RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-222ENST00000640634 BTBD19C9JJ37 291 aa12.93□□□□□ -0.34
SCARB2-222ENST00000640634 GTF2A2P52657 109 aa12.93□□□□□ -0.34
SCARB2-222ENST00000640634 BACE1P56817 501 aa12.93□□□□□ -0.34
SCARB2-222ENST00000640634 GPAT2Q6NUI2 795 aa12.93□□□□□ -0.34
SCARB2-222ENST00000640634 SPICE1Q8N0Z3 855 aa12.93□□□□□ -0.34
SCARB2-222ENST00000640634 RETREG2Q8NC44 543 aa12.93□□□□□ -0.34
SCARB2-222ENST00000640634 CCDC97Q96F63 343 aaPredicted RBP12.93□□□□□ -0.34
SCARB2-222ENST00000640634 FEZ1Q99689 392 aa12.93□□□□□ -0.34
SCARB2-222ENST00000640634 R3HDMLQ9H3Y0 253 aa12.93□□□□□ -0.34
SCARB2-222ENST00000640634 EMILIN3Q9NT22 766 aa12.93□□□□□ -0.34
SCARB2-222ENST00000640634 MANSC4A6NHS7 340 aaPredicted RBP12.92□□□□□ -0.34
SCARB2-222ENST00000640634 CPA1P15085 419 aa12.92□□□□□ -0.34
SCARB2-222ENST00000640634 MAP2K2P36507 400 aa12.92□□□□□ -0.34
SCARB2-222ENST00000640634 ANTXR2P58335 489 aa12.92□□□□□ -0.34
SCARB2-222ENST00000640634 IFNL1Q8IU54 200 aa12.92□□□□□ -0.34
SCARB2-222ENST00000640634 USP26Q9BXU7 913 aa12.92□□□□□ -0.34
SCARB2-222ENST00000640634 AS3MTQ9HBK9 375 aa12.92□□□□□ -0.34
SCARB2-222ENST00000640634 ZNF287Q9HBT7 754 aa12.92□□□□□ -0.34
SCARB2-222ENST00000640634 SENP2Q9HC62 589 aa12.92□□□□□ -0.34
SCARB2-222ENST00000640634 GPHNQ9NQX3 736 aaPredicted RBP12.92□□□□□ -0.34
SCARB2-222ENST00000640634 MTMR4Q9NYA4 1195 aa12.92□□□□□ -0.34
SCARB2-222ENST00000640634 ZSWIM5Q9P217 1185 aa12.92□□□□□ -0.34
SCARB2-222ENST00000640634 MYH4Q9Y623 1939 aa12.91□□□□□ -0.34
SCARB2-222ENST00000640634 USP17L10C9JJH3 530 aa12.91□□□□□ -0.34
SCARB2-222ENST00000640634 CXCL11O14625 94 aa12.91□□□□□ -0.34
SCARB2-222ENST00000640634 REC8O95072 547 aa12.91□□□□□ -0.34
SCARB2-222ENST00000640634 CETPP11597 493 aa12.91□□□□□ -0.34
SCARB2-222ENST00000640634 HSPA4P34932 840 aa12.91□□□□□ -0.34
SCARB2-222ENST00000640634 RCSD1Q6JBY9 416 aa12.91□□□□□ -0.34
SCARB2-222ENST00000640634 JMYQ8N9B5 988 aa12.91□□□□□ -0.34
SCARB2-222ENST00000640634 TCEANC2Q96MN5 208 aa12.91□□□□□ -0.34
SCARB2-222ENST00000640634 NUP88Q99567 741 aaPredicted RBP12.91□□□□□ -0.34
SCARB2-222ENST00000640634 RNF41Q9H4P4 317 aaPredicted RBP12.91□□□□□ -0.34
SCARB2-222ENST00000640634 KANSL2Q9H9L4 492 aa12.91□□□□□ -0.34
SCARB2-222ENST00000640634 CLIP2Q9UDT6 1046 aa12.91□□□□□ -0.34
SCARB2-222ENST00000640634 STX8Q9UNK0 236 aa12.91□□□□□ -0.34
SCARB2-222ENST00000640634 SNX14Q9Y5W7 946 aa12.91□□□□□ -0.34
SCARB2-222ENST00000640634 PEX10O60683 326 aa12.91□□□□□ -0.34
SCARB2-222ENST00000640634 CYP2C8P10632 490 aa12.91□□□□□ -0.34
SCARB2-222ENST00000640634 TM4SF4P48230 202 aa12.91□□□□□ -0.34
SCARB2-222ENST00000640634 MB21D2Q8IYB1 491 aaPredicted RBP12.91□□□□□ -0.34
SCARB2-222ENST00000640634 ESR2Q92731 530 aa12.91□□□□□ -0.34
SCARB2-222ENST00000640634 KIAA1683Q9H0B3 1180 aa12.91□□□□□ -0.34
SCARB2-222ENST00000640634 GINM1Q9NU53 330 aa12.91□□□□□ -0.34
SCARB2-222ENST00000640634 TMX2Q9Y320 296 aa12.91□□□□□ -0.34
SCARB2-222ENST00000640634 TRPA1O75762 1119 aa12.9□□□□□ -0.34
SCARB2-222ENST00000640634 VCAM1P19320 739 aa12.9□□□□□ -0.34
SCARB2-222ENST00000640634 SREBF2Q12772 1141 aa12.9□□□□□ -0.34
SCARB2-222ENST00000640634 SH3D19Q5HYK7 790 aa12.9□□□□□ -0.34
SCARB2-222ENST00000640634 SMYD5Q6GMV2 418 aa12.9□□□□□ -0.34
SCARB2-222ENST00000640634 LRRC2Q9BYS8 371 aa12.9□□□□□ -0.34
SCARB2-222ENST00000640634 WBP1LQ9NX94 342 aa12.9□□□□□ -0.34
SCARB2-222ENST00000640634 RNF186Q9NXI6 227 aa12.9□□□□□ -0.34
SCARB2-222ENST00000640634 PDHXO00330 501 aa12.89□□□□□ -0.35
SCARB2-222ENST00000640634 TBC1D8O95759 1140 aa12.89□□□□□ -0.35
SCARB2-222ENST00000640634 ENAHQ8N8S7 591 aaPredicted RBP12.89□□□□□ -0.35
SCARB2-222ENST00000640634 KRI1Q8N9T8 703 aaKnown RBP12.89□□□□□ -0.35
SCARB2-222ENST00000640634 KRT23Q9C075 422 aa12.89□□□□□ -0.35
SCARB2-222ENST00000640634 ARHGEF10LQ9HCE6 1279 aa12.89□□□□□ -0.35
SCARB2-222ENST00000640634 NYAP2Q9P242 653 aa12.89□□□□□ -0.35
SCARB2-222ENST00000640634 TNKSO95271 1327 aa12.89□□□□□ -0.35
SCARB2-222ENST00000640634 TTLL1O95922 423 aa12.88□□□□□ -0.35
SCARB2-222ENST00000640634 PCP11498 1178 aaKnown RBP12.88□□□□□ -0.35
SCARB2-222ENST00000640634 CRHR2Q13324 411 aa12.88□□□□□ -0.35
SCARB2-222ENST00000640634 IRF5Q13568 498 aa12.88□□□□□ -0.35
SCARB2-222ENST00000640634 USP17L2Q6R6M4 530 aa12.88□□□□□ -0.35
SCARB2-222ENST00000640634 POTEEQ6S8J3 1075 aa12.88□□□□□ -0.35
SCARB2-222ENST00000640634 RALYLQ86SE5 291 aaKnown RBP12.88□□□□□ -0.35
SCARB2-222ENST00000640634 NCOA7Q8NI08 942 aa12.88□□□□□ -0.35
SCARB2-222ENST00000640634 KCNB2Q92953 911 aa12.88□□□□□ -0.35
SCARB2-222ENST00000640634 ZSCAN10Q96SZ4 725 aaPredicted RBP12.88□□□□□ -0.35
SCARB2-222ENST00000640634 TMEM47Q9BQJ4 181 aa12.88□□□□□ -0.35
SCARB2-222ENST00000640634 VCPKMTQ9H867 229 aa12.88□□□□□ -0.35
SCARB2-222ENST00000640634 CNNM2Q9H8M5 875 aa12.88□□□□□ -0.35
SCARB2-222ENST00000640634 AGTPBP1Q9UPW5 1226 aa12.88□□□□□ -0.35
SCARB2-222ENST00000640634 HTTP42858 3142 aa12.88□□□□□ -0.35
SCARB2-222ENST00000640634 FOXN1O15353 648 aa12.88□□□□□ -0.35
SCARB2-222ENST00000640634 NDUFB10O96000 172 aa12.88□□□□□ -0.35
SCARB2-222ENST00000640634 HSPA1AP0DMV8 641 aaKnown RBP12.88□□□□□ -0.35
SCARB2-222ENST00000640634 HSPA1BP0DMV9 641 aaKnown RBP12.88□□□□□ -0.35
SCARB2-222ENST00000640634 NOVP48745 357 aa12.88□□□□□ -0.35
SCARB2-222ENST00000640634 TRDNQ13061 729 aa12.88□□□□□ -0.35
SCARB2-222ENST00000640634 ANKRD23Q86SG2 305 aa12.88□□□□□ -0.35
SCARB2-222ENST00000640634 JAKMIP1Q96N16 626 aaKnown RBP12.88□□□□□ -0.35
SCARB2-222ENST00000640634 TBC1D2Q9BYX2 928 aa12.88□□□□□ -0.35
SCARB2-222ENST00000640634 RPAP3Q9H6T3 665 aaPredicted RBP12.88□□□□□ -0.35
SCARB2-222ENST00000640634 FBXO28Q9NVF7 368 aa12.88□□□□□ -0.35
SCARB2-222ENST00000640634 TMOD4Q9NZQ9 345 aa12.88□□□□□ -0.35
SCARB2-222ENST00000640634 C19orf81C9J6K1 198 aa12.87□□□□□ -0.35
SCARB2-222ENST00000640634 F5H6K3 240 aa12.87□□□□□ -0.35
SCARB2-222ENST00000640634 PRC1O43663 620 aa12.87□□□□□ -0.35
SCARB2-222ENST00000640634 KLRC3Q07444 240 aa12.87□□□□□ -0.35
SCARB2-222ENST00000640634 PDE4DQ08499 809 aa12.87□□□□□ -0.35
SCARB2-222ENST00000640634 SEC23AQ15436 765 aa12.87□□□□□ -0.35
SCARB2-222ENST00000640634 TAF1CQ15572 869 aaPredicted RBP12.87□□□□□ -0.35
SCARB2-222ENST00000640634 FAM83BQ5T0W9 1011 aa12.87□□□□□ -0.35
SCARB2-222ENST00000640634 RNF20Q5VTR2 975 aa12.87□□□□□ -0.35
SCARB2-222ENST00000640634 FASTKD5Q7L8L6 764 aaKnown RBP12.87□□□□□ -0.35
SCARB2-222ENST00000640634 PROCA1Q8NCQ7 364 aaPredicted RBP12.87□□□□□ -0.35
SCARB2-222ENST00000640634 C12orf42Q96LP6 360 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms