RNA–Protein interactions for RNA: ENST00000638692.1

PTPRVP-203, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

TSL 1 (best)

Gene PTPRVP, Length 1,189 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-203ENST00000638692 USP17L18D6R9N7 530 aa20.63■□□□□ 0.89
PTPRVP-203ENST00000638692 USP17L22D6RA61 530 aa20.63■□□□□ 0.89
PTPRVP-203ENST00000638692 USP17L17D6RBQ6 530 aa20.63■□□□□ 0.89
PTPRVP-203ENST00000638692 USP17L19D6RCP7 530 aa20.63■□□□□ 0.89
PTPRVP-203ENST00000638692 USP17L20D6RJB6 530 aa20.63■□□□□ 0.89
PTPRVP-203ENST00000638692 ZNF213O14771 459 aa20.63■□□□□ 0.89
PTPRVP-203ENST00000638692 TSPY3P0CV98 308 aa20.63■□□□□ 0.89
PTPRVP-203ENST00000638692 TSPY8P0CW00 308 aa20.63■□□□□ 0.89
PTPRVP-203ENST00000638692 IRX3P78415 501 aaPredicted RBP20.63■□□□□ 0.89
PTPRVP-203ENST00000638692 USP17L24Q0WX57 530 aa20.63■□□□□ 0.89
PTPRVP-203ENST00000638692 AKNAD1Q5T1N1 836 aa20.63■□□□□ 0.89
PTPRVP-203ENST00000638692 SPICE1Q8N0Z3 855 aa20.63■□□□□ 0.89
PTPRVP-203ENST00000638692 ANKRD13CQ8N6S4 541 aa20.63■□□□□ 0.89
PTPRVP-203ENST00000638692 STAG1Q8WVM7 1258 aa20.63■□□□□ 0.89
PTPRVP-203ENST00000638692 CENPFP49454 3210 aa20.63■□□□□ 0.89
PTPRVP-203ENST00000638692 RANBP6O60518 1105 aaKnown RBP20.62■□□□□ 0.89
PTPRVP-203ENST00000638692 NMT2O60551 498 aa20.62■□□□□ 0.89
PTPRVP-203ENST00000638692 ECM2O94769 699 aaPredicted RBP20.62■□□□□ 0.89
PTPRVP-203ENST00000638692 HERVK_113P62684 666 aa20.62■□□□□ 0.89
PTPRVP-203ENST00000638692 MKL1Q969V6 931 aa20.62■□□□□ 0.89
PTPRVP-203ENST00000638692 ESYT1Q9BSJ8 1104 aa20.62■□□□□ 0.89
PTPRVP-203ENST00000638692 SH2D4AQ9H788 454 aa20.62■□□□□ 0.89
PTPRVP-203ENST00000638692 CLIP2Q9UDT6 1046 aa20.62■□□□□ 0.89
PTPRVP-203ENST00000638692 TRIM17Q9Y577 477 aa20.62■□□□□ 0.89
PTPRVP-203ENST00000638692 NEDD4P46934 1319 aa20.61■□□□□ 0.89
PTPRVP-203ENST00000638692 TSPY2A6NKD2 308 aa20.61■□□□□ 0.89
PTPRVP-203ENST00000638692 GCLCP48506 637 aaPredicted RBP20.61■□□□□ 0.89
PTPRVP-203ENST00000638692 RRP12Q5JTH9 1297 aaKnown RBP20.61■□□□□ 0.89
PTPRVP-203ENST00000638692 MFSD6Q6ZSS7 791 aa20.61■□□□□ 0.89
PTPRVP-203ENST00000638692 LPAR1Q92633 364 aa20.61■□□□□ 0.89
PTPRVP-203ENST00000638692 TXNRD2Q9NNW7 524 aa20.61■□□□□ 0.89
PTPRVP-203ENST00000638692 RBPJLQ9UBG7 517 aa20.61■□□□□ 0.89
PTPRVP-203ENST00000638692 COL11A1P12107 1806 aaPredicted RBP20.6■□□□□ 0.89
PTPRVP-203ENST00000638692 TTLL1O95922 423 aa20.6■□□□□ 0.89
PTPRVP-203ENST00000638692 NOVP48745 357 aa20.6■□□□□ 0.89
PTPRVP-203ENST00000638692 FAM110CQ1W6H9 321 aa20.6■□□□□ 0.89
PTPRVP-203ENST00000638692 TRIM47Q96LD4 638 aa20.6■□□□□ 0.89
PTPRVP-203ENST00000638692 EFCC1Q9HA90 598 aa20.6■□□□□ 0.89
PTPRVP-203ENST00000638692 TOMM22Q9NS69 142 aa20.6■□□□□ 0.89
PTPRVP-203ENST00000638692 CTNNA3Q9UI47 895 aa20.6■□□□□ 0.89
PTPRVP-203ENST00000638692 A0A0G2JMZ2 1700 aa20.6■□□□□ 0.89
PTPRVP-203ENST00000638692 F5H6K3 240 aa20.59■□□□□ 0.89
PTPRVP-203ENST00000638692 CNMDO75829 334 aa20.59■□□□□ 0.89
PTPRVP-203ENST00000638692 PCP11498 1178 aaKnown RBP20.59■□□□□ 0.89
PTPRVP-203ENST00000638692 PSMC4P43686 418 aa20.59■□□□□ 0.89
PTPRVP-203ENST00000638692 KLRC3Q07444 240 aa20.59■□□□□ 0.89
PTPRVP-203ENST00000638692 IMMTQ16891 758 aaKnown RBP20.59■□□□□ 0.89
PTPRVP-203ENST00000638692 MAP4K1Q92918 833 aa20.59■□□□□ 0.89
PTPRVP-203ENST00000638692 LSG1Q9H089 658 aaKnown RBP20.59■□□□□ 0.89
PTPRVP-203ENST00000638692 GOPCQ9HD26 462 aa20.59■□□□□ 0.89
PTPRVP-203ENST00000638692 MORF4L1Q9UBU8 362 aa20.59■□□□□ 0.89
PTPRVP-203ENST00000638692 TAF6LQ9Y6J9 622 aa20.59■□□□□ 0.89
PTPRVP-203ENST00000638692 SPDYE16A6NNV3 312 aaPredicted RBP20.58■□□□□ 0.89
PTPRVP-203ENST00000638692 WDR46O15213 610 aaKnown RBP20.58■□□□□ 0.89
PTPRVP-203ENST00000638692 NDUFB10O96000 172 aa20.58■□□□□ 0.89
PTPRVP-203ENST00000638692 PKN2Q16513 984 aaKnown RBP20.58■□□□□ 0.89
PTPRVP-203ENST00000638692 Q3C1V9 767 aa20.58■□□□□ 0.89
PTPRVP-203ENST00000638692 LRRC47Q8N1G4 583 aaKnown RBP20.58■□□□□ 0.89
PTPRVP-203ENST00000638692 NUP88Q99567 741 aaPredicted RBP20.58■□□□□ 0.89
PTPRVP-203ENST00000638692 TANGO6Q9C0B7 1094 aa20.58■□□□□ 0.89
PTPRVP-203ENST00000638692 PLXNB2O15031 1838 aa20.57■□□□□ 0.88
PTPRVP-203ENST00000638692 CYP21A2P08686 494 aa20.57■□□□□ 0.88
PTPRVP-203ENST00000638692 COG2Q14746 738 aa20.57■□□□□ 0.88
PTPRVP-203ENST00000638692 KIF22Q14807 665 aa20.57■□□□□ 0.88
PTPRVP-203ENST00000638692 FBXO46Q6PJ61 603 aaPredicted RBP20.57■□□□□ 0.88
PTPRVP-203ENST00000638692 LBX2Q6XYB7 198 aa20.57■□□□□ 0.88
PTPRVP-203ENST00000638692 ABHD8Q96I13 439 aa20.57■□□□□ 0.88
PTPRVP-203ENST00000638692 RNF41Q9H4P4 317 aaPredicted RBP20.57■□□□□ 0.88
PTPRVP-203ENST00000638692 TCP11L1Q9NUJ3 509 aa20.57■□□□□ 0.88
PTPRVP-203ENST00000638692 PTPN22Q9Y2R2 807 aa20.57■□□□□ 0.88
PTPRVP-203ENST00000638692 U3KPZ7 1027 aaPredicted RBP20.57■□□□□ 0.88
PTPRVP-203ENST00000638692 B4E1Z4 1266 aa20.56■□□□□ 0.88
PTPRVP-203ENST00000638692 RAD21O60216 631 aa20.56■□□□□ 0.88
PTPRVP-203ENST00000638692 CDC45O75419 566 aa20.56■□□□□ 0.88
PTPRVP-203ENST00000638692 FAM83BQ5T0W9 1011 aa20.56■□□□□ 0.88
PTPRVP-203ENST00000638692 RCSD1Q6JBY9 416 aa20.56■□□□□ 0.88
PTPRVP-203ENST00000638692 FBXO28Q9NVF7 368 aa20.56■□□□□ 0.88
PTPRVP-203ENST00000638692 BTBD7Q9P203 1132 aa20.56■□□□□ 0.88
PTPRVP-203ENST00000638692 SYNPO2Q9UMS6 1093 aa20.56■□□□□ 0.88
PTPRVP-203ENST00000638692 RBM8AQ9Y5S9 174 aaKnown RBP20.56■□□□□ 0.88
PTPRVP-203ENST00000638692 FMNL1O95466 1100 aaPredicted RBP20.55■□□□□ 0.88
PTPRVP-203ENST00000638692 GMCL1P1Q8NEA9 526 aa20.55■□□□□ 0.88
PTPRVP-203ENST00000638692 PAGR1Q9BTK6 254 aa20.55■□□□□ 0.88
PTPRVP-203ENST00000638692 STX8Q9UNK0 236 aa20.55■□□□□ 0.88
PTPRVP-203ENST00000638692 RABGAP1Q9Y3P9 1069 aa20.55■□□□□ 0.88
PTPRVP-203ENST00000638692 KDM4AO75164 1064 aa20.54■□□□□ 0.88
PTPRVP-203ENST00000638692 FLOT1O75955 427 aa20.54■□□□□ 0.88
PTPRVP-203ENST00000638692 DSG3P32926 999 aa20.54■□□□□ 0.88
PTPRVP-203ENST00000638692 FCGRTP55899 365 aa20.54■□□□□ 0.88
PTPRVP-203ENST00000638692 ERVK-9P63128 1117 aa20.54■□□□□ 0.88
PTPRVP-203ENST00000638692 ERVK-24P63145 666 aa20.54■□□□□ 0.88
PTPRVP-203ENST00000638692 ARHGEF6Q15052 776 aa20.54■□□□□ 0.88
PTPRVP-203ENST00000638692 GPRC5AQ8NFJ5 357 aa20.54■□□□□ 0.88
PTPRVP-203ENST00000638692 GTF3C2Q8WUA4 911 aaPredicted RBP20.54■□□□□ 0.88
PTPRVP-203ENST00000638692 ESR2Q92731 530 aa20.54■□□□□ 0.88
PTPRVP-203ENST00000638692 ZKSCAN3Q9BRR0 538 aa20.54■□□□□ 0.88
PTPRVP-203ENST00000638692 HOXC10Q9NYD6 342 aa20.54■□□□□ 0.88
PTPRVP-203ENST00000638692 ZSWIM5Q9P217 1185 aa20.54■□□□□ 0.88
PTPRVP-203ENST00000638692 GABRQQ9UN88 632 aa20.54■□□□□ 0.88
PTPRVP-203ENST00000638692 ADAMTS5Q9UNA0 930 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms