RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 CCDC144CPQ8IYA2 1237 aa8.73□□□□□ -1.01
RTTN-217ENST00000640393 RNF141Q8WVD5 230 aa8.73□□□□□ -1.01
RTTN-217ENST00000640393 HSPA12BQ96MM6 686 aa8.73□□□□□ -1.01
RTTN-217ENST00000640393 ST7Q9NRC1 585 aa8.73□□□□□ -1.01
RTTN-217ENST00000640393 ZSWIM5Q9P217 1185 aa8.73□□□□□ -1.01
RTTN-217ENST00000640393 FBXL21Q9UKT6 434 aa8.73□□□□□ -1.01
RTTN-217ENST00000640393 SCO2A0A1W2PP80 73 aa8.72□□□□□ -1.01
RTTN-217ENST00000640393 WASH4PA8MWX3 477 aa8.72□□□□□ -1.01
RTTN-217ENST00000640393 H3BS24 57 aa8.72□□□□□ -1.01
RTTN-217ENST00000640393 CCNFP41002 786 aa8.72□□□□□ -1.01
RTTN-217ENST00000640393 INTS5Q6P9B9 1019 aaKnown RBP8.72□□□□□ -1.01
RTTN-217ENST00000640393 ACTR10Q9NZ32 417 aa8.72□□□□□ -1.01
RTTN-217ENST00000640393 SUCOQ9UBS9 1254 aaKnown RBP8.72□□□□□ -1.01
RTTN-217ENST00000640393 PRKAG3Q9UGI9 489 aa8.72□□□□□ -1.01
RTTN-217ENST00000640393 KCNH3Q9ULD8 1083 aa8.72□□□□□ -1.01
RTTN-217ENST00000640393 CAPN6Q9Y6Q1 641 aa8.72□□□□□ -1.01
RTTN-217ENST00000640393 CD96P40200 585 aa8.71□□□□□ -1.02
RTTN-217ENST00000640393 KIR3DL1P43629 444 aa8.71□□□□□ -1.02
RTTN-217ENST00000640393 IFI16Q16666 785 aaKnown RBP8.71□□□□□ -1.02
RTTN-217ENST00000640393 TAB3Q8N5C8 712 aaPredicted RBP8.71□□□□□ -1.02
RTTN-217ENST00000640393 SREK1Q8WXA9 508 aaKnown RBP8.71□□□□□ -1.02
RTTN-217ENST00000640393 UBE2FQ969M7 185 aa8.71□□□□□ -1.02
RTTN-217ENST00000640393 VWCEQ96DN2 955 aa8.71□□□□□ -1.02
RTTN-217ENST00000640393 PCMTD2Q9NV79 361 aa8.71□□□□□ -1.02
RTTN-217ENST00000640393 COL17A1Q9UMD9 1497 aaPredicted RBP8.7□□□□□ -1.02
RTTN-217ENST00000640393 CASP7P55210 303 aa8.7□□□□□ -1.02
RTTN-217ENST00000640393 SNW1Q13573 536 aaKnown RBP8.7□□□□□ -1.02
RTTN-217ENST00000640393 SF3A1Q15459 793 aaKnown RBP8.7□□□□□ -1.02
RTTN-217ENST00000640393 AOC3Q16853 763 aa8.7□□□□□ -1.02
RTTN-217ENST00000640393 DCAF15Q66K64 600 aa8.7□□□□□ -1.02
RTTN-217ENST00000640393 PPFIBP1Q86W92 1011 aa8.7□□□□□ -1.02
RTTN-217ENST00000640393 SPACA3Q8IXA5 215 aa8.7□□□□□ -1.02
RTTN-217ENST00000640393 DTWD2Q8NBA8 298 aa8.7□□□□□ -1.02
RTTN-217ENST00000640393 PMFBP1Q8TBY8 1022 aa8.7□□□□□ -1.02
RTTN-217ENST00000640393 FBXL18Q96ME1 805 aa8.7□□□□□ -1.02
RTTN-217ENST00000640393 USP35Q9P2H5 1018 aa8.7□□□□□ -1.02
RTTN-217ENST00000640393 SLC12A7Q9Y666 1083 aa8.7□□□□□ -1.02
RTTN-217ENST00000640393 TMEM265A0A087WTH1 108 aa8.69□□□□□ -1.02
RTTN-217ENST00000640393 MEIS1O00470 390 aa8.69□□□□□ -1.02
RTTN-217ENST00000640393 DDAH1O94760 285 aa8.69□□□□□ -1.02
RTTN-217ENST00000640393 ZNF865P0CJ78 1059 aaPredicted RBP8.69□□□□□ -1.02
RTTN-217ENST00000640393 PMS1P54277 932 aaKnown RBP8.69□□□□□ -1.02
RTTN-217ENST00000640393 RNF4P78317 190 aa8.69□□□□□ -1.02
RTTN-217ENST00000640393 TNNI3KQ59H18 835 aa8.69□□□□□ -1.02
RTTN-217ENST00000640393 AXDND1Q5T1B0 1012 aaPredicted RBP8.69□□□□□ -1.02
RTTN-217ENST00000640393 KIAA1211LQ6NV74 962 aa8.69□□□□□ -1.02
RTTN-217ENST00000640393 VHLLQ6RSH7 139 aa8.69□□□□□ -1.02
RTTN-217ENST00000640393 DNAJC2Q99543 621 aaKnown RBP8.69□□□□□ -1.02
RTTN-217ENST00000640393 ASPNQ9BXN1 380 aa8.69□□□□□ -1.02
RTTN-217ENST00000640393 MKNK2Q9HBH9 465 aa8.69□□□□□ -1.02
RTTN-217ENST00000640393 ZNF214Q9UL59 606 aaPredicted RBP8.69□□□□□ -1.02
RTTN-217ENST00000640393 SLC7A5Q01650 507 aa8.68□□□□□ -1.02
RTTN-217ENST00000640393 MSMPQ1L6U9 139 aa8.68□□□□□ -1.02
RTTN-217ENST00000640393 CLEC16AQ2KHT3 1053 aa8.68□□□□□ -1.02
RTTN-217ENST00000640393 NBPF9Q3BBW0 867 aa8.68□□□□□ -1.02
RTTN-217ENST00000640393 C19orf47Q8N9M1 422 aaKnown RBP8.68□□□□□ -1.02
RTTN-217ENST00000640393 COX4I2Q96KJ9 171 aa8.68□□□□□ -1.02
RTTN-217ENST00000640393 HRASLS5Q96KN8 279 aa8.68□□□□□ -1.02
RTTN-217ENST00000640393 DRC1Q96MC2 740 aa8.68□□□□□ -1.02
RTTN-217ENST00000640393 ASCC2Q9H1I8 757 aaPredicted RBP8.68□□□□□ -1.02
RTTN-217ENST00000640393 BSDC1Q9NW68 430 aaPredicted RBP8.68□□□□□ -1.02
RTTN-217ENST00000640393 MINPP1Q9UNW1 487 aa8.68□□□□□ -1.02
RTTN-217ENST00000640393 CD97P48960 835 aa8.67□□□□□ -1.02
RTTN-217ENST00000640393 AUHQ13825 339 aaKnown RBP8.67□□□□□ -1.02
RTTN-217ENST00000640393 C6orf15Q6UXA7 325 aaPredicted RBP8.67□□□□□ -1.02
RTTN-217ENST00000640393 TMC3Q7Z5M5 1100 aa8.67□□□□□ -1.02
RTTN-217ENST00000640393 CKAP2LQ8IYA6 745 aa8.67□□□□□ -1.02
RTTN-217ENST00000640393 MICAL1Q8TDZ2 1067 aa8.67□□□□□ -1.02
RTTN-217ENST00000640393 TRIM55Q9BYV6 548 aa8.67□□□□□ -1.02
RTTN-217ENST00000640393 PRDM14Q9GZV8 571 aa8.67□□□□□ -1.02
RTTN-217ENST00000640393 PHAXQ9H814 394 aaKnown RBP8.67□□□□□ -1.02
RTTN-217ENST00000640393 ST14Q9Y5Y6 855 aa8.67□□□□□ -1.02
RTTN-217ENST00000640393 SHISA3A0PJX4 238 aa8.66□□□□□ -1.02
RTTN-217ENST00000640393 B2RBV5 119 aa8.66□□□□□ -1.02
RTTN-217ENST00000640393 HYAL3O43820 417 aaPredicted RBP8.66□□□□□ -1.02
RTTN-217ENST00000640393 ZNF574Q6ZN55 896 aaPredicted RBP8.66□□□□□ -1.02
RTTN-217ENST00000640393 ADAT2Q7Z6V5 191 aaKnown RBP8.66□□□□□ -1.02
RTTN-217ENST00000640393 FGD4Q96M96 766 aa8.66□□□□□ -1.02
RTTN-217ENST00000640393 DUSP15Q9H1R2 295 aaPredicted RBP8.66□□□□□ -1.02
RTTN-217ENST00000640393 ATP13A1Q9HD20 1204 aa8.66□□□□□ -1.02
RTTN-217ENST00000640393 CCDC85CA6NKD9 419 aa8.65□□□□□ -1.02
RTTN-217ENST00000640393 TPP2P29144 1249 aaPredicted RBP8.65□□□□□ -1.02
RTTN-217ENST00000640393 FXNQ16595 210 aa8.65□□□□□ -1.02
RTTN-217ENST00000640393 BBS9Q3SYG4 887 aa8.65□□□□□ -1.02
RTTN-217ENST00000640393 NOL9Q5SY16 702 aaKnown RBP8.65□□□□□ -1.02
RTTN-217ENST00000640393 C22orf34Q6ZV56 151 aa8.65□□□□□ -1.02
RTTN-217ENST00000640393 C7orf61Q8IZ16 206 aa8.65□□□□□ -1.02
RTTN-217ENST00000640393 CELF2-AS1Q8N7Q2 184 aa8.65□□□□□ -1.02
RTTN-217ENST00000640393 PIWIL2Q8TC59 973 aaKnown RBP8.65□□□□□ -1.02
RTTN-217ENST00000640393 BRF1Q92994 677 aa8.65□□□□□ -1.02
RTTN-217ENST00000640393 GFOD1Q9NXC2 390 aa8.65□□□□□ -1.02
RTTN-217ENST00000640393 CCDC39Q9UFE4 941 aa8.65□□□□□ -1.02
RTTN-217ENST00000640393 ANGEL1Q9UNK9 670 aaKnown RBP8.65□□□□□ -1.02
RTTN-217ENST00000640393 SLC5A6Q9Y289 635 aa8.65□□□□□ -1.02
RTTN-217ENST00000640393 ZNF451Q9Y4E5 1061 aa8.65□□□□□ -1.02
RTTN-217ENST00000640393 PCDHB12Q9Y5F1 795 aa8.65□□□□□ -1.02
RTTN-217ENST00000640393 KLF4O43474 513 aa8.64□□□□□ -1.03
RTTN-217ENST00000640393 PRKCQQ04759 706 aa8.64□□□□□ -1.03
RTTN-217ENST00000640393 NMIQ13287 307 aaPredicted RBP8.64□□□□□ -1.03
RTTN-217ENST00000640393 HEATR6Q6AI08 1181 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms