RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 CHADLQ6NUI6 762 aa15.61■□□□□ 0.09
LINC00643-207ENST00000637212 MICU3Q86XE3 530 aa15.61■□□□□ 0.09
LINC00643-207ENST00000637212 GMCL1P1Q8NEA9 526 aa15.61■□□□□ 0.09
LINC00643-207ENST00000637212 CTCFLQ8NI51 663 aaPredicted RBP15.61■□□□□ 0.09
LINC00643-207ENST00000637212 WDR18Q9BV38 432 aa15.61■□□□□ 0.09
LINC00643-207ENST00000637212 SNHG28P0DPA3 235 aa15.6■□□□□ 0.09
LINC00643-207ENST00000637212 INPP5BP32019 993 aa15.6■□□□□ 0.09
LINC00643-207ENST00000637212 ADD1P35611 737 aaKnown RBP15.6■□□□□ 0.09
LINC00643-207ENST00000637212 HMGN5P82970 282 aaKnown RBP15.6■□□□□ 0.09
LINC00643-207ENST00000637212 ATP2B2Q01814 1243 aa15.6■□□□□ 0.09
LINC00643-207ENST00000637212 GRM4Q14833 912 aa15.6■□□□□ 0.09
LINC00643-207ENST00000637212 SHROOM1Q2M3G4 852 aaPredicted RBP15.6■□□□□ 0.09
LINC00643-207ENST00000637212 DLK2Q6UY11 383 aa15.6■□□□□ 0.09
LINC00643-207ENST00000637212 SMARCC2Q8TAQ2 1214 aa15.6■□□□□ 0.09
LINC00643-207ENST00000637212 MYL10Q9BUA6 226 aa15.6■□□□□ 0.09
LINC00643-207ENST00000637212 AS3MTQ9HBK9 375 aa15.6■□□□□ 0.09
LINC00643-207ENST00000637212 NCOA5Q9HCD5 579 aaKnown RBP15.6■□□□□ 0.09
LINC00643-207ENST00000637212 SMC3Q9UQE7 1217 aa15.6■□□□□ 0.09
LINC00643-207ENST00000637212 CEP350Q5VT06 3117 aa15.59■□□□□ 0.09
LINC00643-207ENST00000637212 PALM3A6NDB9 673 aaPredicted RBP15.59■□□□□ 0.09
LINC00643-207ENST00000637212 IFNAR1P17181 557 aa15.59■□□□□ 0.09
LINC00643-207ENST00000637212 PTPRAP18433 802 aa15.59■□□□□ 0.09
LINC00643-207ENST00000637212 CDC27P30260 824 aa15.59■□□□□ 0.09
LINC00643-207ENST00000637212 NTRK3Q16288 839 aa15.59■□□□□ 0.09
LINC00643-207ENST00000637212 ANKRD13AQ8IZ07 590 aa15.59■□□□□ 0.09
LINC00643-207ENST00000637212 DCAF4Q8WV16 495 aa15.59■□□□□ 0.09
LINC00643-207ENST00000637212 ZKSCAN4Q969J2 545 aaPredicted RBP15.59■□□□□ 0.09
LINC00643-207ENST00000637212 GMCL1Q96IK5 515 aa15.59■□□□□ 0.09
LINC00643-207ENST00000637212 CSADQ9Y600 493 aa15.59■□□□□ 0.09
LINC00643-207ENST00000637212 A0A1W2PRG0 241 aa15.58■□□□□ 0.08
LINC00643-207ENST00000637212 F5H6K3 240 aa15.58■□□□□ 0.08
LINC00643-207ENST00000637212 CTDNEP1O95476 244 aa15.58■□□□□ 0.08
LINC00643-207ENST00000637212 ITGBL1O95965 494 aaPredicted RBP15.58■□□□□ 0.08
LINC00643-207ENST00000637212 PARP1P09874 1014 aaKnown RBP15.58■□□□□ 0.08
LINC00643-207ENST00000637212 PDHBP11177 359 aa15.58■□□□□ 0.08
LINC00643-207ENST00000637212 RXRAP19793 462 aa15.58■□□□□ 0.08
LINC00643-207ENST00000637212 KLRC3Q07444 240 aa15.58■□□□□ 0.08
LINC00643-207ENST00000637212 ASPRV1Q53RT3 343 aa15.58■□□□□ 0.08
LINC00643-207ENST00000637212 GPATCH4Q5T3I0 446 aaKnown RBP15.58■□□□□ 0.08
LINC00643-207ENST00000637212 LDLRAD1Q5T700 205 aa15.58■□□□□ 0.08
LINC00643-207ENST00000637212 SLFN13Q68D06 897 aa15.58■□□□□ 0.08
LINC00643-207ENST00000637212 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.58■□□□□ 0.08
LINC00643-207ENST00000637212 SPRYD3Q8NCJ5 442 aa15.58■□□□□ 0.08
LINC00643-207ENST00000637212 RGS22Q8NE09 1264 aa15.58■□□□□ 0.08
LINC00643-207ENST00000637212 NSUN7Q8NE18 718 aaKnown RBP15.58■□□□□ 0.08
LINC00643-207ENST00000637212 KIAA1683Q9H0B3 1180 aa15.58■□□□□ 0.08
LINC00643-207ENST00000637212 GOPCQ9HD26 462 aa15.58■□□□□ 0.08
LINC00643-207ENST00000637212 MAD2L2Q9UI95 211 aa15.58■□□□□ 0.08
LINC00643-207ENST00000637212 KIF3AQ9Y496 699 aa15.58■□□□□ 0.08
LINC00643-207ENST00000637212 SSC5DA1L4H1 1573 aa15.58■□□□□ 0.08
LINC00643-207ENST00000637212 SIPA1L1O43166 1804 aa15.57■□□□□ 0.08
LINC00643-207ENST00000637212 C19orf81C9J6K1 198 aa15.57■□□□□ 0.08
LINC00643-207ENST00000637212 TRAF5O00463 557 aa15.57■□□□□ 0.08
LINC00643-207ENST00000637212 DDIT3P35638 169 aa15.57■□□□□ 0.08
LINC00643-207ENST00000637212 USP14P54578 494 aa15.57■□□□□ 0.08
LINC00643-207ENST00000637212 PRKG1Q13976 671 aa15.57■□□□□ 0.08
LINC00643-207ENST00000637212 TTLL12Q14166 644 aaPredicted RBP15.57■□□□□ 0.08
LINC00643-207ENST00000637212 TMTC3Q6ZXV5 915 aa15.57■□□□□ 0.08
LINC00643-207ENST00000637212 RAB11FIP4Q86YS3 637 aa15.57■□□□□ 0.08
LINC00643-207ENST00000637212 CLEC10AQ8IUN9 316 aa15.57■□□□□ 0.08
LINC00643-207ENST00000637212 CCDC144CPQ8IYA2 1237 aa15.57■□□□□ 0.08
LINC00643-207ENST00000637212 LRRC47Q8N1G4 583 aaKnown RBP15.57■□□□□ 0.08
LINC00643-207ENST00000637212 ACER1Q8TDN7 264 aa15.57■□□□□ 0.08
LINC00643-207ENST00000637212 CIZ1Q9ULV3 898 aaPredicted RBP15.57■□□□□ 0.08
LINC00643-207ENST00000637212 USP17L10C9JJH3 530 aa15.56■□□□□ 0.08
LINC00643-207ENST00000637212 KLRF2D3W0D1 207 aa15.56■□□□□ 0.08
LINC00643-207ENST00000637212 PRPF3O43395 683 aaKnown RBP15.56■□□□□ 0.08
LINC00643-207ENST00000637212 FMNL1O95466 1100 aaPredicted RBP15.56■□□□□ 0.08
LINC00643-207ENST00000637212 PDCP20941 246 aa15.56■□□□□ 0.08
LINC00643-207ENST00000637212 GJB2P29033 226 aa15.56■□□□□ 0.08
LINC00643-207ENST00000637212 SSRP1Q08945 709 aaKnown RBP15.56■□□□□ 0.08
LINC00643-207ENST00000637212 ZNF543Q08ER8 600 aa15.56■□□□□ 0.08
LINC00643-207ENST00000637212 FUT2Q10981 343 aa15.56■□□□□ 0.08
LINC00643-207ENST00000637212 VGLL4Q14135 290 aa15.56■□□□□ 0.08
LINC00643-207ENST00000637212 USP17L2Q6R6M4 530 aa15.56■□□□□ 0.08
LINC00643-207ENST00000637212 NBPF11Q86T75 865 aa15.56■□□□□ 0.08
LINC00643-207ENST00000637212 TRIM22Q8IYM9 498 aa15.56■□□□□ 0.08
LINC00643-207ENST00000637212 C2orf69Q8N8R5 385 aa15.56■□□□□ 0.08
LINC00643-207ENST00000637212 ZNF280CQ8ND82 737 aa15.56■□□□□ 0.08
LINC00643-207ENST00000637212 RBM46Q8TBY0 533 aaKnown RBP15.56■□□□□ 0.08
LINC00643-207ENST00000637212 WASF1Q92558 559 aa15.56■□□□□ 0.08
LINC00643-207ENST00000637212 VCPKMTQ9H867 229 aa15.56■□□□□ 0.08
LINC00643-207ENST00000637212 FOXD4L1Q9NU39 408 aa15.56■□□□□ 0.08
LINC00643-207ENST00000637212 RBM27Q9P2N5 1060 aaKnown RBP15.56■□□□□ 0.08
LINC00643-207ENST00000637212 ZHX2Q9Y6X8 837 aa15.56■□□□□ 0.08
LINC00643-207ENST00000637212 PTPDC1A2A3K4 754 aa15.55■□□□□ 0.08
LINC00643-207ENST00000637212 PLA2G6O60733 806 aa15.55■□□□□ 0.08
LINC00643-207ENST00000637212 NDUFB10O96000 172 aa15.55■□□□□ 0.08
LINC00643-207ENST00000637212 ECE1P42892 770 aa15.55■□□□□ 0.08
LINC00643-207ENST00000637212 SLC1A4P43007 532 aa15.55■□□□□ 0.08
LINC00643-207ENST00000637212 BACE1P56817 501 aa15.55■□□□□ 0.08
LINC00643-207ENST00000637212 PPATQ06203 517 aa15.55■□□□□ 0.08
LINC00643-207ENST00000637212 SRBD1Q8N5C6 995 aaKnown RBP15.55■□□□□ 0.08
LINC00643-207ENST00000637212 FAM184AQ8NB25 1140 aa15.55■□□□□ 0.08
LINC00643-207ENST00000637212 LPAR1Q92633 364 aa15.55■□□□□ 0.08
LINC00643-207ENST00000637212 RNF26Q9BY78 433 aaPredicted RBP15.55■□□□□ 0.08
LINC00643-207ENST00000637212 ORC3Q9UBD5 711 aaPredicted RBP15.55■□□□□ 0.08
LINC00643-207ENST00000637212 FZD1Q9UP38 647 aa15.55■□□□□ 0.08
LINC00643-207ENST00000637212 AFG3L2Q9Y4W6 797 aa15.55■□□□□ 0.08
LINC00643-207ENST00000637212 SNCAIPQ9Y6H5 919 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms