RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 ZFP42Q96MM3 310 aa6.59□□□□□ -1.35
SCN1A-212ENST00000636194 NPM3O75607 178 aaKnown RBP6.59□□□□□ -1.35
SCN1A-212ENST00000636194 SCG2P13521 617 aa6.59□□□□□ -1.35
SCN1A-212ENST00000636194 TJAP1Q5JTD0 557 aa6.59□□□□□ -1.35
SCN1A-212ENST00000636194 AKNAD1Q5T1N1 836 aa6.59□□□□□ -1.35
SCN1A-212ENST00000636194 KRT77Q7Z794 578 aa6.59□□□□□ -1.35
SCN1A-212ENST00000636194 TEX11Q8IYF3 940 aa6.59□□□□□ -1.35
SCN1A-212ENST00000636194 SMCR8Q8TEV9 937 aaPredicted RBP6.59□□□□□ -1.35
SCN1A-212ENST00000636194 GIPC2Q8TF65 315 aa6.59□□□□□ -1.35
SCN1A-212ENST00000636194 CENPKQ9BS16 269 aa6.59□□□□□ -1.35
SCN1A-212ENST00000636194 FOXP3Q9BZS1 431 aa6.59□□□□□ -1.35
SCN1A-212ENST00000636194 ACTR5Q9H9F9 607 aaPredicted RBP6.59□□□□□ -1.35
SCN1A-212ENST00000636194 KRT82Q9NSB4 513 aa6.59□□□□□ -1.35
SCN1A-212ENST00000636194 SYNPO2Q9UMS6 1093 aa6.59□□□□□ -1.35
SCN1A-212ENST00000636194 TNNQ9UQP3 1299 aa6.59□□□□□ -1.35
SCN1A-212ENST00000636194 H0YCG3 227 aa6.59□□□□□ -1.35
SCN1A-212ENST00000636194 ZBTB43O43298 467 aa6.59□□□□□ -1.35
SCN1A-212ENST00000636194 YARSP54577 528 aaKnown RBP6.59□□□□□ -1.35
SCN1A-212ENST00000636194 PPHLN1Q8NEY8 458 aaKnown RBP6.59□□□□□ -1.35
SCN1A-212ENST00000636194 PGBD1Q96JS3 809 aa6.59□□□□□ -1.35
SCN1A-212ENST00000636194 VPS18Q9P253 973 aa6.59□□□□□ -1.35
SCN1A-212ENST00000636194 ZBBXA8MT70 800 aa6.59□□□□□ -1.36
SCN1A-212ENST00000636194 CHEK2O96017 543 aa6.59□□□□□ -1.36
SCN1A-212ENST00000636194 EEF1B2P24534 225 aaKnown RBP6.59□□□□□ -1.36
SCN1A-212ENST00000636194 EVCP57679 992 aa6.59□□□□□ -1.36
SCN1A-212ENST00000636194 GOLGA8FQ08AF8 430 aa6.59□□□□□ -1.36
SCN1A-212ENST00000636194 GOLGA8DPQ0D2H9 430 aa6.59□□□□□ -1.36
SCN1A-212ENST00000636194 FAM69CQ0P6D2 419 aa6.59□□□□□ -1.36
SCN1A-212ENST00000636194 RAPGEF1Q13905 1077 aa6.59□□□□□ -1.36
SCN1A-212ENST00000636194 NUDT18Q6ZVK8 323 aa6.59□□□□□ -1.36
SCN1A-212ENST00000636194 CCDC186Q7Z3E2 898 aa6.59□□□□□ -1.36
SCN1A-212ENST00000636194 ARMC2Q8NEN0 867 aa6.59□□□□□ -1.36
SCN1A-212ENST00000636194 DDX21Q9NR30 783 aaKnown RBP eCLIP6.59□□□□□ -1.36
SCN1A-212ENST00000636194 DDX41Q9UJV9 622 aaKnown RBP6.59□□□□□ -1.36
SCN1A-212ENST00000636194 BIRC5O15392 142 aa6.59□□□□□ -1.36
SCN1A-212ENST00000636194 ABL1P00519 1130 aa6.59□□□□□ -1.36
SCN1A-212ENST00000636194 HSPA1AP0DMV8 641 aaKnown RBP6.59□□□□□ -1.36
SCN1A-212ENST00000636194 HSPA1BP0DMV9 641 aaKnown RBP6.59□□□□□ -1.36
SCN1A-212ENST00000636194 HSD3B2P26439 372 aa6.59□□□□□ -1.36
SCN1A-212ENST00000636194 ZC3H6P61129 1189 aaKnown RBP6.59□□□□□ -1.36
SCN1A-212ENST00000636194 CCDC85BQ15834 202 aaPredicted RBP6.59□□□□□ -1.36
SCN1A-212ENST00000636194 SMC5Q8IY18 1101 aa6.59□□□□□ -1.36
SCN1A-212ENST00000636194 OSCARQ8IYS5 282 aa6.59□□□□□ -1.36
SCN1A-212ENST00000636194 MMTAG2Q9BU76 263 aaKnown RBP6.59□□□□□ -1.36
SCN1A-212ENST00000636194 ZSWIM4Q9H7M6 989 aa6.59□□□□□ -1.36
SCN1A-212ENST00000636194 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.59□□□□□ -1.36
SCN1A-212ENST00000636194 PRG3Q9Y2Y8 225 aaPredicted RBP6.59□□□□□ -1.36
SCN1A-212ENST00000636194 ARHGAP6O43182 974 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 STAM2O75886 525 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 DRP2Q13474 957 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 HERC4Q5GLZ8 1057 aaPredicted RBP6.58□□□□□ -1.36
SCN1A-212ENST00000636194 OTUD6AQ7L8S5 288 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 RAB42Q8N4Z0 105 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 COG4Q9H9E3 785 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 RGL1Q9NZL6 768 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 KLHL14Q9P2G3 628 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 A0A1B0GVL5 298 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 ZNF75DP51815 510 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 DAB2P98082 770 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 UVSSAQ2YD98 709 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 SULT6B1Q6IMI4 303 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 C8orf74Q6P047 294 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 FASTKD5Q7L8L6 764 aaKnown RBP6.58□□□□□ -1.36
SCN1A-212ENST00000636194 RPAP2Q8IXW5 612 aaPredicted RBP6.58□□□□□ -1.36
SCN1A-212ENST00000636194 TADA1Q96BN2 335 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 CCDC85AQ96PX6 553 aaPredicted RBP6.58□□□□□ -1.36
SCN1A-212ENST00000636194 OSBPL10Q9BXB5 764 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 IFT122Q9HBG6 1241 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 PARVBQ9HBI1 364 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 STMN3Q9NZ72 180 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 ZNF219Q9P2Y4 722 aaPredicted RBP6.58□□□□□ -1.36
SCN1A-212ENST00000636194 NDUFAB1O14561 156 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 PMS1P54277 932 aaKnown RBP6.58□□□□□ -1.36
SCN1A-212ENST00000636194 PPP1R14AQ96A00 147 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 CUEDC2Q9H467 287 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 MPP6Q9NZW5 540 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 ZBTB21Q9ULJ3 1066 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 PDE4DIPQ5VU43 2346 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 CCDC169A6NNP5 214 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 C4BPBP20851 252 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 TNFAIP3P21580 790 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 TMOD1P28289 359 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 INPP5BP32019 993 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 DPYDQ12882 1025 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 GANCQ8TET4 914 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 MRPS27Q92552 414 aaKnown RBP6.58□□□□□ -1.36
SCN1A-212ENST00000636194 ZNF653Q96CK0 615 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 CCT7Q99832 543 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 ANO3Q9BYT9 981 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 GINS2Q9Y248 185 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 SUGT1Q9Y2Z0 365 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 EXOC5O00471 708 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 PABPC4Q13310 644 aaKnown RBP eCLIP6.58□□□□□ -1.36
SCN1A-212ENST00000636194 NBPF20Q3BBV1 942 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 MPRIPQ6WCQ1 1025 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 ELMOD1Q8N336 334 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 ADPGKQ9BRR6 497 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 BIN1O00499 593 aa6.58□□□□□ -1.36
SCN1A-212ENST00000636194 SART1O43290 800 aaKnown RBP6.58□□□□□ -1.36
SCN1A-212ENST00000636194 MCF2P10911 925 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms