
SCN3A-210ENST00000640652 RASSF4Q9H2L5 321 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 KCNJ14Q9UNX9 436 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 BTBD18B2RXH4 712 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 AKR1B10O60218 316 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 ERMNQ8TAM6 284 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 DESI2Q9BSY9 194 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 SH3GLB2Q9NR46 395 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 VPS54Q9P1Q0 977 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 MICAL3Q7RTP6 2002 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 TNKSO95271 1327 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 NEDD4P46934 1319 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 SPATA31A3Q5VYP0 1347 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.24□□□□□ -1.41
SCN3A-210ENST00000640652 NAPAP54920 295 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 CSRNP2Q9H175 543 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 MAN1B1Q9UKM7 699 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 MRFAP1Q9Y605 127 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 COL5A2P05997 1499 aaPredicted RBP6.24□□□□□ -1.41
SCN3A-210ENST00000640652 STRCQ7RTU9 1775 aa6.24□□□□□ -1.41
SCN3A-210ENST00000640652 MST1RQ04912 1400 aa6.23□□□□□ -1.41
SCN3A-210ENST00000640652 VAV2P52735 878 aa6.23□□□□□ -1.41
SCN3A-210ENST00000640652 SRGAP1Q7Z6B7 1085 aa6.23□□□□□ -1.41
SCN3A-210ENST00000640652 GLT8D2Q9H1C3 349 aa6.23□□□□□ -1.41
SCN3A-210ENST00000640652 KCPQ6ZWJ8 1503 aa6.23□□□□□ -1.41
SCN3A-210ENST00000640652 TADA3O75528 432 aa6.23□□□□□ -1.41
SCN3A-210ENST00000640652 RHOXF2BP0C7M4 288 aa6.23□□□□□ -1.41
SCN3A-210ENST00000640652 SCG2P13521 617 aa6.23□□□□□ -1.41
SCN3A-210ENST00000640652 ATP1A3P13637 1013 aa6.23□□□□□ -1.41
SCN3A-210ENST00000640652 AK8Q96MA6 479 aa6.23□□□□□ -1.41
SCN3A-210ENST00000640652 RHOXF2Q9BQY4 288 aa6.23□□□□□ -1.41
SCN3A-210ENST00000640652 ZKSCAN3Q9BRR0 538 aa6.23□□□□□ -1.41
SCN3A-210ENST00000640652 IFIH1Q9BYX4 1025 aaKnown RBP6.23□□□□□ -1.41
SCN3A-210ENST00000640652 C6orf50Q9HD87 102 aa6.23□□□□□ -1.41
SCN3A-210ENST00000640652 CDC23Q9UJX2 597 aa6.23□□□□□ -1.41
SCN3A-210ENST00000640652 PHKA1P46020 1223 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms