RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 PCNX4Q63HM2 1172 aa3.1□□□□□ -1.91
SCN1A-215ENST00000637285 ANKS4BQ8N8V4 417 aa3.1□□□□□ -1.91
SCN1A-215ENST00000637285 C3orf58Q8NDZ4 430 aa3.1□□□□□ -1.91
SCN1A-215ENST00000637285 LUC7LQ9NQ29 371 aaKnown RBP3.1□□□□□ -1.91
SCN1A-215ENST00000637285 SERPINA10Q9UK55 444 aa3.1□□□□□ -1.91
SCN1A-215ENST00000637285 CYP8B1Q9UNU6 501 aa3.1□□□□□ -1.91
SCN1A-215ENST00000637285 K7ESM1 405 aa3.09□□□□□ -1.91
SCN1A-215ENST00000637285 GRIN3BO60391 1043 aa3.09□□□□□ -1.91
SCN1A-215ENST00000637285 FSHBP01225 129 aa3.09□□□□□ -1.91
SCN1A-215ENST00000637285 CELA3AP09093 270 aa3.09□□□□□ -1.91
SCN1A-215ENST00000637285 GSTT1P30711 240 aa3.09□□□□□ -1.91
SCN1A-215ENST00000637285 CDR1P51861 262 aa3.09□□□□□ -1.91
SCN1A-215ENST00000637285 SLC14A2Q15849 920 aa3.09□□□□□ -1.91
SCN1A-215ENST00000637285 ZNF827Q17R98 1081 aa3.09□□□□□ -1.91
SCN1A-215ENST00000637285 SCARA3Q6AZY7 606 aa3.09□□□□□ -1.91
SCN1A-215ENST00000637285 FAM129CQ86XR2 697 aa3.09□□□□□ -1.91
SCN1A-215ENST00000637285 TMEFF1Q8IYR6 380 aa3.09□□□□□ -1.91
SCN1A-215ENST00000637285 LINC01356Q8N9X3 169 aa3.09□□□□□ -1.91
SCN1A-215ENST00000637285 DTWD2Q8NBA8 298 aa3.09□□□□□ -1.91
SCN1A-215ENST00000637285 MZB1Q8WU39 189 aa3.09□□□□□ -1.91
SCN1A-215ENST00000637285 DMRTB1Q96MA1 342 aa3.09□□□□□ -1.91
SCN1A-215ENST00000637285 PWWP2AQ96N64 755 aa3.09□□□□□ -1.91
SCN1A-215ENST00000637285 GPR62Q9BZJ7 368 aa3.09□□□□□ -1.91
SCN1A-215ENST00000637285 SRRDQ9UH36 339 aa3.09□□□□□ -1.91
SCN1A-215ENST00000637285 SNCAIPQ9Y6H5 919 aa3.09□□□□□ -1.91
SCN1A-215ENST00000637285 IRS4O14654 1257 aaPredicted RBP3.08□□□□□ -1.92
SCN1A-215ENST00000637285 LRRN2O75325 713 aa3.08□□□□□ -1.92
SCN1A-215ENST00000637285 EFEMP2O95967 443 aa3.08□□□□□ -1.92
SCN1A-215ENST00000637285 PGRP06401 933 aa3.08□□□□□ -1.92
SCN1A-215ENST00000637285 KCNC1P48547 511 aa3.08□□□□□ -1.92
SCN1A-215ENST00000637285 PLCB3Q01970 1234 aa3.08□□□□□ -1.92
SCN1A-215ENST00000637285 TEKQ02763 1124 aa3.08□□□□□ -1.92
SCN1A-215ENST00000637285 UBXN11Q5T124 520 aa3.08□□□□□ -1.92
SCN1A-215ENST00000637285 NLRX1Q86UT6 975 aa3.08□□□□□ -1.92
SCN1A-215ENST00000637285 SLC16A11Q8NCK7 471 aa3.08□□□□□ -1.92
SCN1A-215ENST00000637285 DNAJB8Q8NHS0 232 aa3.08□□□□□ -1.92
SCN1A-215ENST00000637285 TJP2Q9UDY2 1190 aa3.08□□□□□ -1.92
SCN1A-215ENST00000637285 KCNH3Q9ULD8 1083 aa3.08□□□□□ -1.92
SCN1A-215ENST00000637285 PNMA6FA0A0J9YX94 578 aa3.07□□□□□ -1.92
SCN1A-215ENST00000637285 NOTOA8MTQ0 251 aa3.07□□□□□ -1.92
SCN1A-215ENST00000637285 HRKO00198 91 aa3.07□□□□□ -1.92
SCN1A-215ENST00000637285 USP2O75604 605 aaPredicted RBP3.07□□□□□ -1.92
SCN1A-215ENST00000637285 TNFRSF1AP19438 455 aa3.07□□□□□ -1.92
SCN1A-215ENST00000637285 RPL10P27635 214 aaKnown RBP3.07□□□□□ -1.92
SCN1A-215ENST00000637285 NCKAP1LP55160 1127 aa3.07□□□□□ -1.92
SCN1A-215ENST00000637285 OLFML2BQ68BL8 750 aa3.07□□□□□ -1.92
SCN1A-215ENST00000637285 FERMT3Q86UX7 667 aa3.07□□□□□ -1.92
SCN1A-215ENST00000637285 TP53I13Q8NBR0 393 aaPredicted RBP3.07□□□□□ -1.92
SCN1A-215ENST00000637285 LINC01599Q8WXQ3 324 aa3.07□□□□□ -1.92
SCN1A-215ENST00000637285 GAL3ST3Q96A11 431 aa3.07□□□□□ -1.92
SCN1A-215ENST00000637285 ALKBH8Q96BT7 664 aaKnown RBP3.07□□□□□ -1.92
SCN1A-215ENST00000637285 TMEM87BQ96K49 555 aa3.07□□□□□ -1.92
SCN1A-215ENST00000637285 ZMYM5Q9UJ78 669 aa3.07□□□□□ -1.92
SCN1A-215ENST00000637285 PPM1HQ9ULR3 514 aa3.07□□□□□ -1.92
SCN1A-215ENST00000637285 CEP131Q9UPN4 1083 aa3.07□□□□□ -1.92
SCN1A-215ENST00000637285 MAGEA10P43363 369 aaPredicted RBP3.06□□□□□ -1.92
SCN1A-215ENST00000637285 HMGA2P52926 109 aa3.06□□□□□ -1.92
SCN1A-215ENST00000637285 YBX1P67809 324 aaKnown RBP3.06□□□□□ -1.92
SCN1A-215ENST00000637285 CLEC16AQ2KHT3 1053 aa3.06□□□□□ -1.92
SCN1A-215ENST00000637285 SLC6A19Q695T7 634 aa3.06□□□□□ -1.92
SCN1A-215ENST00000637285 CEP128Q6ZU80 1094 aa3.06□□□□□ -1.92
SCN1A-215ENST00000637285 IGDCC3Q8IVU1 814 aa3.06□□□□□ -1.92
SCN1A-215ENST00000637285 MRPL41Q8IXM3 137 aaKnown RBP3.06□□□□□ -1.92
SCN1A-215ENST00000637285 G6PC3Q9BUM1 346 aa3.06□□□□□ -1.92
SCN1A-215ENST00000637285 USP40Q9NVE5 1235 aa3.06□□□□□ -1.92
SCN1A-215ENST00000637285 ABLIM1O14639 778 aa3.05□□□□□ -1.92
SCN1A-215ENST00000637285 MATN3O15232 486 aa3.05□□□□□ -1.92
SCN1A-215ENST00000637285 BUB1BO60566 1050 aaPredicted RBP3.05□□□□□ -1.92
SCN1A-215ENST00000637285 PNLIPP16233 465 aa3.05□□□□□ -1.92
SCN1A-215ENST00000637285 LMNB1P20700 586 aa3.05□□□□□ -1.92
SCN1A-215ENST00000637285 SLURP1P55000 103 aa3.05□□□□□ -1.92
SCN1A-215ENST00000637285 TMC6Q7Z403 805 aa3.05□□□□□ -1.92
SCN1A-215ENST00000637285 WAPLQ7Z5K2 1190 aa3.05□□□□□ -1.92
SCN1A-215ENST00000637285 LDHDQ86WU2 507 aa3.05□□□□□ -1.92
SCN1A-215ENST00000637285 VWCEQ96DN2 955 aa3.05□□□□□ -1.92
SCN1A-215ENST00000637285 SORCS2Q96PQ0 1159 aa3.05□□□□□ -1.92
SCN1A-215ENST00000637285 RBCK1Q9BYM8 510 aa3.05□□□□□ -1.92
SCN1A-215ENST00000637285 CRTAC1Q9NQ79 661 aa3.05□□□□□ -1.92
SCN1A-215ENST00000637285 SHISA3A0PJX4 238 aa3.04□□□□□ -1.92
SCN1A-215ENST00000637285 ARID3CA6NKF2 412 aa3.04□□□□□ -1.92
SCN1A-215ENST00000637285 GFRA2O00451 464 aa3.04□□□□□ -1.92
SCN1A-215ENST00000637285 FFAR3O14843 346 aa3.04□□□□□ -1.92
SCN1A-215ENST00000637285 NRDCO43847 1150 aa3.04□□□□□ -1.92
SCN1A-215ENST00000637285 MPOP05164 745 aa3.04□□□□□ -1.92
SCN1A-215ENST00000637285 LIMS1P48059 325 aa3.04□□□□□ -1.92
SCN1A-215ENST00000637285 TNNI2P48788 182 aa3.04□□□□□ -1.92
SCN1A-215ENST00000637285 ADAM17P78536 824 aa3.04□□□□□ -1.92
SCN1A-215ENST00000637285 SEPT6Q14141 434 aa3.04□□□□□ -1.92
SCN1A-215ENST00000637285 RAB3GAP1Q15042 981 aa3.04□□□□□ -1.92
SCN1A-215ENST00000637285 ZFYVE27Q5T4F4 411 aa3.04□□□□□ -1.92
SCN1A-215ENST00000637285 NT5DC1Q5TFE4 455 aa3.04□□□□□ -1.92
SCN1A-215ENST00000637285 TTBK2Q6IQ55 1244 aa3.04□□□□□ -1.92
SCN1A-215ENST00000637285 TMC7Q7Z402 723 aa3.04□□□□□ -1.92
SCN1A-215ENST00000637285 LSRQ86X29 649 aaPredicted RBP3.04□□□□□ -1.92
SCN1A-215ENST00000637285 MCATQ8IVS2 390 aaKnown RBP3.04□□□□□ -1.92
SCN1A-215ENST00000637285 ADGRG2Q8IZP9 1017 aa3.04□□□□□ -1.92
SCN1A-215ENST00000637285 ACSF2Q96CM8 615 aaPredicted RBP3.04□□□□□ -1.92
SCN1A-215ENST00000637285 PLCD4Q9BRC7 762 aa3.04□□□□□ -1.92
SCN1A-215ENST00000637285 OSBPL7Q9BZF2 842 aa3.04□□□□□ -1.92
SCN1A-215ENST00000637285 SMPD4Q9NXE4 827 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms