RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 MTA3Q9BTC8 594 aa18.82■□□□□ 0.6
CLN6-216ENST00000636876 C22orf23Q9BZE7 217 aa18.82■□□□□ 0.6
CLN6-216ENST00000636876 TM6SF1Q9BZW5 370 aa18.82■□□□□ 0.6
CLN6-216ENST00000636876 SYNPO2Q9UMS6 1093 aa18.82■□□□□ 0.6
CLN6-216ENST00000636876 WDR19Q8NEZ3 1342 aa18.81■□□□□ 0.6
CLN6-216ENST00000636876 CCL15-CCL14A0A0B4J2E2 113 aa18.81■□□□□ 0.6
CLN6-216ENST00000636876 TESPA1A2RU30 521 aaPredicted RBP18.81■□□□□ 0.6
CLN6-216ENST00000636876 IFIT3O14879 490 aaKnown RBP18.81■□□□□ 0.6
CLN6-216ENST00000636876 CASTP20810 708 aaKnown RBP18.81■□□□□ 0.6
CLN6-216ENST00000636876 MAP2K2P36507 400 aa18.81■□□□□ 0.6
CLN6-216ENST00000636876 SART3Q15020 963 aaKnown RBP18.81■□□□□ 0.6
CLN6-216ENST00000636876 SEC23AQ15436 765 aa18.81■□□□□ 0.6
CLN6-216ENST00000636876 CCL15Q16663 113 aa18.81■□□□□ 0.6
CLN6-216ENST00000636876 BLOC1S2Q6QNY1 142 aa18.81■□□□□ 0.6
CLN6-216ENST00000636876 DHX32Q7L7V1 743 aaKnown RBP18.81■□□□□ 0.6
CLN6-216ENST00000636876 ANKS1AQ92625 1134 aa18.81■□□□□ 0.6
CLN6-216ENST00000636876 C12orf42Q96LP6 360 aa18.81■□□□□ 0.6
CLN6-216ENST00000636876 EMILIN3Q9NT22 766 aa18.81■□□□□ 0.6
CLN6-216ENST00000636876 TOP1P11387 765 aaKnown RBP18.8■□□□□ 0.6
CLN6-216ENST00000636876 RBM25P49756 843 aaKnown RBP18.8■□□□□ 0.6
CLN6-216ENST00000636876 INHBEP58166 350 aa18.8■□□□□ 0.6
CLN6-216ENST00000636876 EXOSC10Q01780 885 aaKnown RBP18.8■□□□□ 0.6
CLN6-216ENST00000636876 SREBF2Q12772 1141 aa18.8■□□□□ 0.6
CLN6-216ENST00000636876 DGKZQ13574 1117 aa18.8■□□□□ 0.6
CLN6-216ENST00000636876 GADL1Q6ZQY3 521 aa18.8■□□□□ 0.6
CLN6-216ENST00000636876 FASTKD5Q7L8L6 764 aaKnown RBP18.8■□□□□ 0.6
CLN6-216ENST00000636876 LRRC47Q8N1G4 583 aaKnown RBP18.8■□□□□ 0.6
CLN6-216ENST00000636876 PROCA1Q8NCQ7 364 aaPredicted RBP18.8■□□□□ 0.6
CLN6-216ENST00000636876 IGDCC4Q8TDY8 1250 aa18.8■□□□□ 0.6
CLN6-216ENST00000636876 TMEM87BQ96K49 555 aa18.8■□□□□ 0.6
CLN6-216ENST00000636876 TMEM47Q9BQJ4 181 aa18.8■□□□□ 0.6
CLN6-216ENST00000636876 VCPKMTQ9H867 229 aa18.8■□□□□ 0.6
CLN6-216ENST00000636876 TMOD4Q9NZQ9 345 aa18.8■□□□□ 0.6
CLN6-216ENST00000636876 LOC285556D6RIA3 1793 aa18.8■□□□□ 0.6
CLN6-216ENST00000636876 ERICH2A1L162 156 aa18.79■□□□□ 0.6
CLN6-216ENST00000636876 CPA1P15085 419 aa18.79■□□□□ 0.6
CLN6-216ENST00000636876 RPS6KB1P23443 525 aa18.79■□□□□ 0.6
CLN6-216ENST00000636876 TMEM67Q5HYA8 995 aa18.79■□□□□ 0.6
CLN6-216ENST00000636876 KIAA1755Q5JYT7 1200 aa18.79■□□□□ 0.6
CLN6-216ENST00000636876 IFIT1BQ5T764 474 aaKnown RBP18.79■□□□□ 0.6
CLN6-216ENST00000636876 REM2Q8IYK8 340 aaPredicted RBP18.79■□□□□ 0.6
CLN6-216ENST00000636876 ZSWIM6Q9HCJ5 1215 aa18.79■□□□□ 0.6
CLN6-216ENST00000636876 GOPCQ9HD26 462 aa18.79■□□□□ 0.6
CLN6-216ENST00000636876 SH2B2O14492 632 aaPredicted RBP18.78■□□□□ 0.6
CLN6-216ENST00000636876 TM4SF4P48230 202 aa18.78■□□□□ 0.6
CLN6-216ENST00000636876 WTAPQ15007 396 aa18.78■□□□□ 0.6
CLN6-216ENST00000636876 GPAT2Q6NUI2 795 aa18.78■□□□□ 0.6
CLN6-216ENST00000636876 GMCL1P1Q8NEA9 526 aa18.78■□□□□ 0.6
CLN6-216ENST00000636876 LPAR1Q92633 364 aa18.78■□□□□ 0.6
CLN6-216ENST00000636876 TCEANC2Q96MN5 208 aa18.78■□□□□ 0.6
CLN6-216ENST00000636876 TBC1D32Q96NH3 1257 aa18.78■□□□□ 0.6
CLN6-216ENST00000636876 PTPN18Q99952 460 aa18.78■□□□□ 0.6
CLN6-216ENST00000636876 LRRC2Q9BYS8 371 aa18.78■□□□□ 0.6
CLN6-216ENST00000636876 LY9Q9HBG7 655 aa18.78■□□□□ 0.6
CLN6-216ENST00000636876 GPHNQ9NQX3 736 aaPredicted RBP18.78■□□□□ 0.6
CLN6-216ENST00000636876 WBP1LQ9NX94 342 aa18.78■□□□□ 0.6
CLN6-216ENST00000636876 CYP46A1Q9Y6A2 500 aa18.78■□□□□ 0.6
CLN6-216ENST00000636876 BTBD19C9JJ37 291 aa18.77■□□□□ 0.6
CLN6-216ENST00000636876 F5H6K3 240 aa18.77■□□□□ 0.6
CLN6-216ENST00000636876 NDUFB10O96000 172 aa18.77■□□□□ 0.6
CLN6-216ENST00000636876 CTCFP49711 727 aaPredicted RBP18.77■□□□□ 0.6
CLN6-216ENST00000636876 KLRC3Q07444 240 aa18.77■□□□□ 0.6
CLN6-216ENST00000636876 RUFY3Q7L099 469 aa18.77■□□□□ 0.6
CLN6-216ENST00000636876 ANKRD23Q86SG2 305 aa18.77■□□□□ 0.6
CLN6-216ENST00000636876 UPF3BQ9BZI7 483 aaKnown RBP18.77■□□□□ 0.6
CLN6-216ENST00000636876 KAT14Q9H8E8 782 aa18.77■□□□□ 0.6
CLN6-216ENST00000636876 PRDM10Q9NQV6 1147 aa18.77■□□□□ 0.6
CLN6-216ENST00000636876 AGTPBP1Q9UPW5 1226 aa18.77■□□□□ 0.6
CLN6-216ENST00000636876 IGF2BP3O00425 579 aaKnown RBP eCLIP18.76■□□□□ 0.59
CLN6-216ENST00000636876 RAD21O60216 631 aa18.76■□□□□ 0.59
CLN6-216ENST00000636876 VCAM1P19320 739 aa18.76■□□□□ 0.59
CLN6-216ENST00000636876 LIFRP42702 1097 aa18.76■□□□□ 0.59
CLN6-216ENST00000636876 TREML2Q5T2D2 321 aa18.76■□□□□ 0.59
CLN6-216ENST00000636876 SLFN13Q68D06 897 aa18.76■□□□□ 0.59
CLN6-216ENST00000636876 IFNL1Q8IU54 200 aa18.76■□□□□ 0.59
CLN6-216ENST00000636876 SPICE1Q8N0Z3 855 aa18.76■□□□□ 0.59
CLN6-216ENST00000636876 PNMA1Q8ND90 353 aa18.76■□□□□ 0.59
CLN6-216ENST00000636876 SENP2Q9HC62 589 aa18.76■□□□□ 0.59
CLN6-216ENST00000636876 WDR46O15213 610 aaKnown RBP18.75■□□□□ 0.59
CLN6-216ENST00000636876 FAM43AQ8N2R8 423 aa18.75■□□□□ 0.59
CLN6-216ENST00000636876 TMTC2Q8N394 836 aa18.75■□□□□ 0.59
CLN6-216ENST00000636876 GMCL1Q96IK5 515 aa18.75■□□□□ 0.59
CLN6-216ENST00000636876 KIF2CQ99661 725 aa18.75■□□□□ 0.59
CLN6-216ENST00000636876 ZCCHC17Q9NP64 241 aaKnown RBP18.75■□□□□ 0.59
CLN6-216ENST00000636876 CASP8AP2Q9UKL3 1982 aa18.75■□□□□ 0.59
CLN6-216ENST00000636876 PDHXO00330 501 aa18.74■□□□□ 0.59
CLN6-216ENST00000636876 HSPA8P11142 646 aaKnown RBP18.74■□□□□ 0.59
CLN6-216ENST00000636876 LBX1P52954 281 aa18.74■□□□□ 0.59
CLN6-216ENST00000636876 PABPC4Q13310 644 aaKnown RBP eCLIP18.74■□□□□ 0.59
CLN6-216ENST00000636876 OTUD7BQ6GQQ9 843 aa18.74■□□□□ 0.59
CLN6-216ENST00000636876 Q6ZUG5 572 aa18.74■□□□□ 0.59
CLN6-216ENST00000636876 SGMS1Q86VZ5 419 aa18.74■□□□□ 0.59
CLN6-216ENST00000636876 DCAF4Q8WV16 495 aa18.74■□□□□ 0.59
CLN6-216ENST00000636876 NUP88Q99567 741 aaPredicted RBP18.74■□□□□ 0.59
CLN6-216ENST00000636876 RPAP3Q9H6T3 665 aaPredicted RBP18.74■□□□□ 0.59
CLN6-216ENST00000636876 MTMR7Q9Y216 660 aa18.74■□□□□ 0.59
CLN6-216ENST00000636876 SLC45A1Q9Y2W3 748 aa18.74■□□□□ 0.59
CLN6-216ENST00000636876 USP17L15C9J2P7 530 aa18.73■□□□□ 0.59
CLN6-216ENST00000636876 USP17L13C9JLJ4 530 aa18.73■□□□□ 0.59
CLN6-216ENST00000636876 USP17L11C9JVI0 530 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms