RNA–Protein interactions for RNA: ENST00000635751.1

CLN8-208, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-208ENST00000635751 SCAND2PQ9GZW5 306 aaPredicted RBP23.13■■□□□ 1.29
CLN8-208ENST00000635751 SSC5DA1L4H1 1573 aa23.13■■□□□ 1.29
CLN8-208ENST00000635751 PLIN4Q96Q06 1357 aa23.13■■□□□ 1.29
CLN8-208ENST00000635751 PHF20L1A8MW92 1017 aa23.12■■□□□ 1.29
CLN8-208ENST00000635751 IFIT1BQ5T764 474 aaKnown RBP23.12■■□□□ 1.29
CLN8-208ENST00000635751 RCSD1Q6JBY9 416 aa23.12■■□□□ 1.29
CLN8-208ENST00000635751 NFXL1Q6ZNB6 911 aa23.12■■□□□ 1.29
CLN8-208ENST00000635751 SMARCC2Q8TAQ2 1214 aa23.12■■□□□ 1.29
CLN8-208ENST00000635751 CEP95Q96GE4 821 aa23.12■■□□□ 1.29
CLN8-208ENST00000635751 NAP1L2Q9ULW6 460 aaPredicted RBP23.12■■□□□ 1.29
CLN8-208ENST00000635751 MYH15Q9Y2K3 1946 aa23.12■■□□□ 1.29
CLN8-208ENST00000635751 KLF18A0A0U1RQI7 1052 aa23.12■■□□□ 1.29
CLN8-208ENST00000635751 TPRNQ4KMQ1 711 aa23.12■■□□□ 1.29
CLN8-208ENST00000635751 CCDC178Q5BJE1 867 aa23.12■■□□□ 1.29
CLN8-208ENST00000635751 TMTC2Q8N394 836 aa23.12■■□□□ 1.29
CLN8-208ENST00000635751 CDCA5Q96FF9 252 aa23.12■■□□□ 1.29
CLN8-208ENST00000635751 IGKV6D-41A0A0C4DH26 115 aa23.11■■□□□ 1.29
CLN8-208ENST00000635751 CCDC69A6NI79 296 aa23.11■■□□□ 1.29
CLN8-208ENST00000635751 GH2P01242 217 aa23.11■■□□□ 1.29
CLN8-208ENST00000635751 PRKG1Q13976 671 aa23.11■■□□□ 1.29
CLN8-208ENST00000635751 UVSSAQ2YD98 709 aa23.11■■□□□ 1.29
CLN8-208ENST00000635751 SGMS1Q86VZ5 419 aa23.11■■□□□ 1.29
CLN8-208ENST00000635751 LDHDQ86WU2 507 aa23.11■■□□□ 1.29
CLN8-208ENST00000635751 CLEC10AQ8IUN9 316 aa23.11■■□□□ 1.29
CLN8-208ENST00000635751 CHMP4CQ96CF2 233 aa23.11■■□□□ 1.29
CLN8-208ENST00000635751 ZNF341Q9BYN7 854 aa23.11■■□□□ 1.29
CLN8-208ENST00000635751 CABP5Q9NP86 173 aa23.11■■□□□ 1.29
CLN8-208ENST00000635751 STX8Q9UNK0 236 aa23.11■■□□□ 1.29
CLN8-208ENST00000635751 CAP2P40123 477 aa23.1■■□□□ 1.29
CLN8-208ENST00000635751 EVCP57679 992 aa23.1■■□□□ 1.29
CLN8-208ENST00000635751 SEPT2Q15019 361 aa23.1■■□□□ 1.29
CLN8-208ENST00000635751 DGKHQ86XP1 1220 aa23.1■■□□□ 1.29
CLN8-208ENST00000635751 MTMR4Q9NYA4 1195 aa23.1■■□□□ 1.29
CLN8-208ENST00000635751 GUCY1A2P33402 732 aa23.1■■□□□ 1.29
CLN8-208ENST00000635751 HMGN5P82970 282 aaKnown RBP23.1■■□□□ 1.29
CLN8-208ENST00000635751 TMEM179Q6ZVK1 233 aa23.1■■□□□ 1.29
CLN8-208ENST00000635751 RAB11FIP4Q86YS3 637 aa23.1■■□□□ 1.29
CLN8-208ENST00000635751 KIF3AQ9Y496 699 aa23.1■■□□□ 1.29
CLN8-208ENST00000635751 H3BQV1 296 aa23.09■■□□□ 1.29
CLN8-208ENST00000635751 PDIA3P30101 505 aaKnown RBP23.09■■□□□ 1.29
CLN8-208ENST00000635751 IFFO2Q5TF58 517 aa23.09■■□□□ 1.29
CLN8-208ENST00000635751 ANKS1AQ92625 1134 aa23.09■■□□□ 1.29
CLN8-208ENST00000635751 ZNF274Q96GC6 653 aaPredicted RBP23.09■■□□□ 1.29
CLN8-208ENST00000635751 ZSCAN16Q9H4T2 348 aaPredicted RBP23.09■■□□□ 1.29
CLN8-208ENST00000635751 SLC12A7Q9Y666 1083 aa23.09■■□□□ 1.29
CLN8-208ENST00000635751 DOCK1Q14185 1865 aa23.09■■□□□ 1.29
CLN8-208ENST00000635751 RESTQ13127 1097 aa23.08■■□□□ 1.29
CLN8-208ENST00000635751 FAM173BQ6P4H8 233 aa23.08■■□□□ 1.29
CLN8-208ENST00000635751 APOA5Q6Q788 366 aa23.08■■□□□ 1.29
CLN8-208ENST00000635751 NSUN7Q8NE18 718 aaKnown RBP23.08■■□□□ 1.29
CLN8-208ENST00000635751 SPATA32Q96LK8 384 aa23.08■■□□□ 1.29
CLN8-208ENST00000635751 MYL10Q9BUA6 226 aa23.08■■□□□ 1.29
CLN8-208ENST00000635751 ZNF112Q9UJU3 913 aa23.08■■□□□ 1.29
CLN8-208ENST00000635751 ZBTB21Q9ULJ3 1066 aa23.08■■□□□ 1.29
CLN8-208ENST00000635751 USP2O75604 605 aaPredicted RBP23.08■■□□□ 1.28
CLN8-208ENST00000635751 INPP5BP32019 993 aa23.08■■□□□ 1.28
CLN8-208ENST00000635751 NOVP48745 357 aa23.08■■□□□ 1.28
CLN8-208ENST00000635751 DDX11Q96FC9 970 aa23.08■■□□□ 1.28
CLN8-208ENST00000635751 WRNIP1Q96S55 665 aa23.08■■□□□ 1.28
CLN8-208ENST00000635751 TMEM47Q9BQJ4 181 aa23.08■■□□□ 1.28
CLN8-208ENST00000635751 KANSL2Q9H9L4 492 aa23.08■■□□□ 1.28
CLN8-208ENST00000635751 GPBP1L1Q9HC44 474 aaPredicted RBP23.08■■□□□ 1.28
CLN8-208ENST00000635751 CLIP2Q9UDT6 1046 aa23.08■■□□□ 1.28
CLN8-208ENST00000635751 GOLGA8BA8MQT2 603 aa23.07■■□□□ 1.28
CLN8-208ENST00000635751 TRAF5O00463 557 aa23.07■■□□□ 1.28
CLN8-208ENST00000635751 CTNND1O60716 968 aaKnown RBP23.07■■□□□ 1.28
CLN8-208ENST00000635751 RXRAP19793 462 aa23.07■■□□□ 1.28
CLN8-208ENST00000635751 MSNP26038 577 aaKnown RBP23.07■■□□□ 1.28
CLN8-208ENST00000635751 CCT2P78371 535 aaKnown RBP23.07■■□□□ 1.28
CLN8-208ENST00000635751 ATP2B2Q01814 1243 aa23.07■■□□□ 1.28
CLN8-208ENST00000635751 FMR1Q06787 632 aaKnown RBP eCLIP23.07■■□□□ 1.28
CLN8-208ENST00000635751 ZNF654Q8IZM8 581 aa23.07■■□□□ 1.28
CLN8-208ENST00000635751 KLRG1Q96E93 195 aa23.07■■□□□ 1.28
CLN8-208ENST00000635751 KAT14Q9H8E8 782 aa23.07■■□□□ 1.28
CLN8-208ENST00000635751 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.07■■□□□ 1.28
CLN8-208ENST00000635751 TTLL1O95922 423 aa23.06■■□□□ 1.28
CLN8-208ENST00000635751 NF2P35240 595 aa23.06■■□□□ 1.28
CLN8-208ENST00000635751 SYNE3Q6ZMZ3 975 aa23.06■■□□□ 1.28
CLN8-208ENST00000635751 HPS5Q9UPZ3 1129 aa23.06■■□□□ 1.28
CLN8-208ENST00000635751 OTOFQ9HC10 1997 aa23.06■■□□□ 1.28
CLN8-208ENST00000635751 PTPDC1A2A3K4 754 aa23.05■■□□□ 1.28
CLN8-208ENST00000635751 ZBTB43O43298 467 aa23.05■■□□□ 1.28
CLN8-208ENST00000635751 PPP1R12BO60237 982 aaPredicted RBP23.05■■□□□ 1.28
CLN8-208ENST00000635751 EEF2P13639 858 aaKnown RBP23.05■■□□□ 1.28
CLN8-208ENST00000635751 CATIPQ7Z7H3 387 aa23.05■■□□□ 1.28
CLN8-208ENST00000635751 MICU3Q86XE3 530 aa23.05■■□□□ 1.28
CLN8-208ENST00000635751 SIAH1Q8IUQ4 282 aa23.05■■□□□ 1.28
CLN8-208ENST00000635751 CCDC144CPQ8IYA2 1237 aa23.05■■□□□ 1.28
CLN8-208ENST00000635751 LEO1Q8WVC0 666 aaPredicted RBP23.05■■□□□ 1.28
CLN8-208ENST00000635751 ZKSCAN4Q969J2 545 aaPredicted RBP23.05■■□□□ 1.28
CLN8-208ENST00000635751 FUCA2Q9BTY2 467 aa23.05■■□□□ 1.28
CLN8-208ENST00000635751 CCDC39Q9UFE4 941 aa23.05■■□□□ 1.28
CLN8-208ENST00000635751 GOLGA6L4A6NEF3 574 aa23.05■■□□□ 1.28
CLN8-208ENST00000635751 CTDNEP1O95476 244 aa23.05■■□□□ 1.28
CLN8-208ENST00000635751 ASNSP08243 561 aa23.05■■□□□ 1.28
CLN8-208ENST00000635751 TOP1P11387 765 aaKnown RBP23.05■■□□□ 1.28
CLN8-208ENST00000635751 ICA1Q05084 483 aa23.05■■□□□ 1.28
CLN8-208ENST00000635751 PNMA1Q8ND90 353 aa23.05■■□□□ 1.28
CLN8-208ENST00000635751 NUP133Q8WUM0 1156 aa23.05■■□□□ 1.28
CLN8-208ENST00000635751 NCOA5Q9HCD5 579 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms