RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 CEP89Q96ST8 783 aa17.55■□□□□ 0.4
CACNA1A-235ENST00000637004 HAUS4Q9H6D7 363 aa17.55■□□□□ 0.4
CACNA1A-235ENST00000637004 TOMM22Q9NS69 142 aa17.55■□□□□ 0.4
CACNA1A-235ENST00000637004 LRRC10BA6NIK2 292 aa17.55■□□□□ 0.4
CACNA1A-235ENST00000637004 EBAG9O00559 213 aa17.55■□□□□ 0.4
CACNA1A-235ENST00000637004 SCARF1Q14162 830 aa17.55■□□□□ 0.4
CACNA1A-235ENST00000637004 GJD4Q96KN9 370 aaPredicted RBP17.55■□□□□ 0.4
CACNA1A-235ENST00000637004 MYL10Q9BUA6 226 aa17.55■□□□□ 0.4
CACNA1A-235ENST00000637004 AATFQ9NY61 560 aaKnown RBP eCLIP17.55■□□□□ 0.4
CACNA1A-235ENST00000637004 LIMA1Q9UHB6 759 aaKnown RBP17.55■□□□□ 0.4
CACNA1A-235ENST00000637004 SAR1BQ9Y6B6 198 aa17.55■□□□□ 0.4
CACNA1A-235ENST00000637004 EPN1Q9Y6I3 576 aaPredicted RBP17.55■□□□□ 0.4
CACNA1A-235ENST00000637004 ERLIN2O94905 339 aa17.54■□□□□ 0.4
CACNA1A-235ENST00000637004 MYCNP04198 464 aaPredicted RBP17.54■□□□□ 0.4
CACNA1A-235ENST00000637004 AFMP43652 599 aa17.54■□□□□ 0.4
CACNA1A-235ENST00000637004 CCDC57Q2TAC2 916 aa17.54■□□□□ 0.4
CACNA1A-235ENST00000637004 CCDC91Q7Z6B0 441 aa17.54■□□□□ 0.4
CACNA1A-235ENST00000637004 GUCA1BQ9UMX6 200 aa17.54■□□□□ 0.4
CACNA1A-235ENST00000637004 SLIT2O94813 1529 aa17.54■□□□□ 0.4
CACNA1A-235ENST00000637004 KRT9P35527 623 aa17.54■□□□□ 0.4
CACNA1A-235ENST00000637004 CCT6AP40227 531 aaKnown RBP17.54■□□□□ 0.4
CACNA1A-235ENST00000637004 USP49Q70CQ1 688 aa17.54■□□□□ 0.4
CACNA1A-235ENST00000637004 PAGE5Q96GU1 130 aa17.54■□□□□ 0.4
CACNA1A-235ENST00000637004 TRPC5Q9UL62 973 aaPredicted RBP17.54■□□□□ 0.4
CACNA1A-235ENST00000637004 KCNJ14Q9UNX9 436 aa17.54■□□□□ 0.4
CACNA1A-235ENST00000637004 PPP1R3GB7ZBB8 358 aa17.53■□□□□ 0.4
CACNA1A-235ENST00000637004 KRT31Q15323 416 aa17.53■□□□□ 0.4
CACNA1A-235ENST00000637004 SH3RF1Q7Z6J0 888 aa17.53■□□□□ 0.4
CACNA1A-235ENST00000637004 IFNL2Q8IZJ0 200 aa17.53■□□□□ 0.4
CACNA1A-235ENST00000637004 EHBP1Q8NDI1 1231 aa17.53■□□□□ 0.4
CACNA1A-235ENST00000637004 ZC3H4Q9UPT8 1303 aaKnown RBP17.53■□□□□ 0.4
CACNA1A-235ENST00000637004 UBE2Q2LH0YL09 131 aa17.53■□□□□ 0.4
CACNA1A-235ENST00000637004 NDUFA10O95299 355 aa17.53■□□□□ 0.4
CACNA1A-235ENST00000637004 TATP17735 454 aaPredicted RBP17.53■□□□□ 0.4
CACNA1A-235ENST00000637004 ADD2P35612 726 aa17.53■□□□□ 0.4
CACNA1A-235ENST00000637004 GGCXP38435 758 aa17.53■□□□□ 0.4
CACNA1A-235ENST00000637004 USP8P40818 1118 aa17.53■□□□□ 0.4
CACNA1A-235ENST00000637004 GOLGA6CA6NDK9 693 aa17.53■□□□□ 0.4
CACNA1A-235ENST00000637004 EXOC5O00471 708 aa17.53■□□□□ 0.4
CACNA1A-235ENST00000637004 IFIT3O14879 490 aaKnown RBP17.53■□□□□ 0.4
CACNA1A-235ENST00000637004 GOLGA6DP0CG33 693 aa17.53■□□□□ 0.4
CACNA1A-235ENST00000637004 GOLGA6AQ9NYA3 693 aa17.53■□□□□ 0.4
CACNA1A-235ENST00000637004 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.53■□□□□ 0.4
CACNA1A-235ENST00000637004 DEXIO95424 95 aa17.52■□□□□ 0.4
CACNA1A-235ENST00000637004 DPYDQ12882 1025 aa17.52■□□□□ 0.4
CACNA1A-235ENST00000637004 PAPD7Q5XG87 772 aaKnown RBP17.52■□□□□ 0.4
CACNA1A-235ENST00000637004 ZNF772Q68DY9 489 aaPredicted RBP17.52■□□□□ 0.4
CACNA1A-235ENST00000637004 GBP6Q6ZN66 633 aa17.52■□□□□ 0.4
CACNA1A-235ENST00000637004 NKX2-3Q8TAU0 364 aa17.52■□□□□ 0.4
CACNA1A-235ENST00000637004 MMS19Q96T76 1030 aa17.52■□□□□ 0.4
CACNA1A-235ENST00000637004 GUCY1A2P33402 732 aa17.52■□□□□ 0.39
CACNA1A-235ENST00000637004 PPFIA1Q13136 1202 aa17.52■□□□□ 0.39
CACNA1A-235ENST00000637004 TTF1Q15361 905 aaPredicted RBP17.52■□□□□ 0.39
CACNA1A-235ENST00000637004 IQCEQ6IPM2 695 aa17.52■□□□□ 0.39
CACNA1A-235ENST00000637004 CCDC70Q6NSX1 233 aa17.52■□□□□ 0.39
CACNA1A-235ENST00000637004 DCAF5Q96JK2 942 aa17.52■□□□□ 0.39
CACNA1A-235ENST00000637004 CTNND2Q9UQB3 1225 aa17.52■□□□□ 0.39
CACNA1A-235ENST00000637004 CCDC196A0A1B0GTZ2 297 aa17.51■□□□□ 0.39
CACNA1A-235ENST00000637004 GOLGA6BA6NDN3 693 aa17.51■□□□□ 0.39
CACNA1A-235ENST00000637004 TRIM75PA6NK02 468 aa17.51■□□□□ 0.39
CACNA1A-235ENST00000637004 CCT5P48643 541 aa17.51■□□□□ 0.39
CACNA1A-235ENST00000637004 IRAK1P51617 712 aa17.51■□□□□ 0.39
CACNA1A-235ENST00000637004 COPB1P53618 953 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-235ENST00000637004 POTEDQ86YR6 584 aa17.51■□□□□ 0.39
CACNA1A-235ENST00000637004 SPATA31A1Q5TZJ5 1347 aa17.51■□□□□ 0.39
CACNA1A-235ENST00000637004 NID2Q14112 1375 aa17.51■□□□□ 0.39
CACNA1A-235ENST00000637004 SHTN1A0MZ66 631 aa17.51■□□□□ 0.39
CACNA1A-235ENST00000637004 NR5A1Q13285 461 aa17.51■□□□□ 0.39
CACNA1A-235ENST00000637004 UBE3CQ15386 1083 aa17.51■□□□□ 0.39
CACNA1A-235ENST00000637004 VPS72Q15906 364 aa17.51■□□□□ 0.39
CACNA1A-235ENST00000637004 RTN1Q16799 776 aa17.51■□□□□ 0.39
CACNA1A-235ENST00000637004 SKIDA1Q1XH10 827 aa17.51■□□□□ 0.39
CACNA1A-235ENST00000637004 TSR1Q2NL82 804 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-235ENST00000637004 SMYD4Q8IYR2 804 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-235ENST00000637004 RIN2Q8WYP3 895 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-235ENST00000637004 SELENOOQ9BVL4 669 aa17.51■□□□□ 0.39
CACNA1A-235ENST00000637004 KAT14Q9H8E8 782 aa17.51■□□□□ 0.39
CACNA1A-235ENST00000637004 FAM169AQ9Y6X4 670 aa17.51■□□□□ 0.39
CACNA1A-235ENST00000637004 SCN11AQ9UI33 1791 aa17.51■□□□□ 0.39
CACNA1A-235ENST00000637004 ATRNO75882 1429 aa17.51■□□□□ 0.39
CACNA1A-235ENST00000637004 BMP15O95972 392 aa17.5■□□□□ 0.39
CACNA1A-235ENST00000637004 RXRBP28702 533 aa17.5■□□□□ 0.39
CACNA1A-235ENST00000637004 PI16Q6UXB8 463 aa17.5■□□□□ 0.39
CACNA1A-235ENST00000637004 CCNI2Q6ZMN8 369 aaPredicted RBP17.5■□□□□ 0.39
CACNA1A-235ENST00000637004 OR8K1Q8NGG5 319 aa17.5■□□□□ 0.39
CACNA1A-235ENST00000637004 VPS16Q9H269 839 aa17.5■□□□□ 0.39
CACNA1A-235ENST00000637004 CABP5Q9NP86 173 aa17.5■□□□□ 0.39
CACNA1A-235ENST00000637004 RWDD2AQ9UIY3 292 aa17.5■□□□□ 0.39
CACNA1A-235ENST00000637004 SPATA31A5Q5VU36 1347 aa17.5■□□□□ 0.39
CACNA1A-235ENST00000637004 SPATA31A7Q8IWB4 1347 aa17.5■□□□□ 0.39
CACNA1A-235ENST00000637004 LOC102724159A0A0B4J2E5 919 aa17.5■□□□□ 0.39
CACNA1A-235ENST00000637004 ENC1O14682 589 aa17.5■□□□□ 0.39
CACNA1A-235ENST00000637004 SF3B2Q13435 895 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-235ENST00000637004 PWP2Q15269 919 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-235ENST00000637004 FERMT2Q96AC1 680 aa17.5■□□□□ 0.39
CACNA1A-235ENST00000637004 CNNM2Q9H8M5 875 aa17.5■□□□□ 0.39
CACNA1A-235ENST00000637004 REXO2Q9Y3B8 237 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-235ENST00000637004 CDC25AP30304 524 aa17.49■□□□□ 0.39
CACNA1A-235ENST00000637004 KRT83P78385 493 aa17.49■□□□□ 0.39
CACNA1A-235ENST00000637004 SART3Q15020 963 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms