RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 VCPKMTQ9H867 229 aa25.85■■□□□ 1.73
SCN1B-206ENST00000638536 TXNRD2Q9NNW7 524 aa25.85■■□□□ 1.73
SCN1B-206ENST00000638536 IL17RBQ9NRM6 502 aa25.85■■□□□ 1.73
SCN1B-206ENST00000638536 MTMR4Q9NYA4 1195 aa25.85■■□□□ 1.73
SCN1B-206ENST00000638536 RAD50Q92878 1312 aa25.84■■□□□ 1.73
SCN1B-206ENST00000638536 PLIN4Q96Q06 1357 aa25.84■■□□□ 1.73
SCN1B-206ENST00000638536 USP17L15C9J2P7 530 aa25.84■■□□□ 1.73
SCN1B-206ENST00000638536 USP17L13C9JLJ4 530 aa25.84■■□□□ 1.73
SCN1B-206ENST00000638536 USP17L11C9JVI0 530 aa25.84■■□□□ 1.73
SCN1B-206ENST00000638536 USP17L18D6R9N7 530 aa25.84■■□□□ 1.73
SCN1B-206ENST00000638536 USP17L22D6RA61 530 aa25.84■■□□□ 1.73
SCN1B-206ENST00000638536 USP17L17D6RBQ6 530 aa25.84■■□□□ 1.73
SCN1B-206ENST00000638536 USP17L19D6RCP7 530 aa25.84■■□□□ 1.73
SCN1B-206ENST00000638536 USP17L20D6RJB6 530 aa25.84■■□□□ 1.73
SCN1B-206ENST00000638536 RANBP6O60518 1105 aaKnown RBP25.84■■□□□ 1.73
SCN1B-206ENST00000638536 USP17L24Q0WX57 530 aa25.84■■□□□ 1.73
SCN1B-206ENST00000638536 RUFY2Q8WXA3 655 aa25.84■■□□□ 1.73
SCN1B-206ENST00000638536 TRIM47Q96LD4 638 aa25.84■■□□□ 1.73
SCN1B-206ENST00000638536 EFCC1Q9HA90 598 aa25.84■■□□□ 1.73
SCN1B-206ENST00000638536 NYAP2Q9P242 653 aa25.84■■□□□ 1.73
SCN1B-206ENST00000638536 CLIP2Q9UDT6 1046 aa25.84■■□□□ 1.73
SCN1B-206ENST00000638536 RRP12Q5JTH9 1297 aaKnown RBP25.83■■□□□ 1.73
SCN1B-206ENST00000638536 TOMM22Q9NS69 142 aa25.83■■□□□ 1.73
SCN1B-206ENST00000638536 ZNF213O14771 459 aa25.82■■□□□ 1.72
SCN1B-206ENST00000638536 PSMC4P43686 418 aa25.82■■□□□ 1.72
SCN1B-206ENST00000638536 AKNAD1Q5T1N1 836 aa25.82■■□□□ 1.72
SCN1B-206ENST00000638536 ABHD8Q96I13 439 aa25.82■■□□□ 1.72
SCN1B-206ENST00000638536 RBPJLQ9UBG7 517 aa25.82■■□□□ 1.72
SCN1B-206ENST00000638536 NEDD4P46934 1319 aa25.82■■□□□ 1.72
SCN1B-206ENST00000638536 TSPY2A6NKD2 308 aa25.81■■□□□ 1.72
SCN1B-206ENST00000638536 STAG1Q8WVM7 1258 aa25.81■■□□□ 1.72
SCN1B-206ENST00000638536 FAM110CQ1W6H9 321 aa25.81■■□□□ 1.72
SCN1B-206ENST00000638536 Q3C1V9 767 aa25.81■■□□□ 1.72
SCN1B-206ENST00000638536 RAD21O60216 631 aa25.8■■□□□ 1.72
SCN1B-206ENST00000638536 GCLCP48506 637 aaPredicted RBP25.8■■□□□ 1.72
SCN1B-206ENST00000638536 MFSD6Q6ZSS7 791 aa25.8■■□□□ 1.72
SCN1B-206ENST00000638536 LRRC47Q8N1G4 583 aaKnown RBP25.8■■□□□ 1.72
SCN1B-206ENST00000638536 MKL1Q969V6 931 aa25.8■■□□□ 1.72
SCN1B-206ENST00000638536 NUP88Q99567 741 aaPredicted RBP25.8■■□□□ 1.72
SCN1B-206ENST00000638536 SH2D4AQ9H788 454 aa25.8■■□□□ 1.72
SCN1B-206ENST00000638536 SPDYE16A6NNV3 312 aaPredicted RBP25.79■■□□□ 1.72
SCN1B-206ENST00000638536 LPAR1Q92633 364 aa25.79■■□□□ 1.72
SCN1B-206ENST00000638536 ESYT1Q9BSJ8 1104 aa25.79■■□□□ 1.72
SCN1B-206ENST00000638536 TANGO6Q9C0B7 1094 aa25.79■■□□□ 1.72
SCN1B-206ENST00000638536 MORF4L1Q9UBU8 362 aa25.79■■□□□ 1.72
SCN1B-206ENST00000638536 PTPN22Q9Y2R2 807 aa25.79■■□□□ 1.72
SCN1B-206ENST00000638536 TAF6LQ9Y6J9 622 aa25.79■■□□□ 1.72
SCN1B-206ENST00000638536 F5H6K3 240 aa25.78■■□□□ 1.72
SCN1B-206ENST00000638536 CNMDO75829 334 aa25.78■■□□□ 1.72
SCN1B-206ENST00000638536 TTLL1O95922 423 aa25.78■■□□□ 1.72
SCN1B-206ENST00000638536 KLRC3Q07444 240 aa25.78■■□□□ 1.72
SCN1B-206ENST00000638536 KIF22Q14807 665 aa25.78■■□□□ 1.72
SCN1B-206ENST00000638536 PAGR1Q9BTK6 254 aa25.78■■□□□ 1.72
SCN1B-206ENST00000638536 FMNL1O95466 1100 aaPredicted RBP25.77■■□□□ 1.72
SCN1B-206ENST00000638536 NDUFB10O96000 172 aa25.77■■□□□ 1.72
SCN1B-206ENST00000638536 PKN2Q16513 984 aaKnown RBP25.77■■□□□ 1.72
SCN1B-206ENST00000638536 FAM83BQ5T0W9 1011 aa25.77■■□□□ 1.72
SCN1B-206ENST00000638536 FBXO46Q6PJ61 603 aaPredicted RBP25.77■■□□□ 1.72
SCN1B-206ENST00000638536 CHMP4CQ96CF2 233 aa25.77■■□□□ 1.72
SCN1B-206ENST00000638536 GOPCQ9HD26 462 aa25.77■■□□□ 1.72
SCN1B-206ENST00000638536 FBXO28Q9NVF7 368 aa25.77■■□□□ 1.72
SCN1B-206ENST00000638536 CTNNA3Q9UI47 895 aa25.77■■□□□ 1.72
SCN1B-206ENST00000638536 COL11A1P12107 1806 aaPredicted RBP25.77■■□□□ 1.72
SCN1B-206ENST00000638536 WDR46O15213 610 aaKnown RBP25.77■■□□□ 1.72
SCN1B-206ENST00000638536 IMMTQ16891 758 aaKnown RBP25.77■■□□□ 1.72
SCN1B-206ENST00000638536 BTBD7Q9P203 1132 aa25.77■■□□□ 1.72
SCN1B-206ENST00000638536 HPS5Q9UPZ3 1129 aa25.77■■□□□ 1.72
SCN1B-206ENST00000638536 CYP21A2P08686 494 aa25.76■■□□□ 1.71
SCN1B-206ENST00000638536 COG2Q14746 738 aa25.76■■□□□ 1.71
SCN1B-206ENST00000638536 RASGRP2Q7LDG7 609 aa25.76■■□□□ 1.71
SCN1B-206ENST00000638536 MAP4K1Q92918 833 aa25.76■■□□□ 1.71
SCN1B-206ENST00000638536 STX8Q9UNK0 236 aa25.76■■□□□ 1.71
SCN1B-206ENST00000638536 NOVP48745 357 aa25.75■■□□□ 1.71
SCN1B-206ENST00000638536 ERVK-9P63128 1117 aa25.75■■□□□ 1.71
SCN1B-206ENST00000638536 ERVK-24P63145 666 aa25.75■■□□□ 1.71
SCN1B-206ENST00000638536 SAMD1Q6SPF0 538 aaPredicted RBP25.75■■□□□ 1.71
SCN1B-206ENST00000638536 LSG1Q9H089 658 aaKnown RBP25.75■■□□□ 1.71
SCN1B-206ENST00000638536 GABRQQ9UN88 632 aa25.75■■□□□ 1.71
SCN1B-206ENST00000638536 PTCH2Q9Y6C5 1203 aa25.75■■□□□ 1.71
SCN1B-206ENST00000638536 A0A0G2JMZ2 1700 aa25.74■■□□□ 1.71
SCN1B-206ENST00000638536 B4E1Z4 1266 aa25.74■■□□□ 1.71
SCN1B-206ENST00000638536 CAPN15O75808 1086 aa25.74■■□□□ 1.71
SCN1B-206ENST00000638536 FLOT1O75955 427 aa25.74■■□□□ 1.71
SCN1B-206ENST00000638536 LBX2Q6XYB7 198 aa25.74■■□□□ 1.71
SCN1B-206ENST00000638536 GPRC5AQ8NFJ5 357 aa25.74■■□□□ 1.71
SCN1B-206ENST00000638536 ZKSCAN3Q9BRR0 538 aa25.74■■□□□ 1.71
SCN1B-206ENST00000638536 PORCNQ9H237 461 aa25.74■■□□□ 1.71
SCN1B-206ENST00000638536 RNF41Q9H4P4 317 aaPredicted RBP25.74■■□□□ 1.71
SCN1B-206ENST00000638536 PLXNB2O15031 1838 aa25.74■■□□□ 1.71
SCN1B-206ENST00000638536 PCP11498 1178 aaKnown RBP25.74■■□□□ 1.71
SCN1B-206ENST00000638536 DSG3P32926 999 aa25.74■■□□□ 1.71
SCN1B-206ENST00000638536 FCGRTP55899 365 aa25.74■■□□□ 1.71
SCN1B-206ENST00000638536 ATG4CQ96DT6 458 aa25.74■■□□□ 1.71
SCN1B-206ENST00000638536 SRRDQ9UH36 339 aa25.74■■□□□ 1.71
SCN1B-206ENST00000638536 KDM4AO75164 1064 aa25.73■■□□□ 1.71
SCN1B-206ENST00000638536 PRKCZQ05513 592 aa25.73■■□□□ 1.71
SCN1B-206ENST00000638536 RCSD1Q6JBY9 416 aa25.73■■□□□ 1.71
SCN1B-206ENST00000638536 TCP11L1Q9NUJ3 509 aa25.73■■□□□ 1.71
SCN1B-206ENST00000638536 RABGAP1Q9Y3P9 1069 aa25.73■■□□□ 1.71
SCN1B-206ENST00000638536 RBM8AQ9Y5S9 174 aaKnown RBP25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms