RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 ZMYM6O95789 1325 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 POLR2AP24928 1970 aaKnown RBP6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 F5H6K3 240 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 ZBTB43O43298 467 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 PARP1P09874 1014 aaKnown RBP6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 OSBPP22059 807 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 SLC16A2P36021 539 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 KLRC3Q07444 240 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 PABPC4Q13310 644 aaKnown RBP eCLIP6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 PPIL2Q13356 520 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 RABEP1Q15276 862 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 FASTKD5Q7L8L6 764 aaKnown RBP6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 HSCBQ8IWL3 235 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 TMTC2Q8N394 836 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 UBA5Q9GZZ9 404 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 UTRNP46939 3433 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 PASKQ96RG2 1323 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 SPDYE5A6NIY4 337 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 ANP32AP39687 249 aaKnown RBP6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 VEGFBP49765 207 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 BACE1P56817 501 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 SREBF2Q12772 1141 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 NOGQ13253 232 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 LDLRAD1Q5T700 205 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 RASAL3Q86YV0 1011 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 MB21D2Q8IYB1 491 aaPredicted RBP6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 ENAHQ8N8S7 591 aaPredicted RBP6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 RPAP3Q9H6T3 665 aaPredicted RBP6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 ZNF112Q9UJU3 913 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 MANSC4A6NHS7 340 aaPredicted RBP6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 DTNBO60941 627 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 TRPA1O75762 1119 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 BMP3P12645 472 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 METAP2P50579 478 aaKnown RBP eCLIP6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 ANAPC15P60006 121 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 SNAP25P60880 206 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 ANKRD1Q15327 319 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 CCDC174Q6PII3 467 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 ZNF654Q8IZM8 581 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 NYAP2Q9P242 653 aa6.77□□□□□ -1.33
HNRNPU-220ENST00000639667 WDR33Q9C0J8 1336 aaKnown RBP6.76□□□□□ -1.33
HNRNPU-220ENST00000639667 C19orf81C9J6K1 198 aa6.76□□□□□ -1.33
HNRNPU-220ENST00000639667 CXCL11O14625 94 aa6.76□□□□□ -1.33
HNRNPU-220ENST00000639667 KIF5BP33176 963 aa6.76□□□□□ -1.33
HNRNPU-220ENST00000639667 CPVLQ9H3G5 476 aa6.76□□□□□ -1.33
HNRNPU-220ENST00000639667 VCPKMTQ9H867 229 aa6.76□□□□□ -1.33
HNRNPU-220ENST00000639667 SENP2Q9HC62 589 aa6.76□□□□□ -1.33
HNRNPU-220ENST00000639667 GINM1Q9NU53 330 aa6.76□□□□□ -1.33
HNRNPU-220ENST00000639667 TSKSQ9UJT2 592 aa6.76□□□□□ -1.33
HNRNPU-220ENST00000639667 NDUFB10O96000 172 aa6.76□□□□□ -1.33
HNRNPU-220ENST00000639667 RTN1Q16799 776 aa6.76□□□□□ -1.33
HNRNPU-220ENST00000639667 CMTR1Q8N1G2 835 aaKnown RBP6.76□□□□□ -1.33
HNRNPU-220ENST00000639667 NECAB1Q8N987 351 aa6.76□□□□□ -1.33
HNRNPU-220ENST00000639667 TBC1D32Q96NH3 1257 aa6.76□□□□□ -1.33
HNRNPU-220ENST00000639667 IL17RBQ9NRM6 502 aa6.76□□□□□ -1.33
HNRNPU-220ENST00000639667 A0A1W2PRG0 241 aa6.76□□□□□ -1.33
HNRNPU-220ENST00000639667 SH2B2O14492 632 aaPredicted RBP6.76□□□□□ -1.33
HNRNPU-220ENST00000639667 EPB41L2O43491 1005 aaKnown RBP6.76□□□□□ -1.33
HNRNPU-220ENST00000639667 ZBED4O75132 1171 aa6.76□□□□□ -1.33
HNRNPU-220ENST00000639667 AK2P54819 239 aa6.76□□□□□ -1.33
HNRNPU-220ENST00000639667 ANTXR2P58335 489 aa6.76□□□□□ -1.33
HNRNPU-220ENST00000639667 NOL9Q5SY16 702 aaKnown RBP6.76□□□□□ -1.33
HNRNPU-220ENST00000639667 RASGRP2Q7LDG7 609 aa6.76□□□□□ -1.33
HNRNPU-220ENST00000639667 DGKHQ86XP1 1220 aa6.76□□□□□ -1.33
HNRNPU-220ENST00000639667 CHURC1Q8WUH1 139 aa6.76□□□□□ -1.33
HNRNPU-220ENST00000639667 TTC14Q96N46 770 aa6.76□□□□□ -1.33
HNRNPU-220ENST00000639667 ZIC5Q96T25 663 aa6.76□□□□□ -1.33
HNRNPU-220ENST00000639667 BAZ2AQ9UIF9 1905 aaKnown RBP6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 hCG_1642624A0A1W2PR95 340 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 USP17L15C9J2P7 530 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 USP17L13C9JLJ4 530 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 USP17L11C9JVI0 530 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 USP17L18D6R9N7 530 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 USP17L22D6RA61 530 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 USP17L17D6RBQ6 530 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 USP17L19D6RCP7 530 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 USP17L20D6RJB6 530 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 PDHXO00330 501 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 GUCY1A2P33402 732 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 GJA5P36382 358 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 USP17L24Q0WX57 530 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 NKX2-3Q8TAU0 364 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 ZSWIM6Q9HCJ5 1215 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 HOMER2Q9NSB8 354 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 FBXO28Q9NVF7 368 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 TMX2Q9Y320 296 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 AFG3L2Q9Y4W6 797 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 SLC10A3P09131 477 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 CYP2C8P10632 490 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 BECN1Q14457 450 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 MAP3K11Q16584 847 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 TTBK2Q6IQ55 1244 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 CCDC83Q8IWF9 413 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 DDX11Q96FC9 970 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 NCOA5Q9HCD5 579 aaKnown RBP6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 SEC63Q9UGP8 760 aaKnown RBP6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 PNMA3Q9UL41 463 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 KLRF2D3W0D1 207 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 CALM1P0DP23 149 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 CALM2P0DP24 149 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms