RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	KIF3C	O14782	793 aa		20.73	■□□□□ 0.91
SPIN3-238	ENST00000640421	PPP1R12B	O60237	982 aa	Predicted RBP	20.73	■□□□□ 0.91
SPIN3-238	ENST00000640421	NF2	P35240	595 aa		20.73	■□□□□ 0.91
SPIN3-238	ENST00000640421	VGLL4	Q14135	290 aa		20.73	■□□□□ 0.91
SPIN3-238	ENST00000640421	INTS4	Q96HW7	963 aa	Known RBP	20.73	■□□□□ 0.91
SPIN3-238	ENST00000640421	ZNF408	Q9H9D4	720 aa		20.73	■□□□□ 0.91
SPIN3-238	ENST00000640421	JAK2	O60674	1132 aa		20.72	■□□□□ 0.91
SPIN3-238	ENST00000640421	ITGBL1	O95965	494 aa	Predicted RBP	20.72	■□□□□ 0.91
SPIN3-238	ENST00000640421	HSP90AA1	P07900	732 aa	Known RBP	20.72	■□□□□ 0.91
SPIN3-238	ENST00000640421	RTN1	Q16799	776 aa		20.72	■□□□□ 0.91
SPIN3-238	ENST00000640421	NOL9	Q5SY16	702 aa	Known RBP	20.72	■□□□□ 0.91
SPIN3-238	ENST00000640421	CHADL	Q6NUI6	762 aa		20.72	■□□□□ 0.91
SPIN3-238	ENST00000640421	CMTR1	Q8N1G2	835 aa	Known RBP	20.72	■□□□□ 0.91
SPIN3-238	ENST00000640421	SNCAIP	Q9Y6H5	919 aa		20.72	■□□□□ 0.91
SPIN3-238	ENST00000640421	USP17L5	A8MUK1	530 aa		20.71	■□□□□ 0.91
SPIN3-238	ENST00000640421	PTPRA	P18433	802 aa		20.71	■□□□□ 0.91
SPIN3-238	ENST00000640421	NTRK3	Q16288	839 aa		20.71	■□□□□ 0.91
SPIN3-238	ENST00000640421	PPP4R3B	Q5MIZ7	849 aa		20.71	■□□□□ 0.91
SPIN3-238	ENST00000640421	STAG2	Q8N3U4	1231 aa		20.71	■□□□□ 0.91
SPIN3-238	ENST00000640421	NSUN7	Q8NE18	718 aa	Known RBP	20.71	■□□□□ 0.91
SPIN3-238	ENST00000640421	PLEKHA8P1	O95397	391 aa		20.71	■□□□□ 0.91
SPIN3-238	ENST00000640421	CALM1	P0DP23	149 aa		20.71	■□□□□ 0.91
SPIN3-238	ENST00000640421	CALM2	P0DP24	149 aa		20.71	■□□□□ 0.91
SPIN3-238	ENST00000640421	CALM3	P0DP25	149 aa		20.71	■□□□□ 0.91
SPIN3-238	ENST00000640421	PDHB	P11177	359 aa		20.71	■□□□□ 0.91
SPIN3-238	ENST00000640421	MAP3K9	P80192	1104 aa		20.71	■□□□□ 0.91
SPIN3-238	ENST00000640421	GRM4	Q14833	912 aa		20.71	■□□□□ 0.91
SPIN3-238	ENST00000640421	MAP3K11	Q16584	847 aa		20.71	■□□□□ 0.91
SPIN3-238	ENST00000640421	KIAA1755	Q5JYT7	1200 aa		20.71	■□□□□ 0.91
SPIN3-238	ENST00000640421	CLMN	Q96JQ2	1002 aa		20.71	■□□□□ 0.91
SPIN3-238	ENST00000640421	GINM1	Q9NU53	330 aa		20.71	■□□□□ 0.91
SPIN3-238	ENST00000640421	MAD2L2	Q9UI95	211 aa		20.71	■□□□□ 0.91
SPIN3-238	ENST00000640421	SNHG28	P0DPA3	235 aa		20.7	■□□□□ 0.9
SPIN3-238	ENST00000640421	IREB2	P48200	963 aa	Known RBP	20.7	■□□□□ 0.9
SPIN3-238	ENST00000640421	TTLL12	Q14166	644 aa	Predicted RBP	20.7	■□□□□ 0.9
SPIN3-238	ENST00000640421	USP17L2	Q6R6M4	530 aa		20.7	■□□□□ 0.9
SPIN3-238	ENST00000640421	TMX2	Q9Y320	296 aa		20.7	■□□□□ 0.9
SPIN3-238	ENST00000640421	GOLGA8H	P0CJ92	632 aa		20.69	■□□□□ 0.9
SPIN3-238	ENST00000640421	MAP3K14	Q99558	947 aa		20.69	■□□□□ 0.9
SPIN3-238	ENST00000640421	ARHGEF10L	Q9HCE6	1279 aa		20.69	■□□□□ 0.9
SPIN3-238	ENST00000640421	PICK1	Q9NRD5	415 aa		20.69	■□□□□ 0.9
SPIN3-238	ENST00000640421	BAZ2B	Q9UIF8	2168 aa	Known RBP	20.69	■□□□□ 0.9
SPIN3-238	ENST00000640421		F5H6K3	240 aa		20.69	■□□□□ 0.9
SPIN3-238	ENST00000640421	KLRC3	Q07444	240 aa		20.69	■□□□□ 0.9
SPIN3-238	ENST00000640421	FUT2	Q10981	343 aa		20.69	■□□□□ 0.9
SPIN3-238	ENST00000640421	SLC35G1	Q2M3R5	365 aa		20.69	■□□□□ 0.9
SPIN3-238	ENST00000640421	NBPF11	Q86T75	865 aa		20.69	■□□□□ 0.9
SPIN3-238	ENST00000640421	CCDC82	Q8N4S0	544 aa		20.69	■□□□□ 0.9
SPIN3-238	ENST00000640421	CTCFL	Q8NI51	663 aa	Predicted RBP	20.69	■□□□□ 0.9
SPIN3-238	ENST00000640421	SMARCC2	Q8TAQ2	1214 aa		20.69	■□□□□ 0.9
SPIN3-238	ENST00000640421	CNKSR2	Q8WXI2	1034 aa		20.69	■□□□□ 0.9
SPIN3-238	ENST00000640421	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	20.69	■□□□□ 0.9
SPIN3-238	ENST00000640421	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	20.69	■□□□□ 0.9
SPIN3-238	ENST00000640421	PTPDC1	A2A3K4	754 aa		20.68	■□□□□ 0.9
SPIN3-238	ENST00000640421	PALM3	A6NDB9	673 aa	Predicted RBP	20.68	■□□□□ 0.9
SPIN3-238	ENST00000640421	UBE2Q2L	H0YL09	131 aa		20.68	■□□□□ 0.9
SPIN3-238	ENST00000640421	NDUFB10	O96000	172 aa		20.68	■□□□□ 0.9
SPIN3-238	ENST00000640421	DGKZ	Q13574	1117 aa		20.68	■□□□□ 0.9
SPIN3-238	ENST00000640421	ZYX	Q15942	572 aa	Known RBP	20.68	■□□□□ 0.9
SPIN3-238	ENST00000640421	TMTC3	Q6ZXV5	915 aa		20.68	■□□□□ 0.9
SPIN3-238	ENST00000640421	GMCL1P1	Q8NEA9	526 aa		20.68	■□□□□ 0.9
SPIN3-238	ENST00000640421	PHKB	Q93100	1093 aa		20.68	■□□□□ 0.9
SPIN3-238	ENST00000640421	CPLX1	O14810	134 aa		20.67	■□□□□ 0.9
SPIN3-238	ENST00000640421	RAD21	O60216	631 aa		20.67	■□□□□ 0.9
SPIN3-238	ENST00000640421	DHX16	O60231	1041 aa	Known RBP	20.67	■□□□□ 0.9
SPIN3-238	ENST00000640421	CELF2	O95319	508 aa	Known RBP	20.67	■□□□□ 0.9
SPIN3-238	ENST00000640421	GJB2	P29033	226 aa		20.67	■□□□□ 0.9
SPIN3-238	ENST00000640421	DDIT3	P35638	169 aa		20.67	■□□□□ 0.9
SPIN3-238	ENST00000640421	CST9	Q5W186	159 aa		20.67	■□□□□ 0.9
SPIN3-238	ENST00000640421	SPICE1	Q8N0Z3	855 aa		20.67	■□□□□ 0.9
SPIN3-238	ENST00000640421	SRBD1	Q8N5C6	995 aa	Known RBP	20.67	■□□□□ 0.9
SPIN3-238	ENST00000640421	DDX11	Q96FC9	970 aa		20.67	■□□□□ 0.9
SPIN3-238	ENST00000640421	NUP88	Q99567	741 aa	Predicted RBP	20.67	■□□□□ 0.9
SPIN3-238	ENST00000640421	LLPH	Q9BRT6	129 aa	Known RBP	20.67	■□□□□ 0.9
SPIN3-238	ENST00000640421	CPVL	Q9H3G5	476 aa		20.67	■□□□□ 0.9
SPIN3-238	ENST00000640421	ZHX2	Q9Y6X8	837 aa		20.67	■□□□□ 0.9
SPIN3-238	ENST00000640421	FRMPD2	Q68DX3	1309 aa	Predicted RBP	20.67	■□□□□ 0.9
SPIN3-238	ENST00000640421	FDPS	P14324	419 aa	Known RBP	20.67	■□□□□ 0.9
SPIN3-238	ENST00000640421	LDLRAD1	Q5T700	205 aa		20.67	■□□□□ 0.9
SPIN3-238	ENST00000640421	SLFN13	Q68D06	897 aa		20.67	■□□□□ 0.9
SPIN3-238	ENST00000640421	ANKRD13A	Q8IZ07	590 aa		20.67	■□□□□ 0.9
SPIN3-238	ENST00000640421	ELP3	Q9H9T3	547 aa		20.67	■□□□□ 0.9
SPIN3-238	ENST00000640421	RBM28	Q9NW13	759 aa	Known RBP	20.67	■□□□□ 0.9
SPIN3-238	ENST00000640421	SYNPO2	Q9UMS6	1093 aa		20.67	■□□□□ 0.9
SPIN3-238	ENST00000640421	SMC3	Q9UQE7	1217 aa		20.67	■□□□□ 0.9
SPIN3-238	ENST00000640421	CSAD	Q9Y600	493 aa		20.67	■□□□□ 0.9
SPIN3-238	ENST00000640421	TRPM7	Q96QT4	1865 aa		20.66	■□□□□ 0.9
SPIN3-238	ENST00000640421	PARP1	P09874	1014 aa	Known RBP	20.66	■□□□□ 0.9
SPIN3-238	ENST00000640421	IFNAR1	P17181	557 aa		20.66	■□□□□ 0.9
SPIN3-238	ENST00000640421	ZNF543	Q08ER8	600 aa		20.66	■□□□□ 0.9
SPIN3-238	ENST00000640421	SPP2	Q13103	211 aa		20.66	■□□□□ 0.9
SPIN3-238	ENST00000640421	PPP2R5B	Q15173	497 aa		20.66	■□□□□ 0.9
SPIN3-238	ENST00000640421	KCTD1	Q719H9	257 aa		20.66	■□□□□ 0.9
SPIN3-238	ENST00000640421	ARMC9	Q7Z3E5	817 aa		20.66	■□□□□ 0.9
SPIN3-238	ENST00000640421	WDR18	Q9BV38	432 aa		20.66	■□□□□ 0.9
SPIN3-238	ENST00000640421	VCPKMT	Q9H867	229 aa		20.66	■□□□□ 0.9
SPIN3-238	ENST00000640421	CCDC196	A0A1B0GTZ2	297 aa		20.65	■□□□□ 0.9
SPIN3-238	ENST00000640421	TRIM75P	A6NK02	468 aa		20.65	■□□□□ 0.9
SPIN3-238	ENST00000640421	KIF5B	P33176	963 aa		20.65	■□□□□ 0.9
SPIN3-238	ENST00000640421	MTMR2	Q13614	643 aa		20.65	■□□□□ 0.9

Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms